RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 FAM196AQ6ZSG2 479 aa20.82■□□□□ 0.92
SHKBP1-218ENST00000598907 ZNF784Q8NCA9 323 aaPredicted RBP20.82■□□□□ 0.92
SHKBP1-218ENST00000598907 PMFBP1Q8TBY8 1022 aa20.82■□□□□ 0.92
SHKBP1-218ENST00000598907 TRPM3Q9HCF6 1732 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-218ENST00000598907 KCNQ2O43526 872 aa20.81■□□□□ 0.92
SHKBP1-218ENST00000598907 YTHDC2Q9H6S0 1430 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-218ENST00000598907 ALS2Q96Q42 1657 aa20.79■□□□□ 0.92
SHKBP1-218ENST00000598907 NRKQ7Z2Y5 1582 aa20.78■□□□□ 0.92
SHKBP1-218ENST00000598907 SAFB2Q14151 953 aaKnown RBP eCLIP20.78■□□□□ 0.92
SHKBP1-218ENST00000598907 CRYBG1Q9Y4K1 1723 aa20.78■□□□□ 0.92
SHKBP1-218ENST00000598907 PRDM11Q9NQV5 511 aa20.77■□□□□ 0.92
SHKBP1-218ENST00000598907 SPATA31A1Q5TZJ5 1347 aa20.77■□□□□ 0.91
SHKBP1-218ENST00000598907 STRN4Q9NRL3 753 aa20.76■□□□□ 0.91
SHKBP1-218ENST00000598907 RGL3Q3MIN7 710 aa20.75■□□□□ 0.91
SHKBP1-218ENST00000598907 USP35Q9P2H5 1018 aa20.75■□□□□ 0.91
SHKBP1-218ENST00000598907 PIK3C2GO75747 1445 aa20.73■□□□□ 0.91
SHKBP1-218ENST00000598907 MYOM1P52179 1685 aa20.73■□□□□ 0.91
SHKBP1-218ENST00000598907 PDE3BQ13370 1112 aa20.72■□□□□ 0.91
SHKBP1-218ENST00000598907 GPRASP1Q5JY77 1395 aa20.72■□□□□ 0.91
SHKBP1-218ENST00000598907 C1QTNF8P60827 252 aa20.71■□□□□ 0.91
SHKBP1-218ENST00000598907 CHRNA2Q15822 529 aa20.71■□□□□ 0.91
SHKBP1-218ENST00000598907 SLC4A1APQ9BWU0 796 aaKnown RBP20.71■□□□□ 0.91
SHKBP1-218ENST00000598907 ANKARQ7Z5J8 1434 aa20.7■□□□□ 0.9
SHKBP1-218ENST00000598907 KIAA0232Q92628 1395 aa20.7■□□□□ 0.9
SHKBP1-218ENST00000598907 ANKRD30BQ9BXX2 1392 aa20.7■□□□□ 0.9
SHKBP1-218ENST00000598907 PRAM1Q96QH2 718 aa20.69■□□□□ 0.9
SHKBP1-218ENST00000598907 CASZ1Q86V15 1759 aa20.69■□□□□ 0.9
SHKBP1-218ENST00000598907 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
SHKBP1-218ENST00000598907 PHRF1Q9P1Y6 1649 aaKnown RBP20.67■□□□□ 0.9
SHKBP1-218ENST00000598907 ACIN1Q9UKV3 1341 aaKnown RBP20.67■□□□□ 0.9
SHKBP1-218ENST00000598907 SPATA31E1Q6ZUB1 1445 aa20.66■□□□□ 0.9
SHKBP1-218ENST00000598907 ZBTB7AO95365 584 aa20.65■□□□□ 0.9
SHKBP1-218ENST00000598907 TRIM26Q12899 539 aaPredicted RBP20.65■□□□□ 0.9
SHKBP1-218ENST00000598907 ANO8Q9HCE9 1232 aaPredicted RBP20.65■□□□□ 0.9
SHKBP1-218ENST00000598907 PDGFDQ9GZP0 370 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-218ENST00000598907 SSH2Q76I76 1423 aa20.63■□□□□ 0.89
SHKBP1-218ENST00000598907 ZC3H6P61129 1189 aaKnown RBP20.63■□□□□ 0.89
SHKBP1-218ENST00000598907 SIRT1Q96EB6 747 aa20.63■□□□□ 0.89
SHKBP1-218ENST00000598907 HIRIP3Q9BW71 556 aaPredicted RBP20.63■□□□□ 0.89
SHKBP1-218ENST00000598907 POGKQ9P215 609 aa20.63■□□□□ 0.89
SHKBP1-218ENST00000598907 DHX57Q6P158 1386 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-218ENST00000598907 PRR36Q9H6K5 1346 aa20.61■□□□□ 0.89
SHKBP1-218ENST00000598907 EVA1CP58658 441 aa20.61■□□□□ 0.89
SHKBP1-218ENST00000598907 UTRNP46939 3433 aa20.61■□□□□ 0.89
SHKBP1-218ENST00000598907 CHD4Q14839 1912 aa20.61■□□□□ 0.89
SHKBP1-218ENST00000598907 RGPD3A6NKT7 1758 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-218ENST00000598907 RGPD4Q7Z3J3 1758 aa20.6■□□□□ 0.89
SHKBP1-218ENST00000598907 BARGINQ6ZT62 677 aa20.6■□□□□ 0.89
SHKBP1-218ENST00000598907 NGDNQ8NEJ9 315 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-218ENST00000598907 TULP4Q9NRJ4 1543 aa20.59■□□□□ 0.89
SHKBP1-218ENST00000598907 CFAP70Q5T0N1 1121 aa20.59■□□□□ 0.89
SHKBP1-218ENST00000598907 ATF5Q9Y2D1 282 aaPredicted RBP20.59■□□□□ 0.89
SHKBP1-218ENST00000598907 NUTM2GQ5VZR2 741 aa20.58■□□□□ 0.89
SHKBP1-218ENST00000598907 LARP1Q6PKG0 1096 aaKnown RBP20.58■□□□□ 0.89
SHKBP1-218ENST00000598907 FHDC1Q9C0D6 1143 aaPredicted RBP20.58■□□□□ 0.89
SHKBP1-218ENST00000598907 MINK1Q8N4C8 1332 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-218ENST00000598907 PTGER2P43116 358 aa20.57■□□□□ 0.88
SHKBP1-218ENST00000598907 TCP11L2Q8N4U5 519 aa20.57■□□□□ 0.88
SHKBP1-218ENST00000598907 BCL11BQ9C0K0 894 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-218ENST00000598907 C14orf93Q9H972 538 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-218ENST00000598907 PARP4Q9UKK3 1724 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-218ENST00000598907 DLC1Q96QB1 1528 aa20.56■□□□□ 0.88
SHKBP1-218ENST00000598907 OVOS2A0A0G2JMS6 1433 aa20.55■□□□□ 0.88
SHKBP1-218ENST00000598907 OVOS2A0A0J9YW53 1432 aa20.55■□□□□ 0.88
SHKBP1-218ENST00000598907 OVOS2Q6IE36 1432 aa20.55■□□□□ 0.88
SHKBP1-218ENST00000598907 SYT17Q9BSW7 474 aa20.55■□□□□ 0.88
SHKBP1-218ENST00000598907 EIF3AQ14152 1382 aaKnown RBP20.55■□□□□ 0.88
SHKBP1-218ENST00000598907 PEAK1Q9H792 1746 aa20.55■□□□□ 0.88
SHKBP1-218ENST00000598907 GIGYF1O75420 1035 aaPredicted RBP20.54■□□□□ 0.88
SHKBP1-218ENST00000598907 SBF2Q86WG5 1849 aa20.53■□□□□ 0.88
SHKBP1-218ENST00000598907 LMO7Q8WWI1 1683 aa20.52■□□□□ 0.88
SHKBP1-218ENST00000598907 LRRC37A3O60309 1634 aa20.52■□□□□ 0.88
SHKBP1-218ENST00000598907 ATP7BP35670 1465 aa20.51■□□□□ 0.87
SHKBP1-218ENST00000598907 ITSN1Q15811 1721 aa20.51■□□□□ 0.87
SHKBP1-218ENST00000598907 PTF1AQ7RTS3 328 aa20.51■□□□□ 0.87
SHKBP1-218ENST00000598907 TRAK1Q9UPV9 953 aa20.49■□□□□ 0.87
SHKBP1-218ENST00000598907 PLSCR1O15162 318 aa20.48■□□□□ 0.87
SHKBP1-218ENST00000598907 WASLO00401 505 aaPredicted RBP20.47■□□□□ 0.87
SHKBP1-218ENST00000598907 STK32BQ9NY57 414 aa20.47■□□□□ 0.87
SHKBP1-218ENST00000598907 COL5A2P05997 1499 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-218ENST00000598907 THRAP3Q9Y2W1 955 aaKnown RBP20.46■□□□□ 0.87
SHKBP1-218ENST00000598907 ADGRB1O14514 1584 aa20.46■□□□□ 0.87
SHKBP1-218ENST00000598907 CEP350Q5VT06 3117 aa20.45■□□□□ 0.86
SHKBP1-218ENST00000598907 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
SHKBP1-218ENST00000598907 C11orf95C9JLR9 678 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-218ENST00000598907 PROM2Q8N271 834 aa20.44■□□□□ 0.86
SHKBP1-218ENST00000598907 MTFR1LQ9H019 292 aa20.44■□□□□ 0.86
SHKBP1-218ENST00000598907 GPR162Q16538 588 aa20.43■□□□□ 0.86
SHKBP1-218ENST00000598907 CRB1P82279 1406 aa20.43■□□□□ 0.86
SHKBP1-218ENST00000598907 DDB1Q16531 1140 aa20.42■□□□□ 0.86
SHKBP1-218ENST00000598907 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-218ENST00000598907 SLC15A2Q16348 729 aa20.41■□□□□ 0.86
SHKBP1-218ENST00000598907 KLHL34Q8N239 644 aa20.41■□□□□ 0.86
SHKBP1-218ENST00000598907 ARXQ96QS3 562 aa20.41■□□□□ 0.86
SHKBP1-218ENST00000598907 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
SHKBP1-218ENST00000598907 CPDO75976 1380 aa20.41■□□□□ 0.86
SHKBP1-218ENST00000598907 SHANK3Q9BYB0 1731 aa20.41■□□□□ 0.86
SHKBP1-218ENST00000598907 AKAP12Q02952 1782 aa20.41■□□□□ 0.86
SHKBP1-218ENST00000598907 TXNRD1Q16881 649 aa20.4■□□□□ 0.86
SHKBP1-218ENST00000598907 SGIP1Q9BQI5 828 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms