RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 TRPC5Q9UL62 973 aaPredicted RBP16.75■□□□□ 0.27
SYMPK-207ENST00000596824 NBPF8Q3BBV2 869 aa16.74■□□□□ 0.27
SYMPK-207ENST00000596824 LMOD2Q6P5Q4 547 aa16.74■□□□□ 0.27
SYMPK-207ENST00000596824 PPIP5K1Q6PFW1 1433 aa16.73■□□□□ 0.27
SYMPK-207ENST00000596824 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
SYMPK-207ENST00000596824 NRKQ7Z2Y5 1582 aa16.72■□□□□ 0.27
SYMPK-207ENST00000596824 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
SYMPK-207ENST00000596824 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
SYMPK-207ENST00000596824 MON2Q7Z3U7 1717 aa16.72■□□□□ 0.27
SYMPK-207ENST00000596824 PLEKHG3A1L390 1219 aa16.71■□□□□ 0.27
SYMPK-207ENST00000596824 PLEKHG5O94827 1062 aa16.71■□□□□ 0.27
SYMPK-207ENST00000596824 ACEP12821 1306 aa16.7■□□□□ 0.26
SYMPK-207ENST00000596824 PIK3C2AO00443 1686 aa16.7■□□□□ 0.26
SYMPK-207ENST00000596824 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
SYMPK-207ENST00000596824 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
SYMPK-207ENST00000596824 UNC5CLQ8IV45 518 aa16.69■□□□□ 0.26
SYMPK-207ENST00000596824 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
SYMPK-207ENST00000596824 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.26
SYMPK-207ENST00000596824 EVC2Q86UK5 1308 aa16.67■□□□□ 0.26
SYMPK-207ENST00000596824 LMO7Q8WWI1 1683 aa16.66■□□□□ 0.26
SYMPK-207ENST00000596824 GJD4Q96KN9 370 aaPredicted RBP16.66■□□□□ 0.26
SYMPK-207ENST00000596824 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
SYMPK-207ENST00000596824 FAM83GA6ND36 823 aa16.65■□□□□ 0.26
SYMPK-207ENST00000596824 RGPD5Q99666 1765 aa16.64■□□□□ 0.25
SYMPK-207ENST00000596824 USP6P35125 1406 aa16.64■□□□□ 0.25
SYMPK-207ENST00000596824 USP54Q70EL1 1684 aa16.64■□□□□ 0.25
SYMPK-207ENST00000596824 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
SYMPK-207ENST00000596824 CARD11Q9BXL7 1154 aa16.63■□□□□ 0.25
SYMPK-207ENST00000596824 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
SYMPK-207ENST00000596824 THSD7AQ9UPZ6 1657 aa16.62■□□□□ 0.25
SYMPK-207ENST00000596824 SLIT3O75094 1523 aa16.62■□□□□ 0.25
SYMPK-207ENST00000596824 VPS72Q15906 364 aa16.62■□□□□ 0.25
SYMPK-207ENST00000596824 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
SYMPK-207ENST00000596824 SSH2Q76I76 1423 aa16.62■□□□□ 0.25
SYMPK-207ENST00000596824 NUTM2GQ5VZR2 741 aa16.61■□□□□ 0.25
SYMPK-207ENST00000596824 USP19O94966 1318 aa16.61■□□□□ 0.25
SYMPK-207ENST00000596824 KIAA0232Q92628 1395 aa16.61■□□□□ 0.25
SYMPK-207ENST00000596824 COL18A1P39060 1754 aa16.61■□□□□ 0.25
SYMPK-207ENST00000596824 WNK3Q9BYP7 1800 aa16.61■□□□□ 0.25
SYMPK-207ENST00000596824 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
SYMPK-207ENST00000596824 ABTB2Q8N961 1025 aa16.59■□□□□ 0.25
SYMPK-207ENST00000596824 LTN1O94822 1766 aa16.59■□□□□ 0.25
SYMPK-207ENST00000596824 EP400Q96L91 3159 aa16.59■□□□□ 0.25
SYMPK-207ENST00000596824 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.24
SYMPK-207ENST00000596824 CPSF1Q10570 1443 aaKnown RBP16.58■□□□□ 0.24
SYMPK-207ENST00000596824 CAMTA1Q9Y6Y1 1673 aa16.58■□□□□ 0.24
SYMPK-207ENST00000596824 CCDC9Q9Y3X0 531 aaKnown RBP16.57■□□□□ 0.24
SYMPK-207ENST00000596824 CD163L1Q9NR16 1453 aa16.56■□□□□ 0.24
SYMPK-207ENST00000596824 CPDO75976 1380 aa16.56■□□□□ 0.24
SYMPK-207ENST00000596824 ONECUT3O60422 494 aaPredicted RBP16.55■□□□□ 0.24
SYMPK-207ENST00000596824 ZC3H6P61129 1189 aaKnown RBP16.55■□□□□ 0.24
SYMPK-207ENST00000596824 CHRNA2Q15822 529 aa16.55■□□□□ 0.24
SYMPK-207ENST00000596824 NLRP13Q86W25 1043 aa16.55■□□□□ 0.24
SYMPK-207ENST00000596824 RGPD1P0DJD0 1748 aa16.55■□□□□ 0.24
SYMPK-207ENST00000596824 SEPT12Q8IYM1 358 aa16.54■□□□□ 0.24
SYMPK-207ENST00000596824 PARP4Q9UKK3 1724 aaKnown RBP16.53■□□□□ 0.24
SYMPK-207ENST00000596824 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
SYMPK-207ENST00000596824 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
SYMPK-207ENST00000596824 ZNF692Q9BU19 519 aaPredicted RBP16.53■□□□□ 0.24
SYMPK-207ENST00000596824 TNS1Q9HBL0 1735 aaKnown RBP16.53■□□□□ 0.24
SYMPK-207ENST00000596824 KTN1Q86UP2 1357 aaKnown RBP16.52■□□□□ 0.24
SYMPK-207ENST00000596824 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
SYMPK-207ENST00000596824 NFAT5O94916 1531 aa16.52■□□□□ 0.24
SYMPK-207ENST00000596824 TTC21BQ7Z4L5 1316 aa16.51■□□□□ 0.23
SYMPK-207ENST00000596824 MYOM1P52179 1685 aa16.51■□□□□ 0.23
SYMPK-207ENST00000596824 COL5A2P05997 1499 aaPredicted RBP16.51■□□□□ 0.23
SYMPK-207ENST00000596824 GCP02774 474 aa16.51■□□□□ 0.23
SYMPK-207ENST00000596824 NLRP6P59044 892 aa16.51■□□□□ 0.23
SYMPK-207ENST00000596824 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
SYMPK-207ENST00000596824 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
SYMPK-207ENST00000596824 FAM98CQ17RN3 349 aaKnown RBP16.5■□□□□ 0.23
SYMPK-207ENST00000596824 TESK2Q96S53 571 aa16.5■□□□□ 0.23
SYMPK-207ENST00000596824 KIF20BQ96Q89 1820 aa16.49■□□□□ 0.23
SYMPK-207ENST00000596824 SPATA31A1Q5TZJ5 1347 aa16.49■□□□□ 0.23
SYMPK-207ENST00000596824 ST20-MTHFSA0A0A6YYL1 179 aa16.49■□□□□ 0.23
SYMPK-207ENST00000596824 ABCC6O95255 1503 aa16.49■□□□□ 0.23
SYMPK-207ENST00000596824 USP47Q96K76 1375 aa16.49■□□□□ 0.23
SYMPK-207ENST00000596824 PUS7Q96PZ0 661 aaKnown RBP16.48■□□□□ 0.23
SYMPK-207ENST00000596824 STRN4Q9NRL3 753 aa16.48■□□□□ 0.23
SYMPK-207ENST00000596824 SBF2Q86WG5 1849 aa16.47■□□□□ 0.23
SYMPK-207ENST00000596824 BLMP54132 1417 aaPredicted RBP16.47■□□□□ 0.23
SYMPK-207ENST00000596824 KRT27Q7Z3Y8 459 aa16.47■□□□□ 0.23
SYMPK-207ENST00000596824 TIMELESSQ9UNS1 1208 aa16.47■□□□□ 0.23
SYMPK-207ENST00000596824 LRRC37A3O60309 1634 aa16.47■□□□□ 0.23
SYMPK-207ENST00000596824 AATKQ6ZMQ8 1374 aa16.47■□□□□ 0.23
SYMPK-207ENST00000596824 EDC4Q6P2E9 1401 aaKnown RBP16.46■□□□□ 0.23
SYMPK-207ENST00000596824 A0A0G2JS52 829 aa16.46■□□□□ 0.23
SYMPK-207ENST00000596824 MYT1Q01538 1121 aa16.46■□□□□ 0.23
SYMPK-207ENST00000596824 CCDC125Q86Z20 511 aa16.46■□□□□ 0.23
SYMPK-207ENST00000596824 A0A1W2PP64 1363 aa16.46■□□□□ 0.23
SYMPK-207ENST00000596824 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.23
SYMPK-207ENST00000596824 TMC1Q8TDI8 760 aa16.45■□□□□ 0.22
SYMPK-207ENST00000596824 SLC12A5Q9H2X9 1139 aa16.45■□□□□ 0.22
SYMPK-207ENST00000596824 USP31Q70CQ4 1352 aa16.45■□□□□ 0.22
SYMPK-207ENST00000596824 EVA1CP58658 441 aa16.44■□□□□ 0.22
SYMPK-207ENST00000596824 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
SYMPK-207ENST00000596824 CRB1P82279 1406 aa16.44■□□□□ 0.22
SYMPK-207ENST00000596824 FAM208AQ9UK61 1670 aaKnown RBP16.43■□□□□ 0.22
SYMPK-207ENST00000596824 PEAK1Q9H792 1746 aa16.43■□□□□ 0.22
SYMPK-207ENST00000596824 HDGFL2Q7Z4V5 671 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms