RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 ATRNO75882 1429 aa24.89■■□□□ 1.58
IRF3-230ENST00000601809 PHRF1Q9P1Y6 1649 aaKnown RBP24.89■■□□□ 1.57
IRF3-230ENST00000601809 SSH2Q76I76 1423 aa24.88■■□□□ 1.57
IRF3-230ENST00000601809 PLCH1Q4KWH8 1693 aa24.88■■□□□ 1.57
IRF3-230ENST00000601809 AKAP12Q02952 1782 aa24.88■■□□□ 1.57
IRF3-230ENST00000601809 TESK2Q96S53 571 aa24.86■■□□□ 1.57
IRF3-230ENST00000601809 QTRT2Q9H974 415 aaKnown RBP24.86■■□□□ 1.57
IRF3-230ENST00000601809 CABP1Q9NZU7 370 aa24.86■■□□□ 1.57
IRF3-230ENST00000601809 NWD2Q9ULI1 1742 aa24.86■■□□□ 1.57
IRF3-230ENST00000601809 USP6P35125 1406 aa24.86■■□□□ 1.57
IRF3-230ENST00000601809 BRD4O60885 1362 aaPredicted RBP24.85■■□□□ 1.57
IRF3-230ENST00000601809 LMOD2Q6P5Q4 547 aa24.85■■□□□ 1.57
IRF3-230ENST00000601809 USP21Q9UK80 565 aa24.85■■□□□ 1.57
IRF3-230ENST00000601809 RXRBP28702 533 aa24.84■■□□□ 1.57
IRF3-230ENST00000601809 NRKQ7Z2Y5 1582 aa24.84■■□□□ 1.57
IRF3-230ENST00000601809 ATAD2Q6PL18 1390 aa24.83■■□□□ 1.57
IRF3-230ENST00000601809 CPSF1Q10570 1443 aaKnown RBP24.83■■□□□ 1.57
IRF3-230ENST00000601809 NRAPQ86VF7 1730 aa24.82■■□□□ 1.56
IRF3-230ENST00000601809 RGS12O14924 1447 aa24.81■■□□□ 1.56
IRF3-230ENST00000601809 PAK3O75914 559 aaPredicted RBP24.81■■□□□ 1.56
IRF3-230ENST00000601809 RBM6P78332 1123 aaKnown RBP24.81■■□□□ 1.56
IRF3-230ENST00000601809 CD163L1Q9NR16 1453 aa24.81■■□□□ 1.56
IRF3-230ENST00000601809 COL14A1Q05707 1796 aaKnown RBP24.8■■□□□ 1.56
IRF3-230ENST00000601809 ST20-MTHFSA0A0A6YYL1 179 aa24.8■■□□□ 1.56
IRF3-230ENST00000601809 TRPC5Q9UL62 973 aaPredicted RBP24.8■■□□□ 1.56
IRF3-230ENST00000601809 PIK3C2AO00443 1686 aa24.8■■□□□ 1.56
IRF3-230ENST00000601809 MON2Q7Z3U7 1717 aa24.8■■□□□ 1.56
IRF3-230ENST00000601809 USP19O94966 1318 aa24.8■■□□□ 1.56
IRF3-230ENST00000601809 FAM83GA6ND36 823 aa24.79■■□□□ 1.56
IRF3-230ENST00000601809 GLI3P10071 1580 aa24.79■■□□□ 1.56
IRF3-230ENST00000601809 CCER1Q8TC90 406 aaPredicted RBP24.78■■□□□ 1.56
IRF3-230ENST00000601809 PUS7Q96PZ0 661 aaKnown RBP24.78■■□□□ 1.56
IRF3-230ENST00000601809 USP47Q96K76 1375 aa24.78■■□□□ 1.56
IRF3-230ENST00000601809 UNC5CLQ8IV45 518 aa24.77■■□□□ 1.56
IRF3-230ENST00000601809 PLEKHG5O94827 1062 aa24.76■■□□□ 1.55
IRF3-230ENST00000601809 HAP1P54257 671 aaPredicted RBP24.75■■□□□ 1.55
IRF3-230ENST00000601809 SLIT3O75094 1523 aa24.75■■□□□ 1.55
IRF3-230ENST00000601809 NUTM2GQ5VZR2 741 aa24.73■■□□□ 1.55
IRF3-230ENST00000601809 ABTB2Q8N961 1025 aa24.73■■□□□ 1.55
IRF3-230ENST00000601809 ZNF692Q9BU19 519 aaPredicted RBP24.73■■□□□ 1.55
IRF3-230ENST00000601809 USP54Q70EL1 1684 aa24.72■■□□□ 1.55
IRF3-230ENST00000601809 LMO7Q8WWI1 1683 aa24.72■■□□□ 1.55
IRF3-230ENST00000601809 GJD4Q96KN9 370 aaPredicted RBP24.71■■□□□ 1.55
IRF3-230ENST00000601809 KIAA0232Q92628 1395 aa24.7■■□□□ 1.55
IRF3-230ENST00000601809 TTC21BQ7Z4L5 1316 aa24.7■■□□□ 1.54
IRF3-230ENST00000601809 VPS72Q15906 364 aa24.7■■□□□ 1.54
IRF3-230ENST00000601809 CPDO75976 1380 aa24.69■■□□□ 1.54
IRF3-230ENST00000601809 NLRP13Q86W25 1043 aa24.68■■□□□ 1.54
IRF3-230ENST00000601809 SLC12A5Q9H2X9 1139 aa24.68■■□□□ 1.54
IRF3-230ENST00000601809 KTN1Q86UP2 1357 aaKnown RBP24.67■■□□□ 1.54
IRF3-230ENST00000601809 TTC21AQ8NDW8 1320 aa24.66■■□□□ 1.54
IRF3-230ENST00000601809 SLC24A1O60721 1099 aa24.66■■□□□ 1.54
IRF3-230ENST00000601809 BTG4Q9NY30 223 aa24.66■■□□□ 1.54
IRF3-230ENST00000601809 GCP02774 474 aa24.65■■□□□ 1.54
IRF3-230ENST00000601809 PRDM11Q9NQV5 511 aa24.65■■□□□ 1.54
IRF3-230ENST00000601809 A0A1W2PP64 1363 aa24.65■■□□□ 1.54
IRF3-230ENST00000601809 NINLQ9Y2I6 1382 aa24.65■■□□□ 1.54
IRF3-230ENST00000601809 ZC3H6P61129 1189 aaKnown RBP24.64■■□□□ 1.54
IRF3-230ENST00000601809 CAMTA1Q9Y6Y1 1673 aa24.64■■□□□ 1.53
IRF3-230ENST00000601809 COL18A1P39060 1754 aa24.64■■□□□ 1.53
IRF3-230ENST00000601809 EDC4Q6P2E9 1401 aaKnown RBP24.62■■□□□ 1.53
IRF3-230ENST00000601809 NFAT5O94916 1531 aa24.62■■□□□ 1.53
IRF3-230ENST00000601809 ONECUT3O60422 494 aaPredicted RBP24.62■■□□□ 1.53
IRF3-230ENST00000601809 NLRP6P59044 892 aa24.62■■□□□ 1.53
IRF3-230ENST00000601809 CHRNA2Q15822 529 aa24.62■■□□□ 1.53
IRF3-230ENST00000601809 BRWD3Q6RI45 1802 aa24.62■■□□□ 1.53
IRF3-230ENST00000601809 USP31Q70CQ4 1352 aa24.62■■□□□ 1.53
IRF3-230ENST00000601809 MYOM1P52179 1685 aa24.62■■□□□ 1.53
IRF3-230ENST00000601809 EP400Q96L91 3159 aa24.61■■□□□ 1.53
IRF3-230ENST00000601809 TMC1Q8TDI8 760 aa24.6■■□□□ 1.53
IRF3-230ENST00000601809 UPF1Q92900 1129 aaKnown RBP eCLIP24.6■■□□□ 1.53
IRF3-230ENST00000601809 TMF1P82094 1093 aa24.59■■□□□ 1.53
IRF3-230ENST00000601809 THSD7AQ9UPZ6 1657 aa24.58■■□□□ 1.53
IRF3-230ENST00000601809 SPATA31A5Q5VU36 1347 aa24.58■■□□□ 1.52
IRF3-230ENST00000601809 SPATA31A7Q8IWB4 1347 aa24.58■■□□□ 1.52
IRF3-230ENST00000601809 ZRANB1Q9UGI0 708 aa24.57■■□□□ 1.52
IRF3-230ENST00000601809 OVOS2A0A0J9YW53 1432 aa24.56■■□□□ 1.52
IRF3-230ENST00000601809 OVOS2Q6IE36 1432 aa24.56■■□□□ 1.52
IRF3-230ENST00000601809 HDGFL2Q7Z4V5 671 aaPredicted RBP24.56■■□□□ 1.52
IRF3-230ENST00000601809 TERF2IPQ9NYB0 399 aa24.56■■□□□ 1.52
IRF3-230ENST00000601809 AATKQ6ZMQ8 1374 aa24.55■■□□□ 1.52
IRF3-230ENST00000601809 ANKRD36BQ8N2N9 1353 aa24.55■■□□□ 1.52
IRF3-230ENST00000601809 COL5A2P05997 1499 aaPredicted RBP24.55■■□□□ 1.52
IRF3-230ENST00000601809 NME9Q86XW9 330 aa24.54■■□□□ 1.52
IRF3-230ENST00000601809 ARHGEF25Q86VW2 580 aa24.53■■□□□ 1.52
IRF3-230ENST00000601809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.53■■□□□ 1.52
IRF3-230ENST00000601809 SPATA31A1Q5TZJ5 1347 aa24.53■■□□□ 1.52
IRF3-230ENST00000601809 SEPT12Q8IYM1 358 aa24.52■■□□□ 1.52
IRF3-230ENST00000601809 ABCC6O95255 1503 aa24.51■■□□□ 1.51
IRF3-230ENST00000601809 RGPD5Q99666 1765 aa24.51■■□□□ 1.51
IRF3-230ENST00000601809 KCNH5Q8NCM2 988 aa24.5■■□□□ 1.51
IRF3-230ENST00000601809 CCDC9Q9Y3X0 531 aaKnown RBP24.5■■□□□ 1.51
IRF3-230ENST00000601809 HSPA5P11021 654 aaKnown RBP24.49■■□□□ 1.51
IRF3-230ENST00000601809 CDCA8Q53HL2 280 aa24.49■■□□□ 1.51
IRF3-230ENST00000601809 FAM98CQ17RN3 349 aaKnown RBP24.48■■□□□ 1.51
IRF3-230ENST00000601809 AXIN2Q9Y2T1 843 aa24.48■■□□□ 1.51
IRF3-230ENST00000601809 LTN1O94822 1766 aa24.47■■□□□ 1.51
IRF3-230ENST00000601809 EIF4G2P78344 907 aaKnown RBP eCLIP24.47■■□□□ 1.51
IRF3-230ENST00000601809 LARP1Q6PKG0 1096 aaKnown RBP24.47■■□□□ 1.51
IRF3-230ENST00000601809 STRN4Q9NRL3 753 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms