RNA–Protein interactions for RNA: ENST00000605852.1

FOCAD-217, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-217ENST00000605852 MKRN1Q9UHC7 482 aaKnown RBP8.77□□□□□ -1.01
FOCAD-217ENST00000605852 UNCXA6NJT0 531 aa8.76□□□□□ -1.01
FOCAD-217ENST00000605852 SSFA2P28290 1259 aa8.76□□□□□ -1.01
FOCAD-217ENST00000605852 PUS10Q3MIT2 529 aaKnown RBP8.76□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L15C9J2P7 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L10C9JJH3 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L13C9JLJ4 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L11C9JVI0 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L21D6R901 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L18D6R9N7 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L22D6RA61 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L17D6RBQ6 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L19D6RCP7 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L20D6RJB6 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 ERCC3P19447 782 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 USP17L24Q0WX57 530 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 FAM200AQ8TCP9 573 aa8.75□□□□□ -1.01
FOCAD-217ENST00000605852 ZC3H4Q9UPT8 1303 aaKnown RBP8.75□□□□□ -1.01
FOCAD-217ENST00000605852 ARHGAP33O14559 1287 aa8.74□□□□□ -1.01
FOCAD-217ENST00000605852 ACTN4O43707 911 aaKnown RBP8.74□□□□□ -1.01
FOCAD-217ENST00000605852 RASA1P20936 1047 aa8.74□□□□□ -1.01
FOCAD-217ENST00000605852 CRTC2Q53ET0 693 aaPredicted RBP8.74□□□□□ -1.01
FOCAD-217ENST00000605852 MAMSTRQ6ZN01 415 aa8.74□□□□□ -1.01
FOCAD-217ENST00000605852 LAPTM4BQ86VI4 370 aa8.74□□□□□ -1.01
FOCAD-217ENST00000605852 FAM174AQ8TBP5 190 aa8.74□□□□□ -1.01
FOCAD-217ENST00000605852 CDCA7Q9BWT1 371 aaPredicted RBP8.74□□□□□ -1.01
FOCAD-217ENST00000605852 ATP5J2-PTCD1G3V325 749 aa8.73□□□□□ -1.01
FOCAD-217ENST00000605852 SLFNL1Q499Z3 407 aa8.73□□□□□ -1.01
FOCAD-217ENST00000605852 ZNF592Q92610 1267 aa8.73□□□□□ -1.01
FOCAD-217ENST00000605852 USB1Q9BQ65 265 aaKnown RBP8.73□□□□□ -1.01
FOCAD-217ENST00000605852 PTK7Q13308 1070 aa8.72□□□□□ -1.01
FOCAD-217ENST00000605852 RNF19BQ6ZMZ0 732 aa8.72□□□□□ -1.01
FOCAD-217ENST00000605852 CLP1Q92989 425 aaKnown RBP8.72□□□□□ -1.01
FOCAD-217ENST00000605852 CEP126Q9P2H0 1117 aa8.72□□□□□ -1.01
FOCAD-217ENST00000605852 SOWAHDA6NJG2 315 aa8.71□□□□□ -1.02
FOCAD-217ENST00000605852 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.02
FOCAD-217ENST00000605852 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.02
FOCAD-217ENST00000605852 FAM69CQ0P6D2 419 aa8.71□□□□□ -1.02
FOCAD-217ENST00000605852 NCOA4Q13772 614 aa8.71□□□□□ -1.02
FOCAD-217ENST00000605852 DNAJC14Q6Y2X3 702 aaPredicted RBP8.71□□□□□ -1.02
FOCAD-217ENST00000605852 NBPF3Q9H094 633 aa8.71□□□□□ -1.02
FOCAD-217ENST00000605852 POTEB2H3BUK9 544 aa8.7□□□□□ -1.02
FOCAD-217ENST00000605852 MCCD1P59942 119 aaPredicted RBP8.7□□□□□ -1.02
FOCAD-217ENST00000605852 DMRTA1Q5VZB9 504 aa8.7□□□□□ -1.02
FOCAD-217ENST00000605852 BLOC1S3Q6QNY0 202 aa8.7□□□□□ -1.02
FOCAD-217ENST00000605852 RNF135Q8IUD6 432 aa8.7□□□□□ -1.02
FOCAD-217ENST00000605852 ANKMY2Q8IV38 441 aa8.7□□□□□ -1.02
FOCAD-217ENST00000605852 PRR14Q9BWN1 585 aa8.7□□□□□ -1.02
FOCAD-217ENST00000605852 SLAIN2Q9P270 581 aa8.7□□□□□ -1.02
FOCAD-217ENST00000605852 MAP10Q9P2G4 905 aa8.7□□□□□ -1.02
FOCAD-217ENST00000605852 VPS9D1Q9Y2B5 631 aa8.7□□□□□ -1.02
FOCAD-217ENST00000605852 ATP2B4P23634 1241 aa8.69□□□□□ -1.02
FOCAD-217ENST00000605852 CTHP32929 405 aa8.69□□□□□ -1.02
FOCAD-217ENST00000605852 PTK2Q05397 1052 aa8.69□□□□□ -1.02
FOCAD-217ENST00000605852 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
FOCAD-217ENST00000605852 ZFRQ96KR1 1074 aaKnown RBP8.69□□□□□ -1.02
FOCAD-217ENST00000605852 USP35Q9P2H5 1018 aa8.69□□□□□ -1.02
FOCAD-217ENST00000605852 SALL2Q9Y467 1007 aaPredicted RBP8.69□□□□□ -1.02
FOCAD-217ENST00000605852 GPSM3Q9Y4H4 160 aa8.69□□□□□ -1.02
FOCAD-217ENST00000605852 SERPINB4P48594 390 aa8.68□□□□□ -1.02
FOCAD-217ENST00000605852 MARSP56192 900 aaKnown RBP8.68□□□□□ -1.02
FOCAD-217ENST00000605852 PTPRNQ16849 979 aa8.68□□□□□ -1.02
FOCAD-217ENST00000605852 PLPP7Q8NBV4 271 aa8.68□□□□□ -1.02
FOCAD-217ENST00000605852 SIRT1Q96EB6 747 aa8.68□□□□□ -1.02
FOCAD-217ENST00000605852 AXIN2Q9Y2T1 843 aa8.68□□□□□ -1.02
FOCAD-217ENST00000605852 PCDHB9Q9Y5E1 797 aa8.68□□□□□ -1.02
FOCAD-217ENST00000605852 DPYDQ12882 1025 aa8.67□□□□□ -1.02
FOCAD-217ENST00000605852 SWI5Q1ZZU3 235 aa8.67□□□□□ -1.02
FOCAD-217ENST00000605852 EML3Q32P44 896 aa8.67□□□□□ -1.02
FOCAD-217ENST00000605852 PDXDC2PQ6P474 469 aa8.67□□□□□ -1.02
FOCAD-217ENST00000605852 PHTF2Q8N3S3 785 aa8.67□□□□□ -1.02
FOCAD-217ENST00000605852 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
FOCAD-217ENST00000605852 MRRFQ96E11 262 aaKnown RBP8.67□□□□□ -1.02
FOCAD-217ENST00000605852 BIN2Q9UBW5 565 aaPredicted RBP8.67□□□□□ -1.02
FOCAD-217ENST00000605852 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
FOCAD-217ENST00000605852 JUNDP17535 347 aa8.66□□□□□ -1.02
FOCAD-217ENST00000605852 MAP7D1Q3KQU3 841 aa8.66□□□□□ -1.02
FOCAD-217ENST00000605852 POTEEQ6S8J3 1075 aa8.66□□□□□ -1.02
FOCAD-217ENST00000605852 OGFOD1Q8N543 542 aa8.66□□□□□ -1.02
FOCAD-217ENST00000605852 LRCH3Q96II8 777 aa8.66□□□□□ -1.02
FOCAD-217ENST00000605852 BCL2L13Q9BXK5 485 aa8.66□□□□□ -1.02
FOCAD-217ENST00000605852 IGSF5Q9NSI5 407 aa8.66□□□□□ -1.02
FOCAD-217ENST00000605852 KIAA1522Q9P206 1035 aaPredicted RBP8.66□□□□□ -1.02
FOCAD-217ENST00000605852 ZNF16P17020 682 aaPredicted RBP8.65□□□□□ -1.02
FOCAD-217ENST00000605852 KCNH2Q12809 1159 aa8.65□□□□□ -1.02
FOCAD-217ENST00000605852 TRIM50Q86XT4 487 aa8.65□□□□□ -1.02
FOCAD-217ENST00000605852 SCUBE3Q8IX30 993 aa8.65□□□□□ -1.02
FOCAD-217ENST00000605852 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.02
FOCAD-217ENST00000605852 ERBB3P21860 1342 aa8.64□□□□□ -1.03
FOCAD-217ENST00000605852 PBX2P40425 430 aa8.64□□□□□ -1.03
FOCAD-217ENST00000605852 ATP1A2P50993 1020 aa8.64□□□□□ -1.03
FOCAD-217ENST00000605852 ZNF594Q96JF6 807 aaPredicted RBP8.64□□□□□ -1.03
FOCAD-217ENST00000605852 DNAAF2Q9NVR5 837 aaKnown RBP8.64□□□□□ -1.03
FOCAD-217ENST00000605852 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.64□□□□□ -1.03
FOCAD-217ENST00000605852 BHMG1C9JSJ3 638 aaPredicted RBP8.63□□□□□ -1.03
FOCAD-217ENST00000605852 NR1I2O75469 434 aa8.63□□□□□ -1.03
FOCAD-217ENST00000605852 NOM1Q5C9Z4 860 aaKnown RBP8.63□□□□□ -1.03
FOCAD-217ENST00000605852 VARS2Q5ST30 1063 aaKnown RBP8.63□□□□□ -1.03
FOCAD-217ENST00000605852 MRPL50Q8N5N7 158 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms