RNA–Protein interactions for RNA: ENST00000592483.5

CAPNS1-214, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-214ENST00000592483 TIMELESSQ9UNS1 1208 aa33.95■■■■□ 3.03
CAPNS1-214ENST00000592483 ADGRB2O60241 1585 aa33.94■■■■□ 3.02
CAPNS1-214ENST00000592483 THSD7AQ9UPZ6 1657 aa33.93■■■■□ 3.02
CAPNS1-214ENST00000592483 RGL3Q3MIN7 710 aa33.93■■■■□ 3.02
CAPNS1-214ENST00000592483 FAM196AQ6ZSG2 479 aa33.93■■■■□ 3.02
CAPNS1-214ENST00000592483 TRIM37O94972 964 aa33.92■■■■□ 3.02
CAPNS1-214ENST00000592483 PIK3C2GO75747 1445 aa33.9■■■■□ 3.02
CAPNS1-214ENST00000592483 TONSLQ96HA7 1378 aa33.9■■■■□ 3.02
CAPNS1-214ENST00000592483 APBA3O96018 575 aa33.9■■■■□ 3.02
CAPNS1-214ENST00000592483 DCAF8L1A6NGE4 600 aa33.89■■■■□ 3.02
CAPNS1-214ENST00000592483 PMFBP1Q8TBY8 1022 aa33.89■■■■□ 3.02
CAPNS1-214ENST00000592483 STAC3Q96MF2 364 aa33.88■■■■□ 3.01
CAPNS1-214ENST00000592483 NBPF8Q3BBV2 869 aa33.85■■■■□ 3.01
CAPNS1-214ENST00000592483 NBPF14Q5TI25 921 aa33.85■■■■□ 3.01
CAPNS1-214ENST00000592483 ANKARQ7Z5J8 1434 aa33.84■■■■□ 3.01
CAPNS1-214ENST00000592483 PPP1R1BQ9UD71 204 aaPredicted RBP33.83■■■■□ 3.01
CAPNS1-214ENST00000592483 SPATA31A1Q5TZJ5 1347 aa33.82■■■■□ 3.01
CAPNS1-214ENST00000592483 TRPM3Q9HCF6 1732 aaPredicted RBP33.82■■■■□ 3
CAPNS1-214ENST00000592483 SPON1Q9HCB6 807 aa33.82■■■■□ 3
CAPNS1-214ENST00000592483 C14orf93Q9H972 538 aaKnown RBP33.81■■■■□ 3
CAPNS1-214ENST00000592483 GPRASP1Q5JY77 1395 aa33.81■■■■□ 3
CAPNS1-214ENST00000592483 ALS2Q96Q42 1657 aa33.8■■■■□ 3
CAPNS1-214ENST00000592483 PRDM11Q9NQV5 511 aa33.8■■■■□ 3
CAPNS1-214ENST00000592483 SAFB2Q14151 953 aaKnown RBP eCLIP33.79■■■■□ 3
CAPNS1-214ENST00000592483 PRAM1Q96QH2 718 aa33.79■■■■□ 3
CAPNS1-214ENST00000592483 NINLQ9Y2I6 1382 aa33.79■■■■□ 3
CAPNS1-214ENST00000592483 RREB1Q92766 1687 aa33.78■■■■□ 3
CAPNS1-214ENST00000592483 L3MBTL2Q969R5 705 aa33.78■■■■□ 3
CAPNS1-214ENST00000592483 KCNQ2O43526 872 aa33.76■■■□□ 2.99
CAPNS1-214ENST00000592483 NUP188Q5SRE5 1749 aa33.74■■■□□ 2.99
CAPNS1-214ENST00000592483 ZEB1P37275 1124 aaPredicted RBP33.72■■■□□ 2.99
CAPNS1-214ENST00000592483 DCAF11Q8TEB1 546 aa33.72■■■□□ 2.99
CAPNS1-214ENST00000592483 PDE3BQ13370 1112 aa33.71■■■□□ 2.99
CAPNS1-214ENST00000592483 POGKQ9P215 609 aa33.71■■■□□ 2.99
CAPNS1-214ENST00000592483 CRYBG1Q9Y4K1 1723 aa33.7■■■□□ 2.98
CAPNS1-214ENST00000592483 CFAP70Q5T0N1 1121 aa33.69■■■□□ 2.98
CAPNS1-214ENST00000592483 STRN4Q9NRL3 753 aa33.68■■■□□ 2.98
CAPNS1-214ENST00000592483 BARGINQ6ZT62 677 aa33.67■■■□□ 2.98
CAPNS1-214ENST00000592483 PAK3O75914 559 aaPredicted RBP33.66■■■□□ 2.98
CAPNS1-214ENST00000592483 KIAA0232Q92628 1395 aa33.66■■■□□ 2.98
CAPNS1-214ENST00000592483 DLC1Q96QB1 1528 aa33.64■■■□□ 2.98
CAPNS1-214ENST00000592483 EIF3AQ14152 1382 aaKnown RBP33.64■■■□□ 2.98
CAPNS1-214ENST00000592483 CHRNA2Q15822 529 aa33.64■■■□□ 2.98
CAPNS1-214ENST00000592483 USP35Q9P2H5 1018 aa33.63■■■□□ 2.97
CAPNS1-214ENST00000592483 PRR36Q9H6K5 1346 aa33.62■■■□□ 2.97
CAPNS1-214ENST00000592483 NGDNQ8NEJ9 315 aaKnown RBP33.62■■■□□ 2.97
CAPNS1-214ENST00000592483 KDM2AQ9Y2K7 1162 aa33.61■■■□□ 2.97
CAPNS1-214ENST00000592483 ZNF784Q8NCA9 323 aaPredicted RBP33.6■■■□□ 2.97
CAPNS1-214ENST00000592483 HIRIP3Q9BW71 556 aaPredicted RBP33.6■■■□□ 2.97
CAPNS1-214ENST00000592483 EVA1CP58658 441 aa33.59■■■□□ 2.97
CAPNS1-214ENST00000592483 CAMTA1Q9Y6Y1 1673 aa33.58■■■□□ 2.97
CAPNS1-214ENST00000592483 ZC3H6P61129 1189 aaKnown RBP33.56■■■□□ 2.96
CAPNS1-214ENST00000592483 TULP4Q9NRJ4 1543 aa33.56■■■□□ 2.96
CAPNS1-214ENST00000592483 SSH2Q76I76 1423 aa33.54■■■□□ 2.96
CAPNS1-214ENST00000592483 C11orf95C9JLR9 678 aaPredicted RBP33.54■■■□□ 2.96
CAPNS1-214ENST00000592483 TCP11L2Q8N4U5 519 aa33.54■■■□□ 2.96
CAPNS1-214ENST00000592483 MINK1Q8N4C8 1332 aaPredicted RBP33.53■■■□□ 2.96
CAPNS1-214ENST00000592483 KIAA1210Q9ULL0 1709 aa33.53■■■□□ 2.96
CAPNS1-214ENST00000592483 WASLO00401 505 aaPredicted RBP33.53■■■□□ 2.96
CAPNS1-214ENST00000592483 UTRNP46939 3433 aa33.52■■■□□ 2.96
CAPNS1-214ENST00000592483 SENP3-EIF4A1A0A087X0R7 540 aa33.5■■■□□ 2.95
CAPNS1-214ENST00000592483 LARP1Q6PKG0 1096 aaKnown RBP33.49■■■□□ 2.95
CAPNS1-214ENST00000592483 TRAK1Q9UPV9 953 aa33.49■■■□□ 2.95
CAPNS1-214ENST00000592483 THRAP3Q9Y2W1 955 aaKnown RBP33.49■■■□□ 2.95
CAPNS1-214ENST00000592483 PHRF1Q9P1Y6 1649 aaKnown RBP33.49■■■□□ 2.95
CAPNS1-214ENST00000592483 PLSCR1O15162 318 aa33.47■■■□□ 2.95
CAPNS1-214ENST00000592483 TRPM1Q7Z4N2 1603 aa33.46■■■□□ 2.95
CAPNS1-214ENST00000592483 IFFO2Q5TF58 517 aa33.45■■■□□ 2.95
CAPNS1-214ENST00000592483 ATP7BP35670 1465 aa33.44■■■□□ 2.94
CAPNS1-214ENST00000592483 ADGRB1O14514 1584 aa33.43■■■□□ 2.94
CAPNS1-214ENST00000592483 NRKQ7Z2Y5 1582 aa33.43■■■□□ 2.94
CAPNS1-214ENST00000592483 C1QTNF8P60827 252 aa33.43■■■□□ 2.94
CAPNS1-214ENST00000592483 NUTM2GQ5VZR2 741 aa33.43■■■□□ 2.94
CAPNS1-214ENST00000592483 RGPD3A6NKT7 1758 aaPredicted RBP33.42■■■□□ 2.94
CAPNS1-214ENST00000592483 RGPD4Q7Z3J3 1758 aa33.42■■■□□ 2.94
CAPNS1-214ENST00000592483 CASZ1Q86V15 1759 aa33.42■■■□□ 2.94
CAPNS1-214ENST00000592483 ANO8Q9HCE9 1232 aaPredicted RBP33.42■■■□□ 2.94
CAPNS1-214ENST00000592483 PTGER2P43116 358 aa33.39■■■□□ 2.94
CAPNS1-214ENST00000592483 PDGFDQ9GZP0 370 aaPredicted RBP33.39■■■□□ 2.94
CAPNS1-214ENST00000592483 PARP4Q9UKK3 1724 aaKnown RBP33.39■■■□□ 2.94
CAPNS1-214ENST00000592483 CPDO75976 1380 aa33.38■■■□□ 2.93
CAPNS1-214ENST00000592483 ZBTB7AO95365 584 aa33.38■■■□□ 2.93
CAPNS1-214ENST00000592483 NUDT16Q96DE0 195 aaKnown RBP33.38■■■□□ 2.93
CAPNS1-214ENST00000592483 OVOS2A0A0G2JMS6 1433 aa33.37■■■□□ 2.93
CAPNS1-214ENST00000592483 OVOS2A0A0J9YW53 1432 aa33.37■■■□□ 2.93
CAPNS1-214ENST00000592483 OVOS2Q6IE36 1432 aa33.37■■■□□ 2.93
CAPNS1-214ENST00000592483 ITSN1Q15811 1721 aa33.36■■■□□ 2.93
CAPNS1-214ENST00000592483 LMO7Q8WWI1 1683 aa33.36■■■□□ 2.93
CAPNS1-214ENST00000592483 ROCK2O75116 1388 aaKnown RBP33.35■■■□□ 2.93
CAPNS1-214ENST00000592483 PEAK1Q9H792 1746 aa33.34■■■□□ 2.93
CAPNS1-214ENST00000592483 MYOM1P52179 1685 aa33.34■■■□□ 2.93
CAPNS1-214ENST00000592483 SYT17Q9BSW7 474 aa33.34■■■□□ 2.93
CAPNS1-214ENST00000592483 BCL11BQ9C0K0 894 aaPredicted RBP33.34■■■□□ 2.93
CAPNS1-214ENST00000592483 CHD4Q14839 1912 aa33.32■■■□□ 2.92
CAPNS1-214ENST00000592483 ATF5Q9Y2D1 282 aaPredicted RBP33.32■■■□□ 2.92
CAPNS1-214ENST00000592483 PROM2Q8N271 834 aa33.31■■■□□ 2.92
CAPNS1-214ENST00000592483 FHDC1Q9C0D6 1143 aaPredicted RBP33.31■■■□□ 2.92
CAPNS1-214ENST00000592483 POLR3AO14802 1390 aaPredicted RBP33.31■■■□□ 2.92
CAPNS1-214ENST00000592483 SBF2Q86WG5 1849 aa33.3■■■□□ 2.92
CAPNS1-214ENST00000592483 ABTB2Q8N961 1025 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 689.4 ms