RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-208ENST00000590470 PIK3C2AO00443 1686 aa12.77□□□□□ -0.36
ZNF397-208ENST00000590470 FYB1O15117 783 aa12.77□□□□□ -0.37
ZNF397-208ENST00000590470 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.37
ZNF397-208ENST00000590470 PSME1Q06323 249 aa12.77□□□□□ -0.37
ZNF397-208ENST00000590470 SLAIN2Q9P270 581 aa12.77□□□□□ -0.37
ZNF397-208ENST00000590470 TTC21BQ7Z4L5 1316 aa12.77□□□□□ -0.37
ZNF397-208ENST00000590470 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
ZNF397-208ENST00000590470 BRINP3Q76B58 766 aa12.76□□□□□ -0.37
ZNF397-208ENST00000590470 CGNL1Q0VF96 1302 aa12.76□□□□□ -0.37
ZNF397-208ENST00000590470 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
ZNF397-208ENST00000590470 MARF1Q9Y4F3 1742 aaKnown RBP12.76□□□□□ -0.37
ZNF397-208ENST00000590470 SSH2Q76I76 1423 aa12.75□□□□□ -0.37
ZNF397-208ENST00000590470 KRT28Q7Z3Y7 464 aa12.75□□□□□ -0.37
ZNF397-208ENST00000590470 MORC1Q86VD1 984 aa12.75□□□□□ -0.37
ZNF397-208ENST00000590470 PARD3Q8TEW0 1356 aa12.75□□□□□ -0.37
ZNF397-208ENST00000590470 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
ZNF397-208ENST00000590470 ROBO1Q9Y6N7 1651 aa12.75□□□□□ -0.37
ZNF397-208ENST00000590470 SOX12O15370 315 aa12.74□□□□□ -0.37
ZNF397-208ENST00000590470 PIP4K2BP78356 416 aa12.74□□□□□ -0.37
ZNF397-208ENST00000590470 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
ZNF397-208ENST00000590470 PPP2R1AP30153 589 aa12.73□□□□□ -0.37
ZNF397-208ENST00000590470 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
ZNF397-208ENST00000590470 MYBBP1AQ9BQG0 1328 aaKnown RBP12.72□□□□□ -0.37
ZNF397-208ENST00000590470 RALBP1Q15311 655 aa12.72□□□□□ -0.37
ZNF397-208ENST00000590470 MAP2P11137 1827 aaKnown RBP12.72□□□□□ -0.37
ZNF397-208ENST00000590470 NHSL1Q5SYE7 1610 aa12.71□□□□□ -0.37
ZNF397-208ENST00000590470 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
ZNF397-208ENST00000590470 NPC1L1Q9UHC9 1359 aa12.7□□□□□ -0.38
ZNF397-208ENST00000590470 UBAP1LF5GYI3 381 aa12.7□□□□□ -0.38
ZNF397-208ENST00000590470 ABTB2Q8N961 1025 aa12.7□□□□□ -0.38
ZNF397-208ENST00000590470 CERKQ8TCT0 537 aa12.7□□□□□ -0.38
ZNF397-208ENST00000590470 MRS2Q9HD23 443 aa12.7□□□□□ -0.38
ZNF397-208ENST00000590470 PXDNQ92626 1479 aa12.7□□□□□ -0.38
ZNF397-208ENST00000590470 SENP3-EIF4A1A0A087X0R7 540 aa12.69□□□□□ -0.38
ZNF397-208ENST00000590470 NLRP6P59044 892 aa12.69□□□□□ -0.38
ZNF397-208ENST00000590470 COG3Q96JB2 828 aa12.69□□□□□ -0.38
ZNF397-208ENST00000590470 OVOS2A0A0J9YW53 1432 aa12.69□□□□□ -0.38
ZNF397-208ENST00000590470 OVOS2Q6IE36 1432 aa12.69□□□□□ -0.38
ZNF397-208ENST00000590470 NSD2O96028 1365 aa12.69□□□□□ -0.38
ZNF397-208ENST00000590470 TTC21AQ8NDW8 1320 aa12.68□□□□□ -0.38
ZNF397-208ENST00000590470 RRS1Q15050 365 aaKnown RBP12.68□□□□□ -0.38
ZNF397-208ENST00000590470 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
ZNF397-208ENST00000590470 PHLPP1O60346 1717 aa12.68□□□□□ -0.38
ZNF397-208ENST00000590470 NPHP3Q7Z494 1330 aa12.67□□□□□ -0.38
ZNF397-208ENST00000590470 ZBTB7CA1YPR0 619 aa12.67□□□□□ -0.38
ZNF397-208ENST00000590470 CCER2I3L3R5 266 aa12.67□□□□□ -0.38
ZNF397-208ENST00000590470 PPM1GO15355 546 aaPredicted RBP12.67□□□□□ -0.38
ZNF397-208ENST00000590470 CABLES1Q8TDN4 633 aa12.67□□□□□ -0.38
ZNF397-208ENST00000590470 PEAK1Q9H792 1746 aa12.67□□□□□ -0.38
ZNF397-208ENST00000590470 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
ZNF397-208ENST00000590470 LTN1O94822 1766 aa12.66□□□□□ -0.38
ZNF397-208ENST00000590470 MED1Q15648 1581 aaPredicted RBP12.66□□□□□ -0.38
ZNF397-208ENST00000590470 MTHFSP49914 203 aa12.66□□□□□ -0.38
ZNF397-208ENST00000590470 FAM9BQ8IZU0 186 aa12.66□□□□□ -0.38
ZNF397-208ENST00000590470 EMILIN1Q9Y6C2 1016 aa12.66□□□□□ -0.38
ZNF397-208ENST00000590470 TOM1O60784 492 aa12.65□□□□□ -0.38
ZNF397-208ENST00000590470 NLRP13Q86W25 1043 aa12.65□□□□□ -0.38
ZNF397-208ENST00000590470 PHRF1Q9P1Y6 1649 aaKnown RBP12.65□□□□□ -0.38
ZNF397-208ENST00000590470 CRYBG1Q9Y4K1 1723 aa12.65□□□□□ -0.38
ZNF397-208ENST00000590470 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
ZNF397-208ENST00000590470 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
ZNF397-208ENST00000590470 SOS2Q07890 1332 aaPredicted RBP12.63□□□□□ -0.39
ZNF397-208ENST00000590470 SPATA31A3Q5VYP0 1347 aa12.63□□□□□ -0.39
ZNF397-208ENST00000590470 TNS3Q68CZ2 1445 aa12.63□□□□□ -0.39
ZNF397-208ENST00000590470 POLKQ9UBT6 870 aa12.63□□□□□ -0.39
ZNF397-208ENST00000590470 SBNO1A3KN83 1393 aa12.63□□□□□ -0.39
ZNF397-208ENST00000590470 BRD4O60885 1362 aaPredicted RBP12.63□□□□□ -0.39
ZNF397-208ENST00000590470 AHDC1Q5TGY3 1603 aaPredicted RBP12.62□□□□□ -0.39
ZNF397-208ENST00000590470 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
ZNF397-208ENST00000590470 RGPD5Q99666 1765 aa12.62□□□□□ -0.39
ZNF397-208ENST00000590470 ZC3H6P61129 1189 aaKnown RBP12.61□□□□□ -0.39
ZNF397-208ENST00000590470 COL16A1Q07092 1604 aaPredicted RBP12.61□□□□□ -0.39
ZNF397-208ENST00000590470 SLIT3O75094 1523 aa12.61□□□□□ -0.39
ZNF397-208ENST00000590470 NFAT5O94916 1531 aa12.61□□□□□ -0.39
ZNF397-208ENST00000590470 MAP3K19Q56UN5 1328 aa12.61□□□□□ -0.39
ZNF397-208ENST00000590470 IQSEC2Q5JU85 1478 aa12.6□□□□□ -0.39
ZNF397-208ENST00000590470 PNISRQ8TF01 805 aaKnown RBP12.6□□□□□ -0.39
ZNF397-208ENST00000590470 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
ZNF397-208ENST00000590470 GCP02774 474 aa12.59□□□□□ -0.39
ZNF397-208ENST00000590470 USP19O94966 1318 aa12.59□□□□□ -0.39
ZNF397-208ENST00000590470 RGPD2P0DJD1 1756 aa12.58□□□□□ -0.39
ZNF397-208ENST00000590470 AATKQ6ZMQ8 1374 aa12.58□□□□□ -0.4
ZNF397-208ENST00000590470 ARHGEF10O15013 1369 aa12.57□□□□□ -0.4
ZNF397-208ENST00000590470 AMPHP49418 695 aa12.57□□□□□ -0.4
ZNF397-208ENST00000590470 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
ZNF397-208ENST00000590470 LTV1Q96GA3 475 aaPredicted RBP12.57□□□□□ -0.4
ZNF397-208ENST00000590470 CFAP53Q96M91 514 aa12.57□□□□□ -0.4
ZNF397-208ENST00000590470 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
ZNF397-208ENST00000590470 U2SURPO15042 1029 aaKnown RBP12.56□□□□□ -0.4
ZNF397-208ENST00000590470 CHRNA2Q15822 529 aa12.56□□□□□ -0.4
ZNF397-208ENST00000590470 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
ZNF397-208ENST00000590470 ADAMTS8Q9UP79 889 aa12.56□□□□□ -0.4
ZNF397-208ENST00000590470 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
ZNF397-208ENST00000590470 CDK12Q9NYV4 1490 aaPredicted RBP12.55□□□□□ -0.4
ZNF397-208ENST00000590470 DIAPH1O60610 1272 aaKnown RBP12.55□□□□□ -0.4
ZNF397-208ENST00000590470 HOXC9P31274 260 aa12.55□□□□□ -0.4
ZNF397-208ENST00000590470 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
ZNF397-208ENST00000590470 WDR43Q15061 677 aaKnown RBP eCLIP12.55□□□□□ -0.4
ZNF397-208ENST00000590470 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
ZNF397-208ENST00000590470 COL18A1P39060 1754 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms