RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 PMFBP1Q8TBY8 1022 aa12.75□□□□□ -0.37
SMG9-202ENST00000594081 TULP4Q9NRJ4 1543 aa12.75□□□□□ -0.37
SMG9-202ENST00000594081 DHX57Q6P158 1386 aaKnown RBP12.74□□□□□ -0.37
SMG9-202ENST00000594081 PARD3Q8TEW0 1356 aa12.74□□□□□ -0.37
SMG9-202ENST00000594081 PRAM1Q96QH2 718 aa12.74□□□□□ -0.37
SMG9-202ENST00000594081 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
SMG9-202ENST00000594081 GPRASP1Q5JY77 1395 aa12.73□□□□□ -0.37
SMG9-202ENST00000594081 YY1P25490 414 aa12.73□□□□□ -0.37
SMG9-202ENST00000594081 ADGRB1O14514 1584 aa12.73□□□□□ -0.37
SMG9-202ENST00000594081 ACIN1Q9UKV3 1341 aaKnown RBP12.72□□□□□ -0.37
SMG9-202ENST00000594081 CAMKK2Q96RR4 588 aa12.72□□□□□ -0.37
SMG9-202ENST00000594081 C14orf93Q9H972 538 aaKnown RBP12.72□□□□□ -0.37
SMG9-202ENST00000594081 EIF3AQ14152 1382 aaKnown RBP12.71□□□□□ -0.37
SMG9-202ENST00000594081 SPATA31A1Q5TZJ5 1347 aa12.71□□□□□ -0.37
SMG9-202ENST00000594081 TRIM37O94972 964 aa12.71□□□□□ -0.37
SMG9-202ENST00000594081 CFAP70Q5T0N1 1121 aa12.71□□□□□ -0.37
SMG9-202ENST00000594081 PRDM11Q9NQV5 511 aa12.71□□□□□ -0.37
SMG9-202ENST00000594081 PRR36Q9H6K5 1346 aa12.7□□□□□ -0.38
SMG9-202ENST00000594081 KIAA0232Q92628 1395 aa12.69□□□□□ -0.38
SMG9-202ENST00000594081 NRKQ7Z2Y5 1582 aa12.69□□□□□ -0.38
SMG9-202ENST00000594081 APBA3O96018 575 aa12.69□□□□□ -0.38
SMG9-202ENST00000594081 FAM196AQ6ZSG2 479 aa12.69□□□□□ -0.38
SMG9-202ENST00000594081 POGKQ9P215 609 aa12.69□□□□□ -0.38
SMG9-202ENST00000594081 ATP7BP35670 1465 aa12.69□□□□□ -0.38
SMG9-202ENST00000594081 CAMTA1Q9Y6Y1 1673 aa12.69□□□□□ -0.38
SMG9-202ENST00000594081 RGPD3A6NKT7 1758 aaPredicted RBP12.69□□□□□ -0.38
SMG9-202ENST00000594081 RGPD4Q7Z3J3 1758 aa12.69□□□□□ -0.38
SMG9-202ENST00000594081 HIRIP3Q9BW71 556 aaPredicted RBP12.68□□□□□ -0.38
SMG9-202ENST00000594081 TOPAZ1Q8N9V7 1692 aa12.67□□□□□ -0.38
SMG9-202ENST00000594081 LMO7Q8WWI1 1683 aa12.67□□□□□ -0.38
SMG9-202ENST00000594081 MPHOSPH9Q99550 1183 aa12.67□□□□□ -0.38
SMG9-202ENST00000594081 SSH2Q76I76 1423 aa12.67□□□□□ -0.38
SMG9-202ENST00000594081 ARHGEF28Q8N1W1 1705 aaKnown RBP12.67□□□□□ -0.38
SMG9-202ENST00000594081 PARP4Q9UKK3 1724 aaKnown RBP12.67□□□□□ -0.38
SMG9-202ENST00000594081 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
SMG9-202ENST00000594081 MINK1Q8N4C8 1332 aaPredicted RBP12.66□□□□□ -0.38
SMG9-202ENST00000594081 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
SMG9-202ENST00000594081 CHRNA2Q15822 529 aa12.66□□□□□ -0.38
SMG9-202ENST00000594081 STRN4Q9NRL3 753 aa12.66□□□□□ -0.38
SMG9-202ENST00000594081 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.38
SMG9-202ENST00000594081 CASZ1Q86V15 1759 aa12.65□□□□□ -0.38
SMG9-202ENST00000594081 USP35Q9P2H5 1018 aa12.64□□□□□ -0.39
SMG9-202ENST00000594081 PPP1R1BQ9UD71 204 aaPredicted RBP12.64□□□□□ -0.39
SMG9-202ENST00000594081 PEAK1Q9H792 1746 aa12.64□□□□□ -0.39
SMG9-202ENST00000594081 LRRC37A3O60309 1634 aa12.63□□□□□ -0.39
SMG9-202ENST00000594081 WASLO00401 505 aaPredicted RBP12.63□□□□□ -0.39
SMG9-202ENST00000594081 PDE3BQ13370 1112 aa12.63□□□□□ -0.39
SMG9-202ENST00000594081 NBPF8Q3BBV2 869 aa12.63□□□□□ -0.39
SMG9-202ENST00000594081 NBPF14Q5TI25 921 aa12.63□□□□□ -0.39
SMG9-202ENST00000594081 BARGINQ6ZT62 677 aa12.63□□□□□ -0.39
SMG9-202ENST00000594081 SPON1Q9HCB6 807 aa12.63□□□□□ -0.39
SMG9-202ENST00000594081 TRAK1Q9UPV9 953 aa12.63□□□□□ -0.39
SMG9-202ENST00000594081 MYOM1P52179 1685 aa12.62□□□□□ -0.39
SMG9-202ENST00000594081 WNK3Q9BYP7 1800 aa12.62□□□□□ -0.39
SMG9-202ENST00000594081 SBF2Q86WG5 1849 aa12.61□□□□□ -0.39
SMG9-202ENST00000594081 KCNQ2O43526 872 aa12.61□□□□□ -0.39
SMG9-202ENST00000594081 ZC3H6P61129 1189 aaKnown RBP12.61□□□□□ -0.39
SMG9-202ENST00000594081 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
SMG9-202ENST00000594081 OVOS2A0A0G2JMS6 1433 aa12.6□□□□□ -0.39
SMG9-202ENST00000594081 OVOS2A0A0J9YW53 1432 aa12.6□□□□□ -0.39
SMG9-202ENST00000594081 OVOS2Q6IE36 1432 aa12.6□□□□□ -0.39
SMG9-202ENST00000594081 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
SMG9-202ENST00000594081 NUTM2GQ5VZR2 741 aa12.59□□□□□ -0.39
SMG9-202ENST00000594081 LARP1Q6PKG0 1096 aaKnown RBP12.59□□□□□ -0.39
SMG9-202ENST00000594081 TCP11L2Q8N4U5 519 aa12.59□□□□□ -0.39
SMG9-202ENST00000594081 POLR3AO14802 1390 aaPredicted RBP12.58□□□□□ -0.4
SMG9-202ENST00000594081 CPDO75976 1380 aa12.58□□□□□ -0.4
SMG9-202ENST00000594081 EVA1CP58658 441 aa12.58□□□□□ -0.4
SMG9-202ENST00000594081 AKAP12Q02952 1782 aa12.57□□□□□ -0.4
SMG9-202ENST00000594081 ADRA2BP18089 450 aa12.57□□□□□ -0.4
SMG9-202ENST00000594081 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
SMG9-202ENST00000594081 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
SMG9-202ENST00000594081 CRB1P82279 1406 aa12.56□□□□□ -0.4
SMG9-202ENST00000594081 MSH5O43196 834 aa12.56□□□□□ -0.4
SMG9-202ENST00000594081 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
SMG9-202ENST00000594081 THRAP3Q9Y2W1 955 aaKnown RBP12.56□□□□□ -0.4
SMG9-202ENST00000594081 USP19O94966 1318 aa12.56□□□□□ -0.4
SMG9-202ENST00000594081 C11orf95C9JLR9 678 aaPredicted RBP12.54□□□□□ -0.4
SMG9-202ENST00000594081 ACEP12821 1306 aa12.54□□□□□ -0.4
SMG9-202ENST00000594081 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
SMG9-202ENST00000594081 CHD4Q14839 1912 aa12.52□□□□□ -0.4
SMG9-202ENST00000594081 SLIT3O75094 1523 aa12.52□□□□□ -0.4
SMG9-202ENST00000594081 ABTB2Q8N961 1025 aa12.52□□□□□ -0.41
SMG9-202ENST00000594081 PDGFDQ9GZP0 370 aaPredicted RBP12.52□□□□□ -0.41
SMG9-202ENST00000594081 PLSCR1O15162 318 aa12.51□□□□□ -0.41
SMG9-202ENST00000594081 DCAF11Q8TEB1 546 aa12.51□□□□□ -0.41
SMG9-202ENST00000594081 KDM2AQ9Y2K7 1162 aa12.51□□□□□ -0.41
SMG9-202ENST00000594081 UTRNP46939 3433 aa12.51□□□□□ -0.41
SMG9-202ENST00000594081 COL18A1P39060 1754 aa12.51□□□□□ -0.41
SMG9-202ENST00000594081 ZBTB7AO95365 584 aa12.5□□□□□ -0.41
SMG9-202ENST00000594081 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
SMG9-202ENST00000594081 PIK3C2AO00443 1686 aa12.5□□□□□ -0.41
SMG9-202ENST00000594081 QRICH2Q9H0J4 1663 aa12.5□□□□□ -0.41
SMG9-202ENST00000594081 KIAA1210Q9ULL0 1709 aa12.5□□□□□ -0.41
SMG9-202ENST00000594081 PPIP5K1Q6PFW1 1433 aa12.49□□□□□ -0.41
SMG9-202ENST00000594081 SENP3-EIF4A1A0A087X0R7 540 aa12.49□□□□□ -0.41
SMG9-202ENST00000594081 GCP02774 474 aa12.49□□□□□ -0.41
SMG9-202ENST00000594081 PTGER2P43116 358 aa12.49□□□□□ -0.41
SMG9-202ENST00000594081 PTF1AQ7RTS3 328 aa12.49□□□□□ -0.41
SMG9-202ENST00000594081 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms