RNA–Protein interactions for RNA: ENST00000605852.1

FOCAD-217, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-217ENST00000605852 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
FOCAD-217ENST00000605852 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
FOCAD-217ENST00000605852 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
FOCAD-217ENST00000605852 PLPPR3Q6T4P5 718 aa15.96■□□□□ 0.15
FOCAD-217ENST00000605852 SENP3Q9H4L4 574 aaPredicted RBP15.85■□□□□ 0.13
FOCAD-217ENST00000605852 ADRA2BP18089 450 aa14.92□□□□□ -0.02
FOCAD-217ENST00000605852 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
FOCAD-217ENST00000605852 KCNA4P22459 653 aa14.78□□□□□ -0.04
FOCAD-217ENST00000605852 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
FOCAD-217ENST00000605852 FOXD1Q16676 465 aa14.61□□□□□ -0.07
FOCAD-217ENST00000605852 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
FOCAD-217ENST00000605852 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
FOCAD-217ENST00000605852 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
FOCAD-217ENST00000605852 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
FOCAD-217ENST00000605852 PIAS4Q8N2W9 510 aaPredicted RBP13.99□□□□□ -0.17
FOCAD-217ENST00000605852 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.2
FOCAD-217ENST00000605852 ZBTB22O15209 634 aa13.59□□□□□ -0.23
FOCAD-217ENST00000605852 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
FOCAD-217ENST00000605852 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
FOCAD-217ENST00000605852 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
FOCAD-217ENST00000605852 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
FOCAD-217ENST00000605852 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
FOCAD-217ENST00000605852 MSH5O43196 834 aa13.15□□□□□ -0.3
FOCAD-217ENST00000605852 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
FOCAD-217ENST00000605852 RTN4Q9NQC3 1192 aaKnown RBP13.12□□□□□ -0.31
FOCAD-217ENST00000605852 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
FOCAD-217ENST00000605852 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
FOCAD-217ENST00000605852 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
FOCAD-217ENST00000605852 HOXD11P31277 338 aaPredicted RBP12.83□□□□□ -0.36
FOCAD-217ENST00000605852 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
FOCAD-217ENST00000605852 FKBP8Q14318 412 aa12.81□□□□□ -0.36
FOCAD-217ENST00000605852 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
FOCAD-217ENST00000605852 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
FOCAD-217ENST00000605852 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
FOCAD-217ENST00000605852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
FOCAD-217ENST00000605852 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
FOCAD-217ENST00000605852 SAMD1Q6SPF0 538 aaPredicted RBP12.28□□□□□ -0.44
FOCAD-217ENST00000605852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.28□□□□□ -0.44
FOCAD-217ENST00000605852 DCAF8L1A6NGE4 600 aa12.23□□□□□ -0.45
FOCAD-217ENST00000605852 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
FOCAD-217ENST00000605852 U3KPZ7 1027 aaPredicted RBP12.13□□□□□ -0.47
FOCAD-217ENST00000605852 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
FOCAD-217ENST00000605852 PLCB2Q00722 1185 aa12.07□□□□□ -0.48
FOCAD-217ENST00000605852 SPDYE4A6NLX3 237 aa12.02□□□□□ -0.49
FOCAD-217ENST00000605852 APLP2Q06481 763 aa11.96□□□□□ -0.49
FOCAD-217ENST00000605852 VASPP50552 380 aaPredicted RBP11.93□□□□□ -0.5
FOCAD-217ENST00000605852 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
FOCAD-217ENST00000605852 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
FOCAD-217ENST00000605852 PROM2Q8N271 834 aa11.88□□□□□ -0.51
FOCAD-217ENST00000605852 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
FOCAD-217ENST00000605852 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.52
FOCAD-217ENST00000605852 BCANQ96GW7 911 aa11.82□□□□□ -0.52
FOCAD-217ENST00000605852 FBLN2P98095 1184 aa11.81□□□□□ -0.52
FOCAD-217ENST00000605852 POTEDQ86YR6 584 aa11.81□□□□□ -0.52
FOCAD-217ENST00000605852 VSIG10Q8N0Z9 540 aa11.76□□□□□ -0.53
FOCAD-217ENST00000605852 PKD2Q13563 968 aa11.75□□□□□ -0.53
FOCAD-217ENST00000605852 PRKCSHP14314 528 aaPredicted RBP11.68□□□□□ -0.54
FOCAD-217ENST00000605852 TAOK2Q9UL54 1235 aa11.66□□□□□ -0.54
FOCAD-217ENST00000605852 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
FOCAD-217ENST00000605852 POLA2Q14181 598 aa11.64□□□□□ -0.55
FOCAD-217ENST00000605852 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
FOCAD-217ENST00000605852 BBXQ8WY36 941 aaPredicted RBP11.6□□□□□ -0.55
FOCAD-217ENST00000605852 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
FOCAD-217ENST00000605852 SPOCK2Q92563 424 aa11.57□□□□□ -0.56
FOCAD-217ENST00000605852 SPINK5Q9NQ38 1064 aaPredicted RBP11.56□□□□□ -0.56
FOCAD-217ENST00000605852 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
FOCAD-217ENST00000605852 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
FOCAD-217ENST00000605852 KDM2AQ9Y2K7 1162 aa11.54□□□□□ -0.56
FOCAD-217ENST00000605852 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
FOCAD-217ENST00000605852 CAPN15O75808 1086 aa11.5□□□□□ -0.57
FOCAD-217ENST00000605852 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
FOCAD-217ENST00000605852 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
FOCAD-217ENST00000605852 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
FOCAD-217ENST00000605852 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
FOCAD-217ENST00000605852 SPRYD3Q8NCJ5 442 aa11.42□□□□□ -0.58
FOCAD-217ENST00000605852 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
FOCAD-217ENST00000605852 RGL2O15211 777 aa11.39□□□□□ -0.59
FOCAD-217ENST00000605852 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
FOCAD-217ENST00000605852 TSHZ2Q9NRE2 1034 aa11.36□□□□□ -0.59
FOCAD-217ENST00000605852 ABCB7O75027 752 aa11.35□□□□□ -0.59
FOCAD-217ENST00000605852 RNF39Q9H2S5 420 aa11.34□□□□□ -0.59
FOCAD-217ENST00000605852 MIER1Q8N108 512 aa11.33□□□□□ -0.6
FOCAD-217ENST00000605852 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
FOCAD-217ENST00000605852 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
FOCAD-217ENST00000605852 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
FOCAD-217ENST00000605852 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
FOCAD-217ENST00000605852 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
FOCAD-217ENST00000605852 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
FOCAD-217ENST00000605852 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
FOCAD-217ENST00000605852 NBR1Q14596 966 aa11.22□□□□□ -0.61
FOCAD-217ENST00000605852 PABPN1Q86U42 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
FOCAD-217ENST00000605852 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
FOCAD-217ENST00000605852 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
FOCAD-217ENST00000605852 OSCARQ8IYS5 282 aa11.18□□□□□ -0.62
FOCAD-217ENST00000605852 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
FOCAD-217ENST00000605852 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
FOCAD-217ENST00000605852 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
FOCAD-217ENST00000605852 DSG3P32926 999 aa11.08□□□□□ -0.64
FOCAD-217ENST00000605852 GSE1Q14687 1217 aa11.04□□□□□ -0.64
FOCAD-217ENST00000605852 RNF25Q96BH1 459 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms