RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 DCAF8L1A6NGE4 600 aa20.4■□□□□ 0.86
LSM12-203ENST00000590563 NRKQ7Z2Y5 1582 aa20.39■□□□□ 0.85
LSM12-203ENST00000590563 SPATA31A1Q5TZJ5 1347 aa20.38■□□□□ 0.85
LSM12-203ENST00000590563 C1QTNF8P60827 252 aa20.38■□□□□ 0.85
LSM12-203ENST00000590563 CASZ1Q86V15 1759 aa20.38■□□□□ 0.85
LSM12-203ENST00000590563 YTHDC2Q9H6S0 1430 aaKnown RBP20.37■□□□□ 0.85
LSM12-203ENST00000590563 NBPF8Q3BBV2 869 aa20.37■□□□□ 0.85
LSM12-203ENST00000590563 NBPF14Q5TI25 921 aa20.37■□□□□ 0.85
LSM12-203ENST00000590563 TMEM132EQ6IEE7 984 aa20.37■□□□□ 0.85
LSM12-203ENST00000590563 ITGAEP38570 1179 aa20.35■□□□□ 0.85
LSM12-203ENST00000590563 MYOM1P52179 1685 aa20.34■□□□□ 0.85
LSM12-203ENST00000590563 PIK3C2GO75747 1445 aa20.34■□□□□ 0.85
LSM12-203ENST00000590563 UTRNP46939 3433 aa20.33■□□□□ 0.84
LSM12-203ENST00000590563 PMFBP1Q8TBY8 1022 aa20.32■□□□□ 0.84
LSM12-203ENST00000590563 ANKARQ7Z5J8 1434 aa20.32■□□□□ 0.84
LSM12-203ENST00000590563 SIRT1Q96EB6 747 aa20.3■□□□□ 0.84
LSM12-203ENST00000590563 ANO8Q9HCE9 1232 aaPredicted RBP20.29■□□□□ 0.84
LSM12-203ENST00000590563 SPATA31E1Q6ZUB1 1445 aa20.28■□□□□ 0.84
LSM12-203ENST00000590563 PRDM11Q9NQV5 511 aa20.28■□□□□ 0.84
LSM12-203ENST00000590563 RGPD3A6NKT7 1758 aaPredicted RBP20.28■□□□□ 0.84
LSM12-203ENST00000590563 RGPD4Q7Z3J3 1758 aa20.28■□□□□ 0.84
LSM12-203ENST00000590563 PDGFDQ9GZP0 370 aaPredicted RBP20.27■□□□□ 0.84
LSM12-203ENST00000590563 KIAA0232Q92628 1395 aa20.26■□□□□ 0.83
LSM12-203ENST00000590563 PTGER2P43116 358 aa20.26■□□□□ 0.83
LSM12-203ENST00000590563 PHRF1Q9P1Y6 1649 aaKnown RBP20.26■□□□□ 0.83
LSM12-203ENST00000590563 ACIN1Q9UKV3 1341 aaKnown RBP20.26■□□□□ 0.83
LSM12-203ENST00000590563 ANKRD30BQ9BXX2 1392 aa20.25■□□□□ 0.83
LSM12-203ENST00000590563 BARGINQ6ZT62 677 aa20.25■□□□□ 0.83
LSM12-203ENST00000590563 SSH2Q76I76 1423 aa20.24■□□□□ 0.83
LSM12-203ENST00000590563 CHRNA2Q15822 529 aa20.23■□□□□ 0.83
LSM12-203ENST00000590563 PEAK1Q9H792 1746 aa20.23■□□□□ 0.83
LSM12-203ENST00000590563 STRN4Q9NRL3 753 aa20.23■□□□□ 0.83
LSM12-203ENST00000590563 PDE3BQ13370 1112 aa20.22■□□□□ 0.83
LSM12-203ENST00000590563 PRR36Q9H6K5 1346 aa20.22■□□□□ 0.83
LSM12-203ENST00000590563 GPRASP1Q5JY77 1395 aa20.21■□□□□ 0.83
LSM12-203ENST00000590563 SAFB2Q14151 953 aaKnown RBP eCLIP20.21■□□□□ 0.83
LSM12-203ENST00000590563 USP35Q9P2H5 1018 aa20.21■□□□□ 0.83
LSM12-203ENST00000590563 CHD4Q14839 1912 aa20.2■□□□□ 0.82
LSM12-203ENST00000590563 PARP4Q9UKK3 1724 aaKnown RBP20.2■□□□□ 0.82
LSM12-203ENST00000590563 ZBTB7AO95365 584 aa20.2■□□□□ 0.82
LSM12-203ENST00000590563 PRAM1Q96QH2 718 aa20.2■□□□□ 0.82
LSM12-203ENST00000590563 DLC1Q96QB1 1528 aa20.19■□□□□ 0.82
LSM12-203ENST00000590563 RGL3Q3MIN7 710 aa20.19■□□□□ 0.82
LSM12-203ENST00000590563 FHDC1Q9C0D6 1143 aaPredicted RBP20.19■□□□□ 0.82
LSM12-203ENST00000590563 TULP4Q9NRJ4 1543 aa20.18■□□□□ 0.82
LSM12-203ENST00000590563 SYT17Q9BSW7 474 aa20.18■□□□□ 0.82
LSM12-203ENST00000590563 LMO7Q8WWI1 1683 aa20.18■□□□□ 0.82
LSM12-203ENST00000590563 C14orf93Q9H972 538 aaKnown RBP20.17■□□□□ 0.82
LSM12-203ENST00000590563 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
LSM12-203ENST00000590563 PLSCR1O15162 318 aa20.15■□□□□ 0.82
LSM12-203ENST00000590563 LARP1Q6PKG0 1096 aaKnown RBP20.15■□□□□ 0.82
LSM12-203ENST00000590563 OVOS2A0A0G2JMS6 1433 aa20.14■□□□□ 0.81
LSM12-203ENST00000590563 OVOS2A0A0J9YW53 1432 aa20.14■□□□□ 0.81
LSM12-203ENST00000590563 OVOS2Q6IE36 1432 aa20.14■□□□□ 0.81
LSM12-203ENST00000590563 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.81
LSM12-203ENST00000590563 TCP11L2Q8N4U5 519 aa20.14■□□□□ 0.81
LSM12-203ENST00000590563 SGIP1Q9BQI5 828 aa20.14■□□□□ 0.81
LSM12-203ENST00000590563 ATF5Q9Y2D1 282 aaPredicted RBP20.14■□□□□ 0.81
LSM12-203ENST00000590563 SBF2Q86WG5 1849 aa20.13■□□□□ 0.81
LSM12-203ENST00000590563 ZC3H6P61129 1189 aaKnown RBP20.13■□□□□ 0.81
LSM12-203ENST00000590563 PTF1AQ7RTS3 328 aa20.13■□□□□ 0.81
LSM12-203ENST00000590563 PROM2Q8N271 834 aa20.13■□□□□ 0.81
LSM12-203ENST00000590563 LRRC37A3O60309 1634 aa20.13■□□□□ 0.81
LSM12-203ENST00000590563 GIGYF1O75420 1035 aaPredicted RBP20.12■□□□□ 0.81
LSM12-203ENST00000590563 CFAP70Q5T0N1 1121 aa20.12■□□□□ 0.81
LSM12-203ENST00000590563 ATP7BP35670 1465 aa20.11■□□□□ 0.81
LSM12-203ENST00000590563 PAK3O75914 559 aaPredicted RBP20.11■□□□□ 0.81
LSM12-203ENST00000590563 CEP350Q5VT06 3117 aa20.11■□□□□ 0.81
LSM12-203ENST00000590563 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
LSM12-203ENST00000590563 HIRIP3Q9BW71 556 aaPredicted RBP20.1■□□□□ 0.81
LSM12-203ENST00000590563 THRAP3Q9Y2W1 955 aaKnown RBP20.09■□□□□ 0.81
LSM12-203ENST00000590563 EIF3AQ14152 1382 aaKnown RBP20.08■□□□□ 0.81
LSM12-203ENST00000590563 MAP3K5Q99683 1374 aa20.08■□□□□ 0.81
LSM12-203ENST00000590563 ADGRB1O14514 1584 aa20.08■□□□□ 0.81
LSM12-203ENST00000590563 EVA1CP58658 441 aa20.08■□□□□ 0.81
LSM12-203ENST00000590563 C11orf95C9JLR9 678 aaPredicted RBP20.07■□□□□ 0.8
LSM12-203ENST00000590563 NGDNQ8NEJ9 315 aaKnown RBP20.07■□□□□ 0.8
LSM12-203ENST00000590563 BCL11BQ9C0K0 894 aaPredicted RBP20.07■□□□□ 0.8
LSM12-203ENST00000590563 POGKQ9P215 609 aa20.07■□□□□ 0.8
LSM12-203ENST00000590563 CPDO75976 1380 aa20.07■□□□□ 0.8
LSM12-203ENST00000590563 COL5A2P05997 1499 aaPredicted RBP20.06■□□□□ 0.8
LSM12-203ENST00000590563 NUTM2GQ5VZR2 741 aa20.05■□□□□ 0.8
LSM12-203ENST00000590563 MTFR1LQ9H019 292 aa20.05■□□□□ 0.8
LSM12-203ENST00000590563 MINK1Q8N4C8 1332 aaPredicted RBP20.04■□□□□ 0.8
LSM12-203ENST00000590563 WASLO00401 505 aaPredicted RBP20.03■□□□□ 0.8
LSM12-203ENST00000590563 SLC15A2Q16348 729 aa20.03■□□□□ 0.8
LSM12-203ENST00000590563 ITSN1Q15811 1721 aa20.02■□□□□ 0.8
LSM12-203ENST00000590563 BCL9O00512 1426 aa20.02■□□□□ 0.79
LSM12-203ENST00000590563 CRB1P82279 1406 aa20.02■□□□□ 0.79
LSM12-203ENST00000590563 USP19O94966 1318 aa20.02■□□□□ 0.79
LSM12-203ENST00000590563 STK32BQ9NY57 414 aa20.01■□□□□ 0.79
LSM12-203ENST00000590563 ARXQ96QS3 562 aa20■□□□□ 0.79
LSM12-203ENST00000590563 PAPPAQ13219 1627 aa20■□□□□ 0.79
LSM12-203ENST00000590563 WNK3Q9BYP7 1800 aa19.99■□□□□ 0.79
LSM12-203ENST00000590563 TXNRD1Q16881 649 aa19.99■□□□□ 0.79
LSM12-203ENST00000590563 AATKQ6ZMQ8 1374 aa19.98■□□□□ 0.79
LSM12-203ENST00000590563 TOPAZ1Q8N9V7 1692 aa19.98■□□□□ 0.79
LSM12-203ENST00000590563 POLR3AO14802 1390 aaPredicted RBP19.97■□□□□ 0.79
LSM12-203ENST00000590563 TRAK1Q9UPV9 953 aa19.97■□□□□ 0.79
LSM12-203ENST00000590563 GPR162Q16538 588 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms