RNA–Protein interactions for RNA: ENST00000596203.1

LINC00664-201, long intergenic non-protein coding RNA 664, humanhuman

TSL 1 (best) BASIC

Gene LINC00664, Length 1,742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00664-201ENST00000596203 TTC21BQ7Z4L5 1316 aa17.09■□□□□ 0.33
LINC00664-201ENST00000596203 KIF20BQ96Q89 1820 aa17.08■□□□□ 0.33
LINC00664-201ENST00000596203 FOXO3O43524 673 aa17.08■□□□□ 0.32
LINC00664-201ENST00000596203 MRS2Q9HD23 443 aa17.08■□□□□ 0.32
LINC00664-201ENST00000596203 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
LINC00664-201ENST00000596203 CCDC184Q52MB2 194 aa17.07■□□□□ 0.32
LINC00664-201ENST00000596203 XPCQ01831 940 aaPredicted RBP17.07■□□□□ 0.32
LINC00664-201ENST00000596203 SLAIN2Q9P270 581 aa17.07■□□□□ 0.32
LINC00664-201ENST00000596203 PPP2R1AP30153 589 aa17.06■□□□□ 0.32
LINC00664-201ENST00000596203 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
LINC00664-201ENST00000596203 ZRANB1Q9UGI0 708 aa17.06■□□□□ 0.32
LINC00664-201ENST00000596203 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
LINC00664-201ENST00000596203 KIF1AQ12756 1690 aa17.05■□□□□ 0.32
LINC00664-201ENST00000596203 TTC21AQ8NDW8 1320 aa17.05■□□□□ 0.32
LINC00664-201ENST00000596203 COG3Q96JB2 828 aa17.04■□□□□ 0.32
LINC00664-201ENST00000596203 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
LINC00664-201ENST00000596203 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
LINC00664-201ENST00000596203 KRT28Q7Z3Y7 464 aa17.03■□□□□ 0.32
LINC00664-201ENST00000596203 DDX17Q92841 729 aaKnown RBP17.03■□□□□ 0.32
LINC00664-201ENST00000596203 ANKRD26Q9UPS8 1709 aa17.03■□□□□ 0.32
LINC00664-201ENST00000596203 BRD4O60885 1362 aaPredicted RBP17.02■□□□□ 0.32
LINC00664-201ENST00000596203 NUTM2GQ5VZR2 741 aa17.02■□□□□ 0.32
LINC00664-201ENST00000596203 ABTB2Q8N961 1025 aa17.01■□□□□ 0.31
LINC00664-201ENST00000596203 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
LINC00664-201ENST00000596203 NLRP6P59044 892 aa17■□□□□ 0.31
LINC00664-201ENST00000596203 YTHDC1Q96MU7 727 aaKnown RBP17■□□□□ 0.31
LINC00664-201ENST00000596203 NPHP3Q7Z494 1330 aa17■□□□□ 0.31
LINC00664-201ENST00000596203 SOX12O15370 315 aa16.99■□□□□ 0.31
LINC00664-201ENST00000596203 FAM9BQ8IZU0 186 aa16.99■□□□□ 0.31
LINC00664-201ENST00000596203 PIK3C2AO00443 1686 aa16.98■□□□□ 0.31
LINC00664-201ENST00000596203 FBLN1P23142 703 aa16.98■□□□□ 0.31
LINC00664-201ENST00000596203 PLEKHG5O94827 1062 aa16.97■□□□□ 0.31
LINC00664-201ENST00000596203 MTHFSP49914 203 aa16.97■□□□□ 0.31
LINC00664-201ENST00000596203 OVOS2A0A0J9YW53 1432 aa16.97■□□□□ 0.31
LINC00664-201ENST00000596203 OVOS2Q6IE36 1432 aa16.97■□□□□ 0.31
LINC00664-201ENST00000596203 PPM1GO15355 546 aaPredicted RBP16.96■□□□□ 0.3
LINC00664-201ENST00000596203 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
LINC00664-201ENST00000596203 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
LINC00664-201ENST00000596203 TRPM3Q9HCF6 1732 aaPredicted RBP16.94■□□□□ 0.3
LINC00664-201ENST00000596203 CFAP53Q96M91 514 aa16.94■□□□□ 0.3
LINC00664-201ENST00000596203 TOM1O60784 492 aa16.93■□□□□ 0.3
LINC00664-201ENST00000596203 RRS1Q15050 365 aaKnown RBP16.93■□□□□ 0.3
LINC00664-201ENST00000596203 PIP4K2BP78356 416 aa16.93■□□□□ 0.3
LINC00664-201ENST00000596203 PNISRQ8TF01 805 aaKnown RBP16.93■□□□□ 0.3
LINC00664-201ENST00000596203 POLKQ9UBT6 870 aa16.93■□□□□ 0.3
LINC00664-201ENST00000596203 EMILIN1Q9Y6C2 1016 aa16.93■□□□□ 0.3
LINC00664-201ENST00000596203 PXDNQ92626 1479 aa16.92■□□□□ 0.3
LINC00664-201ENST00000596203 SBNO1A3KN83 1393 aa16.92■□□□□ 0.3
LINC00664-201ENST00000596203 UBAP1LF5GYI3 381 aa16.92■□□□□ 0.3
LINC00664-201ENST00000596203 AATKQ6ZMQ8 1374 aa16.92■□□□□ 0.3
LINC00664-201ENST00000596203 MAP2P11137 1827 aaKnown RBP16.91■□□□□ 0.3
LINC00664-201ENST00000596203 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
LINC00664-201ENST00000596203 WDR43Q15061 677 aaKnown RBP eCLIP16.9■□□□□ 0.3
LINC00664-201ENST00000596203 CERKQ8TCT0 537 aa16.9■□□□□ 0.3
LINC00664-201ENST00000596203 TNS3Q68CZ2 1445 aa16.9■□□□□ 0.3
LINC00664-201ENST00000596203 MARF1Q9Y4F3 1742 aaKnown RBP16.89■□□□□ 0.29
LINC00664-201ENST00000596203 SOS2Q07890 1332 aaPredicted RBP16.89■□□□□ 0.29
LINC00664-201ENST00000596203 SPATA31A3Q5VYP0 1347 aa16.89■□□□□ 0.29
LINC00664-201ENST00000596203 ALS2Q96Q42 1657 aa16.88■□□□□ 0.29
LINC00664-201ENST00000596203 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
LINC00664-201ENST00000596203 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
LINC00664-201ENST00000596203 ZBTB7CA1YPR0 619 aa16.87■□□□□ 0.29
LINC00664-201ENST00000596203 ARHGEF10O15013 1369 aa16.87■□□□□ 0.29
LINC00664-201ENST00000596203 KCNH5Q8NCM2 988 aa16.87■□□□□ 0.29
LINC00664-201ENST00000596203 MAP3K19Q56UN5 1328 aa16.86■□□□□ 0.29
LINC00664-201ENST00000596203 IQSEC2Q5JU85 1478 aa16.86■□□□□ 0.29
LINC00664-201ENST00000596203 AMPHP49418 695 aa16.86■□□□□ 0.29
LINC00664-201ENST00000596203 GCP02774 474 aa16.85■□□□□ 0.29
LINC00664-201ENST00000596203 SMG6Q86US8 1419 aaKnown RBP16.85■□□□□ 0.29
LINC00664-201ENST00000596203 USP19O94966 1318 aa16.85■□□□□ 0.29
LINC00664-201ENST00000596203 DIAPH1O60610 1272 aaKnown RBP16.84■□□□□ 0.29
LINC00664-201ENST00000596203 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
LINC00664-201ENST00000596203 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
LINC00664-201ENST00000596203 U2SURPO15042 1029 aaKnown RBP16.84■□□□□ 0.29
LINC00664-201ENST00000596203 NUDCQ9Y266 331 aa16.84■□□□□ 0.29
LINC00664-201ENST00000596203 CDK12Q9NYV4 1490 aaPredicted RBP16.84■□□□□ 0.29
LINC00664-201ENST00000596203 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.29
LINC00664-201ENST00000596203 HNRNPUQ00839 825 aaKnown RBP eCLIP16.83■□□□□ 0.28
LINC00664-201ENST00000596203 SLIT3O75094 1523 aa16.83■□□□□ 0.28
LINC00664-201ENST00000596203 AHDC1Q5TGY3 1603 aaPredicted RBP16.82■□□□□ 0.28
LINC00664-201ENST00000596203 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
LINC00664-201ENST00000596203 NFAT5O94916 1531 aa16.82■□□□□ 0.28
LINC00664-201ENST00000596203 MED1Q15648 1581 aaPredicted RBP16.82■□□□□ 0.28
LINC00664-201ENST00000596203 PEAK1Q9H792 1746 aa16.82■□□□□ 0.28
LINC00664-201ENST00000596203 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
LINC00664-201ENST00000596203 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
LINC00664-201ENST00000596203 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
LINC00664-201ENST00000596203 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.28
LINC00664-201ENST00000596203 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
LINC00664-201ENST00000596203 INSRP06213 1382 aa16.81■□□□□ 0.28
LINC00664-201ENST00000596203 SHPRHQ149N8 1683 aa16.81■□□□□ 0.28
LINC00664-201ENST00000596203 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
LINC00664-201ENST00000596203 HSP90AB2PQ58FF8 381 aa16.81■□□□□ 0.28
LINC00664-201ENST00000596203 FLT4P35916 1363 aa16.81■□□□□ 0.28
LINC00664-201ENST00000596203 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
LINC00664-201ENST00000596203 LTN1O94822 1766 aa16.79■□□□□ 0.28
LINC00664-201ENST00000596203 HOXC9P31274 260 aa16.79■□□□□ 0.28
LINC00664-201ENST00000596203 CCDC146Q8IYE0 955 aa16.79■□□□□ 0.28
LINC00664-201ENST00000596203 PHRF1Q9P1Y6 1649 aaKnown RBP16.78■□□□□ 0.28
LINC00664-201ENST00000596203 IL13P35225 146 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms