RNA–Protein interactions for RNA: ENST00000590013.2

PIK3C3-212, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 5

Gene PIK3C3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-212ENST00000590013 NESP48681 1621 aa9.55□□□□□ -0.88
PIK3C3-212ENST00000590013 ERCC6Q03468 1493 aa9.54□□□□□ -0.88
PIK3C3-212ENST00000590013 PLEKHG3A1L390 1219 aa9.54□□□□□ -0.88
PIK3C3-212ENST00000590013 SYMPKQ92797 1274 aaKnown RBP9.54□□□□□ -0.88
PIK3C3-212ENST00000590013 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
PIK3C3-212ENST00000590013 SPIRE2Q8WWL2 714 aa9.53□□□□□ -0.88
PIK3C3-212ENST00000590013 PCDHGC3Q9UN70 934 aa9.53□□□□□ -0.88
PIK3C3-212ENST00000590013 CADPSQ9ULU8 1353 aa9.52□□□□□ -0.88
PIK3C3-212ENST00000590013 SPDYE5A6NIY4 337 aa9.52□□□□□ -0.89
PIK3C3-212ENST00000590013 PTPRNQ16849 979 aa9.52□□□□□ -0.89
PIK3C3-212ENST00000590013 LAMC3Q9Y6N6 1575 aa9.51□□□□□ -0.89
PIK3C3-212ENST00000590013 C6orf229H3BNL8 230 aa9.51□□□□□ -0.89
PIK3C3-212ENST00000590013 CCNYL3P0C7X3 344 aa9.51□□□□□ -0.89
PIK3C3-212ENST00000590013 GJA5P36382 358 aa9.51□□□□□ -0.89
PIK3C3-212ENST00000590013 HPS1Q92902 700 aa9.51□□□□□ -0.89
PIK3C3-212ENST00000590013 KIFC2Q96AC6 838 aa9.51□□□□□ -0.89
PIK3C3-212ENST00000590013 TRIM47Q96LD4 638 aa9.51□□□□□ -0.89
PIK3C3-212ENST00000590013 SIAH2O43255 324 aa9.5□□□□□ -0.89
PIK3C3-212ENST00000590013 WFS1O76024 890 aa9.5□□□□□ -0.89
PIK3C3-212ENST00000590013 DIXDC1Q155Q3 683 aa9.5□□□□□ -0.89
PIK3C3-212ENST00000590013 DESI1Q6ICB0 168 aa9.5□□□□□ -0.89
PIK3C3-212ENST00000590013 PTCRAQ6ISU1 281 aaPredicted RBP9.49□□□□□ -0.89
PIK3C3-212ENST00000590013 PDS5BQ9NTI5 1447 aa9.48□□□□□ -0.89
PIK3C3-212ENST00000590013 EHBP1Q8NDI1 1231 aa9.48□□□□□ -0.89
PIK3C3-212ENST00000590013 BEGAINQ9BUH8 593 aa9.48□□□□□ -0.89
PIK3C3-212ENST00000590013 EVA1BQ9NVM1 165 aa9.48□□□□□ -0.89
PIK3C3-212ENST00000590013 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
PIK3C3-212ENST00000590013 MOXD2PA6NHM9 499 aa9.47□□□□□ -0.89
PIK3C3-212ENST00000590013 ALDH1A1P00352 501 aa9.47□□□□□ -0.89
PIK3C3-212ENST00000590013 NFX1Q12986 1120 aaKnown RBP9.47□□□□□ -0.89
PIK3C3-212ENST00000590013 SH3BP2P78314 561 aa9.46□□□□□ -0.9
PIK3C3-212ENST00000590013 MTMR2Q13614 643 aa9.46□□□□□ -0.9
PIK3C3-212ENST00000590013 CFTRP13569 1480 aa9.46□□□□□ -0.9
PIK3C3-212ENST00000590013 WIPF1O43516 503 aa9.45□□□□□ -0.9
PIK3C3-212ENST00000590013 NDUFV2P19404 249 aa9.45□□□□□ -0.9
PIK3C3-212ENST00000590013 KCNH2Q12809 1159 aa9.45□□□□□ -0.9
PIK3C3-212ENST00000590013 MPNDQ8N594 471 aa9.45□□□□□ -0.9
PIK3C3-212ENST00000590013 PRR7Q8TB68 274 aa9.45□□□□□ -0.9
PIK3C3-212ENST00000590013 UNC93B1Q9H1C4 597 aa9.45□□□□□ -0.9
PIK3C3-212ENST00000590013 ATP1B4Q9UN42 357 aaPredicted RBP9.45□□□□□ -0.9
PIK3C3-212ENST00000590013 SNRPBP14678 240 aaKnown RBP9.44□□□□□ -0.9
PIK3C3-212ENST00000590013 FANCD2Q9BXW9 1451 aa9.44□□□□□ -0.9
PIK3C3-212ENST00000590013 KIF21AQ7Z4S6 1674 aa9.43□□□□□ -0.9
PIK3C3-212ENST00000590013 CEP164Q9UPV0 1460 aa9.43□□□□□ -0.9
PIK3C3-212ENST00000590013 C14orf37Q86TY3 774 aa9.43□□□□□ -0.9
PIK3C3-212ENST00000590013 WASF2Q9Y6W5 498 aa9.43□□□□□ -0.9
PIK3C3-212ENST00000590013 TERTO14746 1132 aaKnown RBP9.42□□□□□ -0.9
PIK3C3-212ENST00000590013 VARSP26640 1264 aaKnown RBP9.41□□□□□ -0.9
PIK3C3-212ENST00000590013 RSBN1LQ6PCB5 846 aaPredicted RBP9.41□□□□□ -0.9
PIK3C3-212ENST00000590013 PCMTD1Q96MG8 357 aaPredicted RBP9.41□□□□□ -0.9
PIK3C3-212ENST00000590013 TBC1D2Q9BYX2 928 aa9.41□□□□□ -0.9
PIK3C3-212ENST00000590013 POLR3EQ9NVU0 708 aa9.41□□□□□ -0.9
PIK3C3-212ENST00000590013 PRDM2Q13029 1718 aa9.4□□□□□ -0.9
PIK3C3-212ENST00000590013 INSM1Q01101 510 aaPredicted RBP9.4□□□□□ -0.9
PIK3C3-212ENST00000590013 ZNF511Q8NB15 262 aa9.4□□□□□ -0.9
PIK3C3-212ENST00000590013 RSPH6AQ9H0K4 717 aa9.4□□□□□ -0.9
PIK3C3-212ENST00000590013 SPTLC1O15269 473 aa9.39□□□□□ -0.91
PIK3C3-212ENST00000590013 SH3D19Q5HYK7 790 aa9.39□□□□□ -0.91
PIK3C3-212ENST00000590013 LYPD8Q6UX82 237 aa9.39□□□□□ -0.91
PIK3C3-212ENST00000590013 GOPCQ9HD26 462 aa9.39□□□□□ -0.91
PIK3C3-212ENST00000590013 CAPN5O15484 640 aaPredicted RBP9.38□□□□□ -0.91
PIK3C3-212ENST00000590013 PRPF38BQ5VTL8 546 aaKnown RBP9.38□□□□□ -0.91
PIK3C3-212ENST00000590013 NPAS3Q8IXF0 933 aa9.38□□□□□ -0.91
PIK3C3-212ENST00000590013 BAP1Q92560 729 aa9.38□□□□□ -0.91
PIK3C3-212ENST00000590013 STK17AQ9UEE5 414 aa9.38□□□□□ -0.91
PIK3C3-212ENST00000590013 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
PIK3C3-212ENST00000590013 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
PIK3C3-212ENST00000590013 ZBTB3Q9H5J0 574 aa9.37□□□□□ -0.91
PIK3C3-212ENST00000590013 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
PIK3C3-212ENST00000590013 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
PIK3C3-212ENST00000590013 MYSM1Q5VVJ2 828 aa9.36□□□□□ -0.91
PIK3C3-212ENST00000590013 TRIM46Q7Z4K8 759 aa9.36□□□□□ -0.91
PIK3C3-212ENST00000590013 ERICH6Q7L0X2 663 aa9.35□□□□□ -0.91
PIK3C3-212ENST00000590013 HRCP23327 699 aa9.34□□□□□ -0.91
PIK3C3-212ENST00000590013 TUSC1Q2TAM9 212 aa9.34□□□□□ -0.91
PIK3C3-212ENST00000590013 SLC16A10Q8TF71 515 aa9.34□□□□□ -0.91
PIK3C3-212ENST00000590013 NXF1Q9UBU9 619 aaKnown RBP9.34□□□□□ -0.91
PIK3C3-212ENST00000590013 PCDHB15Q9Y5E8 787 aa9.34□□□□□ -0.91
PIK3C3-212ENST00000590013 CFAP99D6REC4 459 aa9.33□□□□□ -0.92
PIK3C3-212ENST00000590013 F12P00748 615 aaPredicted RBP9.33□□□□□ -0.92
PIK3C3-212ENST00000590013 CTHP32929 405 aa9.33□□□□□ -0.92
PIK3C3-212ENST00000590013 RIC3Q7Z5B4 369 aa9.33□□□□□ -0.92
PIK3C3-212ENST00000590013 FAM174AQ8TBP5 190 aa9.33□□□□□ -0.92
PIK3C3-212ENST00000590013 TLL2Q9Y6L7 1015 aa9.33□□□□□ -0.92
PIK3C3-212ENST00000590013 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
PIK3C3-212ENST00000590013 CDK15Q96Q40 435 aa9.32□□□□□ -0.92
PIK3C3-212ENST00000590013 ADH1CP00326 375 aa9.31□□□□□ -0.92
PIK3C3-212ENST00000590013 BMP1P13497 986 aa9.31□□□□□ -0.92
PIK3C3-212ENST00000590013 CLK2P49760 499 aaKnown RBP9.31□□□□□ -0.92
PIK3C3-212ENST00000590013 NNTQ13423 1086 aa9.31□□□□□ -0.92
PIK3C3-212ENST00000590013 THOC2Q8NI27 1593 aaKnown RBP9.31□□□□□ -0.92
PIK3C3-212ENST00000590013 ABCC8Q09428 1581 aa9.3□□□□□ -0.92
PIK3C3-212ENST00000590013 CSPP1Q1MSJ5 1256 aa9.3□□□□□ -0.92
PIK3C3-212ENST00000590013 LIMD1Q9UGP4 676 aa9.3□□□□□ -0.92
PIK3C3-212ENST00000590013 URB2Q14146 1524 aaKnown RBP9.3□□□□□ -0.92
PIK3C3-212ENST00000590013 TOPBP1Q92547 1522 aa9.28□□□□□ -0.92
PIK3C3-212ENST00000590013 TIMP2P16035 220 aa9.28□□□□□ -0.92
PIK3C3-212ENST00000590013 ARMC2Q8NEN0 867 aa9.28□□□□□ -0.92
PIK3C3-212ENST00000590013 ZFP42Q96MM3 310 aa9.28□□□□□ -0.92
PIK3C3-212ENST00000590013 KLF16Q9BXK1 252 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms