RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 SGIP1Q9BQI5 828 aa9.95□□□□□ -0.82
DNMT1-222ENST00000590619 PRDM11Q9NQV5 511 aa9.95□□□□□ -0.82
DNMT1-222ENST00000590619 ABCC11Q96J66 1382 aa9.95□□□□□ -0.82
DNMT1-222ENST00000590619 THSD7AQ9UPZ6 1657 aa9.95□□□□□ -0.82
DNMT1-222ENST00000590619 NUP188Q5SRE5 1749 aa9.94□□□□□ -0.82
DNMT1-222ENST00000590619 ADGRB2O60241 1585 aa9.94□□□□□ -0.82
DNMT1-222ENST00000590619 ADGRF5Q8IZF2 1346 aa9.94□□□□□ -0.82
DNMT1-222ENST00000590619 GPR162Q16538 588 aa9.94□□□□□ -0.82
DNMT1-222ENST00000590619 PTF1AQ7RTS3 328 aa9.94□□□□□ -0.82
DNMT1-222ENST00000590619 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
DNMT1-222ENST00000590619 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-222ENST00000590619 NRAPQ86VF7 1730 aa9.93□□□□□ -0.82
DNMT1-222ENST00000590619 RREB1Q92766 1687 aa9.93□□□□□ -0.82
DNMT1-222ENST00000590619 EVA1CP58658 441 aa9.93□□□□□ -0.82
DNMT1-222ENST00000590619 RRBP1Q9P2E9 1410 aaKnown RBP9.92□□□□□ -0.82
DNMT1-222ENST00000590619 ROCK1Q13464 1354 aa9.92□□□□□ -0.82
DNMT1-222ENST00000590619 ARXQ96QS3 562 aa9.92□□□□□ -0.82
DNMT1-222ENST00000590619 NRKQ7Z2Y5 1582 aa9.92□□□□□ -0.82
DNMT1-222ENST00000590619 NRXN1Q9ULB1 1477 aa9.91□□□□□ -0.82
DNMT1-222ENST00000590619 TECPR2O15040 1411 aa9.91□□□□□ -0.82
DNMT1-222ENST00000590619 HSPA6P17066 643 aa9.91□□□□□ -0.82
DNMT1-222ENST00000590619 ZC3H6P61129 1189 aaKnown RBP9.91□□□□□ -0.82
DNMT1-222ENST00000590619 LARP1Q6PKG0 1096 aaKnown RBP9.91□□□□□ -0.82
DNMT1-222ENST00000590619 TCP11L2Q8N4U5 519 aa9.91□□□□□ -0.82
DNMT1-222ENST00000590619 MTFR1LQ9H019 292 aa9.91□□□□□ -0.82
DNMT1-222ENST00000590619 CHD4Q14839 1912 aa9.91□□□□□ -0.82
DNMT1-222ENST00000590619 CLTCL1P53675 1640 aa9.9□□□□□ -0.82
DNMT1-222ENST00000590619 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.82
DNMT1-222ENST00000590619 SLC15A2Q16348 729 aa9.9□□□□□ -0.82
DNMT1-222ENST00000590619 COL14A1Q05707 1796 aaKnown RBP9.9□□□□□ -0.82
DNMT1-222ENST00000590619 KIAA0232Q92628 1395 aa9.89□□□□□ -0.83
DNMT1-222ENST00000590619 PAK3O75914 559 aaPredicted RBP9.89□□□□□ -0.83
DNMT1-222ENST00000590619 STK32BQ9NY57 414 aa9.89□□□□□ -0.83
DNMT1-222ENST00000590619 KIF1AQ12756 1690 aa9.89□□□□□ -0.83
DNMT1-222ENST00000590619 ITGAEP38570 1179 aa9.88□□□□□ -0.83
DNMT1-222ENST00000590619 SAFB2Q14151 953 aaKnown RBP eCLIP9.88□□□□□ -0.83
DNMT1-222ENST00000590619 THRAP3Q9Y2W1 955 aaKnown RBP9.88□□□□□ -0.83
DNMT1-222ENST00000590619 GPRASP1Q5JY77 1395 aa9.88□□□□□ -0.83
DNMT1-222ENST00000590619 FMN2Q9NZ56 1722 aa9.87□□□□□ -0.83
DNMT1-222ENST00000590619 ACIN1Q9UKV3 1341 aaKnown RBP9.87□□□□□ -0.83
DNMT1-222ENST00000590619 MYOM1P52179 1685 aa9.87□□□□□ -0.83
DNMT1-222ENST00000590619 TXNRD1Q16881 649 aa9.87□□□□□ -0.83
DNMT1-222ENST00000590619 RGL3Q3MIN7 710 aa9.87□□□□□ -0.83
DNMT1-222ENST00000590619 CASZ1Q86V15 1759 aa9.87□□□□□ -0.83
DNMT1-222ENST00000590619 ABCA3Q99758 1704 aa9.87□□□□□ -0.83
DNMT1-222ENST00000590619 RGPD8O14715 1765 aaPredicted RBP9.86□□□□□ -0.83
DNMT1-222ENST00000590619 PELP1Q8IZL8 1130 aaKnown RBP9.86□□□□□ -0.83
DNMT1-222ENST00000590619 PRAM1Q96QH2 718 aa9.86□□□□□ -0.83
DNMT1-222ENST00000590619 MAP3K5Q99683 1374 aa9.86□□□□□ -0.83
DNMT1-222ENST00000590619 YTHDC2Q9H6S0 1430 aaKnown RBP9.85□□□□□ -0.83
DNMT1-222ENST00000590619 DNAJC5GQ8N7S2 189 aa9.85□□□□□ -0.83
DNMT1-222ENST00000590619 SSH2Q76I76 1423 aa9.84□□□□□ -0.83
DNMT1-222ENST00000590619 CAPN15O75808 1086 aa9.84□□□□□ -0.83
DNMT1-222ENST00000590619 COL13A1Q5TAT6 717 aaPredicted RBP9.84□□□□□ -0.83
DNMT1-222ENST00000590619 NUTM2GQ5VZR2 741 aa9.84□□□□□ -0.83
DNMT1-222ENST00000590619 NGDNQ8NEJ9 315 aaKnown RBP9.84□□□□□ -0.83
DNMT1-222ENST00000590619 C14orf93Q9H972 538 aaKnown RBP9.84□□□□□ -0.83
DNMT1-222ENST00000590619 PRR36Q9H6K5 1346 aa9.83□□□□□ -0.84
DNMT1-222ENST00000590619 DLC1Q96QB1 1528 aa9.83□□□□□ -0.84
DNMT1-222ENST00000590619 MARCH10Q8NA82 808 aaPredicted RBP9.83□□□□□ -0.84
DNMT1-222ENST00000590619 KIF1BO60333 1816 aa9.83□□□□□ -0.84
DNMT1-222ENST00000590619 GRIN3BO60391 1043 aa9.82□□□□□ -0.84
DNMT1-222ENST00000590619 YBX3P16989 372 aaKnown RBP eCLIP9.82□□□□□ -0.84
DNMT1-222ENST00000590619 DDB1Q16531 1140 aa9.82□□□□□ -0.84
DNMT1-222ENST00000590619 NLGN2Q8NFZ4 835 aa9.82□□□□□ -0.84
DNMT1-222ENST00000590619 HIRIP3Q9BW71 556 aaPredicted RBP9.82□□□□□ -0.84
DNMT1-222ENST00000590619 GPBP1L1Q9HC44 474 aaPredicted RBP9.82□□□□□ -0.84
DNMT1-222ENST00000590619 POGKQ9P215 609 aa9.82□□□□□ -0.84
DNMT1-222ENST00000590619 DHX57Q6P158 1386 aaKnown RBP9.82□□□□□ -0.84
DNMT1-222ENST00000590619 SHANK3Q9BYB0 1731 aa9.82□□□□□ -0.84
DNMT1-222ENST00000590619 ANKARQ7Z5J8 1434 aa9.82□□□□□ -0.84
DNMT1-222ENST00000590619 CFAP70Q5T0N1 1121 aa9.81□□□□□ -0.84
DNMT1-222ENST00000590619 KLHL34Q8N239 644 aa9.81□□□□□ -0.84
DNMT1-222ENST00000590619 OVOS2A0A0G2JMS6 1433 aa9.81□□□□□ -0.84
DNMT1-222ENST00000590619 OVOS2A0A0J9YW53 1432 aa9.81□□□□□ -0.84
DNMT1-222ENST00000590619 OVOS2Q6IE36 1432 aa9.81□□□□□ -0.84
DNMT1-222ENST00000590619 GOLGB1Q14789 3259 aaKnown RBP9.8□□□□□ -0.84
DNMT1-222ENST00000590619 TRPM3Q9HCF6 1732 aaPredicted RBP9.8□□□□□ -0.84
DNMT1-222ENST00000590619 PRELPP51888 382 aa9.8□□□□□ -0.84
DNMT1-222ENST00000590619 ATP10DQ9P241 1426 aa9.8□□□□□ -0.84
DNMT1-222ENST00000590619 ALS2Q96Q42 1657 aa9.8□□□□□ -0.84
DNMT1-222ENST00000590619 ANKRD30BQ9BXX2 1392 aa9.79□□□□□ -0.84
DNMT1-222ENST00000590619 WASLO00401 505 aaPredicted RBP9.79□□□□□ -0.84
DNMT1-222ENST00000590619 ZNF526Q8TF50 670 aaPredicted RBP9.79□□□□□ -0.84
DNMT1-222ENST00000590619 PPLO60437 1756 aa9.78□□□□□ -0.84
DNMT1-222ENST00000590619 SLC4A1APQ9BWU0 796 aaKnown RBP9.78□□□□□ -0.84
DNMT1-222ENST00000590619 MINK1Q8N4C8 1332 aaPredicted RBP9.78□□□□□ -0.84
DNMT1-222ENST00000590619 KIF3CO14782 793 aa9.77□□□□□ -0.85
DNMT1-222ENST00000590619 SLC34A2O95436 690 aa9.77□□□□□ -0.85
DNMT1-222ENST00000590619 GCP02774 474 aa9.77□□□□□ -0.85
DNMT1-222ENST00000590619 APLP1P51693 650 aa9.77□□□□□ -0.85
DNMT1-222ENST00000590619 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
DNMT1-222ENST00000590619 CPDO75976 1380 aa9.76□□□□□ -0.85
DNMT1-222ENST00000590619 PEAK1Q9H792 1746 aa9.76□□□□□ -0.85
DNMT1-222ENST00000590619 BCL9O00512 1426 aa9.76□□□□□ -0.85
DNMT1-222ENST00000590619 PIK3C2GO75747 1445 aa9.76□□□□□ -0.85
DNMT1-222ENST00000590619 POLD1P28340 1107 aa9.76□□□□□ -0.85
DNMT1-222ENST00000590619 ZNF827Q17R98 1081 aa9.76□□□□□ -0.85
DNMT1-222ENST00000590619 ABTB2Q8N961 1025 aa9.76□□□□□ -0.85
DNMT1-222ENST00000590619 ATP7BP35670 1465 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms