RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 AKAP12Q02952 1782 aa17.45■□□□□ 0.38
PDE4C-213ENST00000598111 ATAD2Q6PL18 1390 aa17.44■□□□□ 0.38
PDE4C-213ENST00000598111 PLEKHG3A1L390 1219 aa17.44■□□□□ 0.38
PDE4C-213ENST00000598111 TIMELESSQ9UNS1 1208 aa17.44■□□□□ 0.38
PDE4C-213ENST00000598111 NWD2Q9ULI1 1742 aa17.44■□□□□ 0.38
PDE4C-213ENST00000598111 CABLES1Q8TDN4 633 aa17.42■□□□□ 0.38
PDE4C-213ENST00000598111 USP21Q9UK80 565 aa17.42■□□□□ 0.38
PDE4C-213ENST00000598111 CDK12Q9NYV4 1490 aaPredicted RBP17.41■□□□□ 0.38
PDE4C-213ENST00000598111 COL14A1Q05707 1796 aaKnown RBP17.4■□□□□ 0.38
PDE4C-213ENST00000598111 USP6P35125 1406 aa17.4■□□□□ 0.38
PDE4C-213ENST00000598111 RXRBP28702 533 aa17.4■□□□□ 0.38
PDE4C-213ENST00000598111 MON2Q7Z3U7 1717 aa17.4■□□□□ 0.38
PDE4C-213ENST00000598111 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
PDE4C-213ENST00000598111 USP47Q96K76 1375 aa17.4■□□□□ 0.38
PDE4C-213ENST00000598111 SLIT2O94813 1529 aa17.39■□□□□ 0.37
PDE4C-213ENST00000598111 FNBP4Q8N3X1 1017 aaPredicted RBP17.39■□□□□ 0.37
PDE4C-213ENST00000598111 CABP1Q9NZU7 370 aa17.39■□□□□ 0.37
PDE4C-213ENST00000598111 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.37
PDE4C-213ENST00000598111 ATRNO75882 1429 aa17.38■□□□□ 0.37
PDE4C-213ENST00000598111 TRPC5Q9UL62 973 aaPredicted RBP17.38■□□□□ 0.37
PDE4C-213ENST00000598111 BCL9LQ86UU0 1499 aa17.37■□□□□ 0.37
PDE4C-213ENST00000598111 PIK3C2AO00443 1686 aa17.37■□□□□ 0.37
PDE4C-213ENST00000598111 QTRT2Q9H974 415 aaKnown RBP17.37■□□□□ 0.37
PDE4C-213ENST00000598111 NRAPQ86VF7 1730 aa17.37■□□□□ 0.37
PDE4C-213ENST00000598111 RBM6P78332 1123 aaKnown RBP17.36■□□□□ 0.37
PDE4C-213ENST00000598111 RGS12O14924 1447 aa17.36■□□□□ 0.37
PDE4C-213ENST00000598111 ST20-MTHFSA0A0A6YYL1 179 aa17.35■□□□□ 0.37
PDE4C-213ENST00000598111 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
PDE4C-213ENST00000598111 ABTB2Q8N961 1025 aa17.35■□□□□ 0.37
PDE4C-213ENST00000598111 SLC24A1O60721 1099 aa17.34■□□□□ 0.37
PDE4C-213ENST00000598111 UNC5CLQ8IV45 518 aa17.33■□□□□ 0.36
PDE4C-213ENST00000598111 CPSF1Q10570 1443 aaKnown RBP17.32■□□□□ 0.36
PDE4C-213ENST00000598111 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
PDE4C-213ENST00000598111 TESK2Q96S53 571 aa17.32■□□□□ 0.36
PDE4C-213ENST00000598111 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
PDE4C-213ENST00000598111 GLI3P10071 1580 aa17.32■□□□□ 0.36
PDE4C-213ENST00000598111 SSH2Q76I76 1423 aa17.31■□□□□ 0.36
PDE4C-213ENST00000598111 USP19O94966 1318 aa17.31■□□□□ 0.36
PDE4C-213ENST00000598111 NLRP13Q86W25 1043 aa17.31■□□□□ 0.36
PDE4C-213ENST00000598111 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
PDE4C-213ENST00000598111 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
PDE4C-213ENST00000598111 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
PDE4C-213ENST00000598111 NINLQ9Y2I6 1382 aa17.3■□□□□ 0.36
PDE4C-213ENST00000598111 SLIT3O75094 1523 aa17.3■□□□□ 0.36
PDE4C-213ENST00000598111 FAM83GA6ND36 823 aa17.29■□□□□ 0.36
PDE4C-213ENST00000598111 PUS7Q96PZ0 661 aaKnown RBP17.29■□□□□ 0.36
PDE4C-213ENST00000598111 CCDC9Q9Y3X0 531 aaKnown RBP17.29■□□□□ 0.36
PDE4C-213ENST00000598111 TTC21AQ8NDW8 1320 aa17.28■□□□□ 0.36
PDE4C-213ENST00000598111 TMF1P82094 1093 aa17.28■□□□□ 0.36
PDE4C-213ENST00000598111 HDGFL2Q7Z4V5 671 aaPredicted RBP17.28■□□□□ 0.36
PDE4C-213ENST00000598111 CD163L1Q9NR16 1453 aa17.28■□□□□ 0.36
PDE4C-213ENST00000598111 USP54Q70EL1 1684 aa17.28■□□□□ 0.36
PDE4C-213ENST00000598111 TTC21BQ7Z4L5 1316 aa17.27■□□□□ 0.36
PDE4C-213ENST00000598111 LMO7Q8WWI1 1683 aa17.27■□□□□ 0.36
PDE4C-213ENST00000598111 NLRP6P59044 892 aa17.27■□□□□ 0.36
PDE4C-213ENST00000598111 ZC3H6P61129 1189 aaKnown RBP17.27■□□□□ 0.36
PDE4C-213ENST00000598111 GJD4Q96KN9 370 aaPredicted RBP17.27■□□□□ 0.36
PDE4C-213ENST00000598111 BTG4Q9NY30 223 aa17.27■□□□□ 0.36
PDE4C-213ENST00000598111 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
PDE4C-213ENST00000598111 VPS72Q15906 364 aa17.26■□□□□ 0.35
PDE4C-213ENST00000598111 EDC4Q6P2E9 1401 aaKnown RBP17.26■□□□□ 0.35
PDE4C-213ENST00000598111 A0A1W2PP64 1363 aa17.26■□□□□ 0.35
PDE4C-213ENST00000598111 CPDO75976 1380 aa17.26■□□□□ 0.35
PDE4C-213ENST00000598111 MYOM1P52179 1685 aa17.26■□□□□ 0.35
PDE4C-213ENST00000598111 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
PDE4C-213ENST00000598111 SLC12A5Q9H2X9 1139 aa17.25■□□□□ 0.35
PDE4C-213ENST00000598111 BRWD3Q6RI45 1802 aa17.24■□□□□ 0.35
PDE4C-213ENST00000598111 GCP02774 474 aa17.24■□□□□ 0.35
PDE4C-213ENST00000598111 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
PDE4C-213ENST00000598111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.23■□□□□ 0.35
PDE4C-213ENST00000598111 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
PDE4C-213ENST00000598111 LTN1O94822 1766 aa17.21■□□□□ 0.35
PDE4C-213ENST00000598111 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.35
PDE4C-213ENST00000598111 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
PDE4C-213ENST00000598111 KIF20BQ96Q89 1820 aa17.21■□□□□ 0.35
PDE4C-213ENST00000598111 NFAT5O94916 1531 aa17.21■□□□□ 0.34
PDE4C-213ENST00000598111 A0A0G2JS52 829 aa17.2■□□□□ 0.34
PDE4C-213ENST00000598111 EIF4G2P78344 907 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDE4C-213ENST00000598111 MYT1Q01538 1121 aa17.2■□□□□ 0.34
PDE4C-213ENST00000598111 KCNH5Q8NCM2 988 aa17.2■□□□□ 0.34
PDE4C-213ENST00000598111 STRN4Q9NRL3 753 aa17.2■□□□□ 0.34
PDE4C-213ENST00000598111 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
PDE4C-213ENST00000598111 SOX12O15370 315 aa17.19■□□□□ 0.34
PDE4C-213ENST00000598111 COL18A1P39060 1754 aa17.19■□□□□ 0.34
PDE4C-213ENST00000598111 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
PDE4C-213ENST00000598111 USP31Q70CQ4 1352 aa17.18■□□□□ 0.34
PDE4C-213ENST00000598111 ABCC6O95255 1503 aa17.18■□□□□ 0.34
PDE4C-213ENST00000598111 THSD7AQ9UPZ6 1657 aa17.18■□□□□ 0.34
PDE4C-213ENST00000598111 NME9Q86XW9 330 aa17.18■□□□□ 0.34
PDE4C-213ENST00000598111 SPATA31A5Q5VU36 1347 aa17.18■□□□□ 0.34
PDE4C-213ENST00000598111 SPATA31A7Q8IWB4 1347 aa17.18■□□□□ 0.34
PDE4C-213ENST00000598111 OVOS2A0A0J9YW53 1432 aa17.17■□□□□ 0.34
PDE4C-213ENST00000598111 EVA1CP58658 441 aa17.17■□□□□ 0.34
PDE4C-213ENST00000598111 OVOS2Q6IE36 1432 aa17.17■□□□□ 0.34
PDE4C-213ENST00000598111 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
PDE4C-213ENST00000598111 WNK3Q9BYP7 1800 aa17.15■□□□□ 0.34
PDE4C-213ENST00000598111 HSPA5P11021 654 aaKnown RBP17.15■□□□□ 0.34
PDE4C-213ENST00000598111 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
PDE4C-213ENST00000598111 SEPT12Q8IYM1 358 aa17.15■□□□□ 0.34
PDE4C-213ENST00000598111 UPF1Q92900 1129 aaKnown RBP eCLIP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms