RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 THSD7AQ9UPZ6 1657 aa25.77■■□□□ 1.72
RETREG3-210ENST00000590541 PRR36Q9H6K5 1346 aa25.76■■□□□ 1.71
RETREG3-210ENST00000590541 ACIN1Q9UKV3 1341 aaKnown RBP25.76■■□□□ 1.71
RETREG3-210ENST00000590541 TNS1Q9HBL0 1735 aaKnown RBP25.76■■□□□ 1.71
RETREG3-210ENST00000590541 CRYBG1Q9Y4K1 1723 aa25.75■■□□□ 1.71
RETREG3-210ENST00000590541 GPRASP1Q5JY77 1395 aa25.75■■□□□ 1.71
RETREG3-210ENST00000590541 HIRIP3Q9BW71 556 aaPredicted RBP25.75■■□□□ 1.71
RETREG3-210ENST00000590541 ADGRB1O14514 1584 aa25.74■■□□□ 1.71
RETREG3-210ENST00000590541 EZH2Q15910 746 aaKnown RBP25.73■■□□□ 1.71
RETREG3-210ENST00000590541 TULP4Q9NRJ4 1543 aa25.71■■□□□ 1.71
RETREG3-210ENST00000590541 TRAK1Q9UPV9 953 aa25.7■■□□□ 1.7
RETREG3-210ENST00000590541 MINK1Q8N4C8 1332 aaPredicted RBP25.69■■□□□ 1.7
RETREG3-210ENST00000590541 CAMKK2Q96RR4 588 aa25.69■■□□□ 1.7
RETREG3-210ENST00000590541 PRDM11Q9NQV5 511 aa25.69■■□□□ 1.7
RETREG3-210ENST00000590541 EIF3AQ14152 1382 aaKnown RBP25.69■■□□□ 1.7
RETREG3-210ENST00000590541 SPATA31A1Q5TZJ5 1347 aa25.68■■□□□ 1.7
RETREG3-210ENST00000590541 WASLO00401 505 aaPredicted RBP25.67■■□□□ 1.7
RETREG3-210ENST00000590541 PAK3O75914 559 aaPredicted RBP25.66■■□□□ 1.7
RETREG3-210ENST00000590541 TRIM37O94972 964 aa25.66■■□□□ 1.7
RETREG3-210ENST00000590541 NGDNQ8NEJ9 315 aaKnown RBP25.65■■□□□ 1.7
RETREG3-210ENST00000590541 FAM196AQ6ZSG2 479 aa25.64■■□□□ 1.7
RETREG3-210ENST00000590541 KIAA0232Q92628 1395 aa25.64■■□□□ 1.69
RETREG3-210ENST00000590541 CHRNA2Q15822 529 aa25.63■■□□□ 1.69
RETREG3-210ENST00000590541 STRN4Q9NRL3 753 aa25.61■■□□□ 1.69
RETREG3-210ENST00000590541 PARD3Q8TEW0 1356 aa25.6■■□□□ 1.69
RETREG3-210ENST00000590541 PHRF1Q9P1Y6 1649 aaKnown RBP25.6■■□□□ 1.69
RETREG3-210ENST00000590541 APBA3O96018 575 aa25.6■■□□□ 1.69
RETREG3-210ENST00000590541 ATP7BP35670 1465 aa25.58■■□□□ 1.69
RETREG3-210ENST00000590541 RREB1Q92766 1687 aa25.58■■□□□ 1.68
RETREG3-210ENST00000590541 ZC3H6P61129 1189 aaKnown RBP25.56■■□□□ 1.68
RETREG3-210ENST00000590541 ITSN1Q15811 1721 aa25.55■■□□□ 1.68
RETREG3-210ENST00000590541 BARGINQ6ZT62 677 aa25.55■■□□□ 1.68
RETREG3-210ENST00000590541 NUDT16Q96DE0 195 aaKnown RBP25.55■■□□□ 1.68
RETREG3-210ENST00000590541 USP35Q9P2H5 1018 aa25.55■■□□□ 1.68
RETREG3-210ENST00000590541 KDM2AQ9Y2K7 1162 aa25.55■■□□□ 1.68
RETREG3-210ENST00000590541 NUTM2GQ5VZR2 741 aa25.54■■□□□ 1.68
RETREG3-210ENST00000590541 NUP188Q5SRE5 1749 aa25.54■■□□□ 1.68
RETREG3-210ENST00000590541 SSH2Q76I76 1423 aa25.54■■□□□ 1.68
RETREG3-210ENST00000590541 DCAF11Q8TEB1 546 aa25.52■■□□□ 1.68
RETREG3-210ENST00000590541 ARHGEF28Q8N1W1 1705 aaKnown RBP25.51■■□□□ 1.68
RETREG3-210ENST00000590541 PDE3BQ13370 1112 aa25.51■■□□□ 1.67
RETREG3-210ENST00000590541 CAMTA1Q9Y6Y1 1673 aa25.5■■□□□ 1.67
RETREG3-210ENST00000590541 POLR3AO14802 1390 aaPredicted RBP25.49■■□□□ 1.67
RETREG3-210ENST00000590541 YY1P25490 414 aa25.49■■□□□ 1.67
RETREG3-210ENST00000590541 EVA1CP58658 441 aa25.49■■□□□ 1.67
RETREG3-210ENST00000590541 LARP1Q6PKG0 1096 aaKnown RBP25.49■■□□□ 1.67
RETREG3-210ENST00000590541 NRKQ7Z2Y5 1582 aa25.48■■□□□ 1.67
RETREG3-210ENST00000590541 NBPF8Q3BBV2 869 aa25.48■■□□□ 1.67
RETREG3-210ENST00000590541 NBPF14Q5TI25 921 aa25.48■■□□□ 1.67
RETREG3-210ENST00000590541 ACEP12821 1306 aa25.47■■□□□ 1.67
RETREG3-210ENST00000590541 LMO7Q8WWI1 1683 aa25.47■■□□□ 1.67
RETREG3-210ENST00000590541 TCP11L2Q8N4U5 519 aa25.46■■□□□ 1.67
RETREG3-210ENST00000590541 CDK19Q9BWU1 502 aa25.46■■□□□ 1.67
RETREG3-210ENST00000590541 TOPAZ1Q8N9V7 1692 aa25.45■■□□□ 1.67
RETREG3-210ENST00000590541 RAB3GAP2Q9H2M9 1393 aa25.45■■□□□ 1.67
RETREG3-210ENST00000590541 STAC3Q96MF2 364 aa25.45■■□□□ 1.66
RETREG3-210ENST00000590541 CPDO75976 1380 aa25.44■■□□□ 1.66
RETREG3-210ENST00000590541 USP19O94966 1318 aa25.42■■□□□ 1.66
RETREG3-210ENST00000590541 PLEKHG3A1L390 1219 aa25.42■■□□□ 1.66
RETREG3-210ENST00000590541 SPON1Q9HCB6 807 aa25.42■■□□□ 1.66
RETREG3-210ENST00000590541 THRAP3Q9Y2W1 955 aaKnown RBP25.42■■□□□ 1.66
RETREG3-210ENST00000590541 CCDC61Q9Y6R9 512 aa25.42■■□□□ 1.66
RETREG3-210ENST00000590541 ABTB2Q8N961 1025 aa25.41■■□□□ 1.66
RETREG3-210ENST00000590541 PARP4Q9UKK3 1724 aaKnown RBP25.4■■□□□ 1.66
RETREG3-210ENST00000590541 KCNQ2O43526 872 aa25.4■■□□□ 1.66
RETREG3-210ENST00000590541 PPP1R1BQ9UD71 204 aaPredicted RBP25.39■■□□□ 1.66
RETREG3-210ENST00000590541 COL5A2P05997 1499 aaPredicted RBP25.37■■□□□ 1.65
RETREG3-210ENST00000590541 NINLQ9Y2I6 1382 aa25.36■■□□□ 1.65
RETREG3-210ENST00000590541 GCP02774 474 aa25.36■■□□□ 1.65
RETREG3-210ENST00000590541 PEAK1Q9H792 1746 aa25.36■■□□□ 1.65
RETREG3-210ENST00000590541 C11orf95C9JLR9 678 aaPredicted RBP25.34■■□□□ 1.65
RETREG3-210ENST00000590541 NLRP13Q86W25 1043 aa25.34■■□□□ 1.65
RETREG3-210ENST00000590541 OVOS2A0A0G2JMS6 1433 aa25.33■■□□□ 1.65
RETREG3-210ENST00000590541 OVOS2A0A0J9YW53 1432 aa25.33■■□□□ 1.65
RETREG3-210ENST00000590541 CRB1P82279 1406 aa25.33■■□□□ 1.65
RETREG3-210ENST00000590541 OVOS2Q6IE36 1432 aa25.33■■□□□ 1.65
RETREG3-210ENST00000590541 RGPD3A6NKT7 1758 aaPredicted RBP25.32■■□□□ 1.64
RETREG3-210ENST00000590541 RGPD4Q7Z3J3 1758 aa25.32■■□□□ 1.64
RETREG3-210ENST00000590541 PLSCR1O15162 318 aa25.31■■□□□ 1.64
RETREG3-210ENST00000590541 ANO8Q9HCE9 1232 aaPredicted RBP25.31■■□□□ 1.64
RETREG3-210ENST00000590541 SBF2Q86WG5 1849 aa25.3■■□□□ 1.64
RETREG3-210ENST00000590541 LRRC37A3O60309 1634 aa25.3■■□□□ 1.64
RETREG3-210ENST00000590541 DCAF8L1A6NGE4 600 aa25.29■■□□□ 1.64
RETREG3-210ENST00000590541 PPIP5K1Q6PFW1 1433 aa25.29■■□□□ 1.64
RETREG3-210ENST00000590541 CASZ1Q86V15 1759 aa25.28■■□□□ 1.64
RETREG3-210ENST00000590541 PTF1AQ7RTS3 328 aa25.28■■□□□ 1.64
RETREG3-210ENST00000590541 DDB1Q16531 1140 aa25.26■■□□□ 1.63
RETREG3-210ENST00000590541 AATKQ6ZMQ8 1374 aa25.26■■□□□ 1.63
RETREG3-210ENST00000590541 KIAA1210Q9ULL0 1709 aa25.26■■□□□ 1.63
RETREG3-210ENST00000590541 ZBTB7CA1YPR0 619 aa25.25■■□□□ 1.63
RETREG3-210ENST00000590541 SRPK2P78362 688 aaKnown RBP25.25■■□□□ 1.63
RETREG3-210ENST00000590541 BCL11BQ9C0K0 894 aaPredicted RBP25.25■■□□□ 1.63
RETREG3-210ENST00000590541 PDGFDQ9GZP0 370 aaPredicted RBP25.25■■□□□ 1.63
RETREG3-210ENST00000590541 BRD4O60885 1362 aaPredicted RBP25.25■■□□□ 1.63
RETREG3-210ENST00000590541 SLIT3O75094 1523 aa25.24■■□□□ 1.63
RETREG3-210ENST00000590541 NBPF1Q3BBV0 1214 aa25.24■■□□□ 1.63
RETREG3-210ENST00000590541 PROM2Q8N271 834 aa25.24■■□□□ 1.63
RETREG3-210ENST00000590541 CABP2Q9NPB3 220 aa25.24■■□□□ 1.63
RETREG3-210ENST00000590541 USP6P35125 1406 aa25.21■■□□□ 1.63
RETREG3-210ENST00000590541 COL18A1P39060 1754 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms