RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 FHAD1B1AJZ9 1412 aa12.65□□□□□ -0.38
LINC00343-207ENST00000599179 TTC24A2A3L6 582 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-207ENST00000599179 POTECB2RU33 542 aa12.64□□□□□ -0.39
LINC00343-207ENST00000599179 WNT7AO00755 349 aa12.64□□□□□ -0.39
LINC00343-207ENST00000599179 DXOO77932 396 aaKnown RBP12.64□□□□□ -0.39
LINC00343-207ENST00000599179 TRIM32Q13049 653 aa12.64□□□□□ -0.39
LINC00343-207ENST00000599179 AXIN1O15169 862 aa12.63□□□□□ -0.39
LINC00343-207ENST00000599179 CLCN1P35523 988 aa12.63□□□□□ -0.39
LINC00343-207ENST00000599179 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
LINC00343-207ENST00000599179 GPCPD1Q9NPB8 672 aa12.63□□□□□ -0.39
LINC00343-207ENST00000599179 HOXA2O43364 376 aa12.62□□□□□ -0.39
LINC00343-207ENST00000599179 SMCPP49901 116 aaPredicted RBP12.62□□□□□ -0.39
LINC00343-207ENST00000599179 REPIN1Q9BWE0 567 aaKnown RBP12.61□□□□□ -0.39
LINC00343-207ENST00000599179 SNIP1Q8TAD8 396 aaKnown RBP12.6□□□□□ -0.39
LINC00343-207ENST00000599179 FBXO41Q8TF61 875 aa12.6□□□□□ -0.39
LINC00343-207ENST00000599179 ADCY10Q96PN6 1610 aa12.59□□□□□ -0.39
LINC00343-207ENST00000599179 KRI1Q8N9T8 703 aaKnown RBP12.59□□□□□ -0.39
LINC00343-207ENST00000599179 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
LINC00343-207ENST00000599179 FAM217BQ9NTX9 383 aaPredicted RBP12.57□□□□□ -0.4
LINC00343-207ENST00000599179 TSPOAP1O95153 1857 aa12.56□□□□□ -0.4
LINC00343-207ENST00000599179 WNT7BP56706 349 aa12.55□□□□□ -0.4
LINC00343-207ENST00000599179 NUTM1Q86Y26 1132 aa12.55□□□□□ -0.4
LINC00343-207ENST00000599179 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
LINC00343-207ENST00000599179 HLA-CQ95604 372 aa12.54□□□□□ -0.4
LINC00343-207ENST00000599179 MRGPRX2Q96LB1 330 aa12.54□□□□□ -0.4
LINC00343-207ENST00000599179 JUNDP17535 347 aa12.53□□□□□ -0.4
LINC00343-207ENST00000599179 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.4
LINC00343-207ENST00000599179 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.41
LINC00343-207ENST00000599179 SMPD1P17405 629 aa12.52□□□□□ -0.41
LINC00343-207ENST00000599179 TREML4Q6UXN2 200 aa12.52□□□□□ -0.41
LINC00343-207ENST00000599179 DACH1Q9UI36 760 aa12.52□□□□□ -0.41
LINC00343-207ENST00000599179 COL17A1Q9UMD9 1497 aaPredicted RBP12.52□□□□□ -0.41
LINC00343-207ENST00000599179 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.41
LINC00343-207ENST00000599179 RETREG3Q86VR2 466 aa12.51□□□□□ -0.41
LINC00343-207ENST00000599179 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
LINC00343-207ENST00000599179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00343-207ENST00000599179 GUCA2AQ02747 115 aa12.48□□□□□ -0.41
LINC00343-207ENST00000599179 RC3H1Q5TC82 1133 aaKnown RBP12.48□□□□□ -0.41
LINC00343-207ENST00000599179 TTBK1Q5TCY1 1321 aaPredicted RBP12.46□□□□□ -0.41
LINC00343-207ENST00000599179 J3QL48 77 aa12.46□□□□□ -0.41
LINC00343-207ENST00000599179 FDX1P10109 184 aa12.46□□□□□ -0.41
LINC00343-207ENST00000599179 NUDT12Q9BQG2 462 aa12.46□□□□□ -0.41
LINC00343-207ENST00000599179 SENP2Q9HC62 589 aa12.46□□□□□ -0.41
LINC00343-207ENST00000599179 ASXL2Q76L83 1435 aa12.45□□□□□ -0.42
LINC00343-207ENST00000599179 ATP13A2Q9NQ11 1180 aa12.45□□□□□ -0.42
LINC00343-207ENST00000599179 LMTK3Q96Q04 1460 aa12.45□□□□□ -0.42
LINC00343-207ENST00000599179 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
LINC00343-207ENST00000599179 SKOR1P84550 965 aa12.44□□□□□ -0.42
LINC00343-207ENST00000599179 LCE2AQ5TA79 106 aaPredicted RBP12.44□□□□□ -0.42
LINC00343-207ENST00000599179 PTPRGP23470 1445 aa12.44□□□□□ -0.42
LINC00343-207ENST00000599179 PLB1Q6P1J6 1458 aa12.43□□□□□ -0.42
LINC00343-207ENST00000599179 SYMPKQ92797 1274 aaKnown RBP12.43□□□□□ -0.42
LINC00343-207ENST00000599179 GLI2P10070 1586 aa12.43□□□□□ -0.42
LINC00343-207ENST00000599179 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
LINC00343-207ENST00000599179 C6orf229H3BNL8 230 aa12.42□□□□□ -0.42
LINC00343-207ENST00000599179 SSTR3P32745 418 aaPredicted RBP12.42□□□□□ -0.42
LINC00343-207ENST00000599179 WFS1O76024 890 aa12.41□□□□□ -0.42
LINC00343-207ENST00000599179 MS4A1P11836 297 aa12.41□□□□□ -0.42
LINC00343-207ENST00000599179 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
LINC00343-207ENST00000599179 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
LINC00343-207ENST00000599179 KIAA0586Q9BVV6 1533 aa12.41□□□□□ -0.42
LINC00343-207ENST00000599179 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
LINC00343-207ENST00000599179 CCNYL3P0C7X3 344 aa12.4□□□□□ -0.42
LINC00343-207ENST00000599179 HPS1Q92902 700 aa12.4□□□□□ -0.42
LINC00343-207ENST00000599179 TRIM47Q96LD4 638 aa12.4□□□□□ -0.42
LINC00343-207ENST00000599179 AMHR2Q16671 573 aa12.39□□□□□ -0.43
LINC00343-207ENST00000599179 PTPRNQ16849 979 aa12.39□□□□□ -0.43
LINC00343-207ENST00000599179 BARGINQ6ZT62 677 aa12.39□□□□□ -0.43
LINC00343-207ENST00000599179 EHBP1Q8NDI1 1231 aa12.39□□□□□ -0.43
LINC00343-207ENST00000599179 SPIRE2Q8WWL2 714 aa12.39□□□□□ -0.43
LINC00343-207ENST00000599179 PCDHGC3Q9UN70 934 aa12.39□□□□□ -0.43
LINC00343-207ENST00000599179 ALDH1A1P00352 501 aa12.38□□□□□ -0.43
LINC00343-207ENST00000599179 BIVM-ERCC5R4GMW8 1640 aa12.37□□□□□ -0.43
LINC00343-207ENST00000599179 SPDYE5A6NIY4 337 aa12.37□□□□□ -0.43
LINC00343-207ENST00000599179 EPRSP07814 1512 aaKnown RBP12.37□□□□□ -0.43
LINC00343-207ENST00000599179 TEX14Q8IWB6 1497 aa12.36□□□□□ -0.43
LINC00343-207ENST00000599179 ZMYND10O75800 440 aa12.36□□□□□ -0.43
LINC00343-207ENST00000599179 TNIKQ9UKE5 1360 aa12.35□□□□□ -0.43
LINC00343-207ENST00000599179 DIXDC1Q155Q3 683 aa12.35□□□□□ -0.43
LINC00343-207ENST00000599179 PTCRAQ6ISU1 281 aaPredicted RBP12.35□□□□□ -0.43
LINC00343-207ENST00000599179 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
LINC00343-207ENST00000599179 DESI1Q6ICB0 168 aa12.34□□□□□ -0.43
LINC00343-207ENST00000599179 ILDR2Q71H61 639 aa12.34□□□□□ -0.43
LINC00343-207ENST00000599179 WASF2Q9Y6W5 498 aa12.34□□□□□ -0.43
LINC00343-207ENST00000599179 SOCS7O14512 581 aa12.33□□□□□ -0.44
LINC00343-207ENST00000599179 SIAH2O43255 324 aa12.33□□□□□ -0.44
LINC00343-207ENST00000599179 GJA5P36382 358 aa12.33□□□□□ -0.44
LINC00343-207ENST00000599179 MTMR2Q13614 643 aa12.33□□□□□ -0.44
LINC00343-207ENST00000599179 GIGYF2Q6Y7W6 1299 aaKnown RBP12.33□□□□□ -0.44
LINC00343-207ENST00000599179 EVA1BQ9NVM1 165 aa12.33□□□□□ -0.44
LINC00343-207ENST00000599179 MOXD2PA6NHM9 499 aa12.32□□□□□ -0.44
LINC00343-207ENST00000599179 SNRPBP14678 240 aaKnown RBP12.32□□□□□ -0.44
LINC00343-207ENST00000599179 UNC93B1Q9H1C4 597 aa12.32□□□□□ -0.44
LINC00343-207ENST00000599179 MAP3K4Q9Y6R4 1608 aa12.32□□□□□ -0.44
LINC00343-207ENST00000599179 UHRF1BP1LA0JNW5 1464 aa12.32□□□□□ -0.44
LINC00343-207ENST00000599179 UACAQ9BZF9 1416 aa12.31□□□□□ -0.44
LINC00343-207ENST00000599179 NDUFV2P19404 249 aa12.31□□□□□ -0.44
LINC00343-207ENST00000599179 SH3BP2P78314 561 aa12.31□□□□□ -0.44
LINC00343-207ENST00000599179 PRR7Q8TB68 274 aa12.31□□□□□ -0.44
LINC00343-207ENST00000599179 CARMIL2Q6F5E8 1435 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms