RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 PNMA1Q8ND90 353 aa12.57□□□□□ -0.4
NEDD4L-230ENST00000590638 COPS2P61201 443 aa12.56□□□□□ -0.4
NEDD4L-230ENST00000590638 CCDC82Q8N4S0 544 aa12.56□□□□□ -0.4
NEDD4L-230ENST00000590638 NYAP1Q6ZVC0 841 aa12.55□□□□□ -0.4
NEDD4L-230ENST00000590638 CUX1P39880 1505 aa12.54□□□□□ -0.4
NEDD4L-230ENST00000590638 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
NEDD4L-230ENST00000590638 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
NEDD4L-230ENST00000590638 PER1O15534 1290 aaPredicted RBP12.53□□□□□ -0.4
NEDD4L-230ENST00000590638 NR6A1Q15406 480 aa12.53□□□□□ -0.4
NEDD4L-230ENST00000590638 TRIM34Q9BYJ4 488 aa12.53□□□□□ -0.4
NEDD4L-230ENST00000590638 SERPINA10Q9UK55 444 aa12.53□□□□□ -0.4
NEDD4L-230ENST00000590638 PTPN5P54829 565 aa12.52□□□□□ -0.41
NEDD4L-230ENST00000590638 WASHC4Q2M389 1173 aa12.52□□□□□ -0.41
NEDD4L-230ENST00000590638 LYPD8Q6UX82 237 aa12.52□□□□□ -0.41
NEDD4L-230ENST00000590638 SPSB2Q99619 263 aa12.51□□□□□ -0.41
NEDD4L-230ENST00000590638 JUNDP17535 347 aa12.5□□□□□ -0.41
NEDD4L-230ENST00000590638 THAP11Q96EK4 314 aa12.5□□□□□ -0.41
NEDD4L-230ENST00000590638 CALR3Q96L12 384 aaKnown RBP12.5□□□□□ -0.41
NEDD4L-230ENST00000590638 KIF21AQ7Z4S6 1674 aa12.5□□□□□ -0.41
NEDD4L-230ENST00000590638 EPS8L1Q8TE68 723 aa12.49□□□□□ -0.41
NEDD4L-230ENST00000590638 DNMBPQ6XZF7 1577 aa12.48□□□□□ -0.41
NEDD4L-230ENST00000590638 EEA1Q15075 1411 aa12.48□□□□□ -0.41
NEDD4L-230ENST00000590638 PLSCR2Q9NRY7 297 aa12.48□□□□□ -0.41
NEDD4L-230ENST00000590638 CTHP32929 405 aa12.47□□□□□ -0.41
NEDD4L-230ENST00000590638 IRF5Q13568 498 aa12.46□□□□□ -0.41
NEDD4L-230ENST00000590638 PTPRNQ16849 979 aa12.46□□□□□ -0.41
NEDD4L-230ENST00000590638 MSS51Q4VC12 460 aa12.46□□□□□ -0.41
NEDD4L-230ENST00000590638 FAM9AQ8IZU1 332 aaPredicted RBP12.46□□□□□ -0.41
NEDD4L-230ENST00000590638 GLMNQ92990 594 aa12.46□□□□□ -0.41
NEDD4L-230ENST00000590638 POM121CA8CG34 1229 aa12.45□□□□□ -0.42
NEDD4L-230ENST00000590638 VAC14Q08AM6 782 aa12.45□□□□□ -0.42
NEDD4L-230ENST00000590638 MTRQ99707 1265 aa12.45□□□□□ -0.42
NEDD4L-230ENST00000590638 TOPBP1Q92547 1522 aa12.45□□□□□ -0.42
NEDD4L-230ENST00000590638 SOGA1O94964 1423 aa12.45□□□□□ -0.42
NEDD4L-230ENST00000590638 ZPR1O75312 459 aa12.44□□□□□ -0.42
NEDD4L-230ENST00000590638 IL21Q9HBE4 155 aa12.43□□□□□ -0.42
NEDD4L-230ENST00000590638 MYT1LQ9UL68 1186 aa12.43□□□□□ -0.42
NEDD4L-230ENST00000590638 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
NEDD4L-230ENST00000590638 FGD5Q6ZNL6 1462 aa12.42□□□□□ -0.42
NEDD4L-230ENST00000590638 TLL1O43897 1013 aa12.42□□□□□ -0.42
NEDD4L-230ENST00000590638 ADH1BP00325 375 aa12.42□□□□□ -0.42
NEDD4L-230ENST00000590638 CCNYL3P0C7X3 344 aa12.42□□□□□ -0.42
NEDD4L-230ENST00000590638 NUDT12Q9BQG2 462 aa12.42□□□□□ -0.42
NEDD4L-230ENST00000590638 HDGFL1Q5TGJ6 251 aa12.41□□□□□ -0.42
NEDD4L-230ENST00000590638 FAM160A2Q8N612 972 aaPredicted RBP12.41□□□□□ -0.42
NEDD4L-230ENST00000590638 MAP10Q9P2G4 905 aa12.41□□□□□ -0.42
NEDD4L-230ENST00000590638 MRC2Q9UBG0 1479 aa12.4□□□□□ -0.42
NEDD4L-230ENST00000590638 DXOO77932 396 aaKnown RBP12.4□□□□□ -0.42
NEDD4L-230ENST00000590638 PRDM9Q9NQV7 894 aa12.4□□□□□ -0.42
NEDD4L-230ENST00000590638 FKBPLQ9UIM3 349 aa12.4□□□□□ -0.42
NEDD4L-230ENST00000590638 RUSC2Q8N2Y8 1516 aa12.39□□□□□ -0.43
NEDD4L-230ENST00000590638 F12P00748 615 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-230ENST00000590638 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
NEDD4L-230ENST00000590638 GPR37L1O60883 481 aa12.38□□□□□ -0.43
NEDD4L-230ENST00000590638 MMP16P51512 607 aa12.38□□□□□ -0.43
NEDD4L-230ENST00000590638 SEMA3FQ13275 785 aa12.38□□□□□ -0.43
NEDD4L-230ENST00000590638 CCDC24Q8N4L8 307 aa12.38□□□□□ -0.43
NEDD4L-230ENST00000590638 ARMC2Q8NEN0 867 aa12.38□□□□□ -0.43
NEDD4L-230ENST00000590638 SLC6A16Q9GZN6 736 aa12.38□□□□□ -0.43
NEDD4L-230ENST00000590638 SOX11P35716 441 aa12.37□□□□□ -0.43
NEDD4L-230ENST00000590638 EIF4G2P78344 907 aaKnown RBP eCLIP12.37□□□□□ -0.43
NEDD4L-230ENST00000590638 POLA1P09884 1462 aaPredicted RBP12.37□□□□□ -0.43
NEDD4L-230ENST00000590638 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
NEDD4L-230ENST00000590638 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
NEDD4L-230ENST00000590638 KCNH2Q12809 1159 aa12.36□□□□□ -0.43
NEDD4L-230ENST00000590638 EVA1BQ9NVM1 165 aa12.36□□□□□ -0.43
NEDD4L-230ENST00000590638 TJAP1Q5JTD0 557 aa12.35□□□□□ -0.43
NEDD4L-230ENST00000590638 ZNF516Q92618 1163 aa12.35□□□□□ -0.43
NEDD4L-230ENST00000590638 WDR62O43379 1518 aa12.34□□□□□ -0.43
NEDD4L-230ENST00000590638 NR1H3Q13133 447 aa12.34□□□□□ -0.43
NEDD4L-230ENST00000590638 THOC2Q8NI27 1593 aaKnown RBP12.34□□□□□ -0.43
NEDD4L-230ENST00000590638 ABCA10Q8WWZ4 1543 aa12.33□□□□□ -0.44
NEDD4L-230ENST00000590638 ZBBXA8MT70 800 aa12.33□□□□□ -0.44
NEDD4L-230ENST00000590638 NBPF14Q5TI25 921 aa12.33□□□□□ -0.44
NEDD4L-230ENST00000590638 PTK2Q05397 1052 aa12.31□□□□□ -0.44
NEDD4L-230ENST00000590638 GPKOWQ92917 476 aaPredicted RBP eCLIP12.31□□□□□ -0.44
NEDD4L-230ENST00000590638 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
NEDD4L-230ENST00000590638 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
NEDD4L-230ENST00000590638 WDR97A6NE52 1622 aa12.3□□□□□ -0.44
NEDD4L-230ENST00000590638 KIF21BO75037 1637 aa12.3□□□□□ -0.44
NEDD4L-230ENST00000590638 FBXO45P0C2W1 286 aa12.3□□□□□ -0.44
NEDD4L-230ENST00000590638 ADAMTS19Q8TE59 1207 aa12.3□□□□□ -0.44
NEDD4L-230ENST00000590638 ALG2Q9H553 416 aa12.29□□□□□ -0.44
NEDD4L-230ENST00000590638 S1PR4O95977 384 aa12.28□□□□□ -0.44
NEDD4L-230ENST00000590638 ZNF592Q92610 1267 aa12.28□□□□□ -0.44
NEDD4L-230ENST00000590638 RNF166Q96A37 237 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-230ENST00000590638 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
NEDD4L-230ENST00000590638 TARBP1Q13395 1621 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-230ENST00000590638 GOLGA3Q08378 1498 aa12.27□□□□□ -0.44
NEDD4L-230ENST00000590638 PDXDC2PQ6P474 469 aa12.27□□□□□ -0.45
NEDD4L-230ENST00000590638 NKX2-3Q8TAU0 364 aa12.27□□□□□ -0.45
NEDD4L-230ENST00000590638 GPSM3Q9Y4H4 160 aa12.27□□□□□ -0.45
NEDD4L-230ENST00000590638 RFX1P22670 979 aa12.25□□□□□ -0.45
NEDD4L-230ENST00000590638 KCNC4Q03721 635 aa12.25□□□□□ -0.45
NEDD4L-230ENST00000590638 ARHGAP9Q9BRR9 750 aa12.25□□□□□ -0.45
NEDD4L-230ENST00000590638 PPP1R12CQ9BZL4 782 aa12.25□□□□□ -0.45
NEDD4L-230ENST00000590638 FCF1Q9Y324 198 aaKnown RBP12.25□□□□□ -0.45
NEDD4L-230ENST00000590638 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
NEDD4L-230ENST00000590638 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
NEDD4L-230ENST00000590638 PPP1R15AO75807 674 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms