RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 ACEP12821 1306 aa14.08□□□□□ -0.16
PTPN2-208ENST00000589216 NWD2Q9ULI1 1742 aa14.07□□□□□ -0.16
PTPN2-208ENST00000589216 BCL9LQ86UU0 1499 aa14.07□□□□□ -0.16
PTPN2-208ENST00000589216 LMOD2Q6P5Q4 547 aa14.07□□□□□ -0.16
PTPN2-208ENST00000589216 CCDC61Q9Y6R9 512 aa14.07□□□□□ -0.16
PTPN2-208ENST00000589216 CLSPNQ9HAW4 1339 aa14.07□□□□□ -0.16
PTPN2-208ENST00000589216 SLIT2O94813 1529 aa14.06□□□□□ -0.16
PTPN2-208ENST00000589216 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
PTPN2-208ENST00000589216 RGS12O14924 1447 aa14.06□□□□□ -0.16
PTPN2-208ENST00000589216 USP6P35125 1406 aa14.06□□□□□ -0.16
PTPN2-208ENST00000589216 GLI3P10071 1580 aa14.05□□□□□ -0.16
PTPN2-208ENST00000589216 COL14A1Q05707 1796 aaKnown RBP14.05□□□□□ -0.16
PTPN2-208ENST00000589216 PLEKHG3A1L390 1219 aa14.05□□□□□ -0.16
PTPN2-208ENST00000589216 NGLY1Q96IV0 654 aa14.05□□□□□ -0.16
PTPN2-208ENST00000589216 EVC2Q86UK5 1308 aa14.05□□□□□ -0.16
PTPN2-208ENST00000589216 ATRNO75882 1429 aa14.05□□□□□ -0.16
PTPN2-208ENST00000589216 CD163L1Q9NR16 1453 aa14.04□□□□□ -0.16
PTPN2-208ENST00000589216 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
PTPN2-208ENST00000589216 FNBP4Q8N3X1 1017 aaPredicted RBP14.03□□□□□ -0.16
PTPN2-208ENST00000589216 USP47Q96K76 1375 aa14.03□□□□□ -0.16
PTPN2-208ENST00000589216 SSH2Q76I76 1423 aa14.03□□□□□ -0.16
PTPN2-208ENST00000589216 CDK12Q9NYV4 1490 aaPredicted RBP14.03□□□□□ -0.16
PTPN2-208ENST00000589216 CCER1Q8TC90 406 aaPredicted RBP14.02□□□□□ -0.17
PTPN2-208ENST00000589216 TESK2Q96S53 571 aa14.02□□□□□ -0.17
PTPN2-208ENST00000589216 CABP1Q9NZU7 370 aa14.02□□□□□ -0.17
PTPN2-208ENST00000589216 USP21Q9UK80 565 aa14.02□□□□□ -0.17
PTPN2-208ENST00000589216 MYOM1P52179 1685 aa14.01□□□□□ -0.17
PTPN2-208ENST00000589216 ATAD2Q6PL18 1390 aa14.01□□□□□ -0.17
PTPN2-208ENST00000589216 NUTM2GQ5VZR2 741 aa14.01□□□□□ -0.17
PTPN2-208ENST00000589216 USP54Q70EL1 1684 aa14.01□□□□□ -0.17
PTPN2-208ENST00000589216 LMO7Q8WWI1 1683 aa14.01□□□□□ -0.17
PTPN2-208ENST00000589216 SLIT3O75094 1523 aa14□□□□□ -0.17
PTPN2-208ENST00000589216 CPSF1Q10570 1443 aaKnown RBP14□□□□□ -0.17
PTPN2-208ENST00000589216 USP19O94966 1318 aa13.99□□□□□ -0.17
PTPN2-208ENST00000589216 ST20-MTHFSA0A0A6YYL1 179 aa13.99□□□□□ -0.17
PTPN2-208ENST00000589216 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
PTPN2-208ENST00000589216 QTRT2Q9H974 415 aaKnown RBP13.99□□□□□ -0.17
PTPN2-208ENST00000589216 RXRBP28702 533 aa13.98□□□□□ -0.17
PTPN2-208ENST00000589216 BRWD3Q6RI45 1802 aa13.98□□□□□ -0.17
PTPN2-208ENST00000589216 KIAA0232Q92628 1395 aa13.97□□□□□ -0.17
PTPN2-208ENST00000589216 FAM83GA6ND36 823 aa13.97□□□□□ -0.17
PTPN2-208ENST00000589216 RBM6P78332 1123 aaKnown RBP13.96□□□□□ -0.17
PTPN2-208ENST00000589216 TRPC5Q9UL62 973 aaPredicted RBP13.96□□□□□ -0.17
PTPN2-208ENST00000589216 TIMELESSQ9UNS1 1208 aa13.96□□□□□ -0.17
PTPN2-208ENST00000589216 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.18
PTPN2-208ENST00000589216 NFAT5O94916 1531 aa13.95□□□□□ -0.18
PTPN2-208ENST00000589216 UNC5CLQ8IV45 518 aa13.95□□□□□ -0.18
PTPN2-208ENST00000589216 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
PTPN2-208ENST00000589216 A0A1W2PP64 1363 aa13.95□□□□□ -0.18
PTPN2-208ENST00000589216 KTN1Q86UP2 1357 aaKnown RBP13.95□□□□□ -0.18
PTPN2-208ENST00000589216 COL18A1P39060 1754 aa13.94□□□□□ -0.18
PTPN2-208ENST00000589216 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
PTPN2-208ENST00000589216 RGPD5Q99666 1765 aa13.94□□□□□ -0.18
PTPN2-208ENST00000589216 CHRNA2Q15822 529 aa13.93□□□□□ -0.18
PTPN2-208ENST00000589216 PRDM11Q9NQV5 511 aa13.93□□□□□ -0.18
PTPN2-208ENST00000589216 THSD7AQ9UPZ6 1657 aa13.93□□□□□ -0.18
PTPN2-208ENST00000589216 EP400Q96L91 3159 aa13.93□□□□□ -0.18
PTPN2-208ENST00000589216 TTC21BQ7Z4L5 1316 aa13.92□□□□□ -0.18
PTPN2-208ENST00000589216 LTN1O94822 1766 aa13.92□□□□□ -0.18
PTPN2-208ENST00000589216 ZC3H6P61129 1189 aaKnown RBP13.92□□□□□ -0.18
PTPN2-208ENST00000589216 SLC12A5Q9H2X9 1139 aa13.92□□□□□ -0.18
PTPN2-208ENST00000589216 BTG4Q9NY30 223 aa13.92□□□□□ -0.18
PTPN2-208ENST00000589216 CPDO75976 1380 aa13.92□□□□□ -0.18
PTPN2-208ENST00000589216 GJD4Q96KN9 370 aaPredicted RBP13.91□□□□□ -0.18
PTPN2-208ENST00000589216 EDC4Q6P2E9 1401 aaKnown RBP13.9□□□□□ -0.18
PTPN2-208ENST00000589216 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
PTPN2-208ENST00000589216 WNK3Q9BYP7 1800 aa13.9□□□□□ -0.18
PTPN2-208ENST00000589216 VPS72Q15906 364 aa13.9□□□□□ -0.18
PTPN2-208ENST00000589216 TMC1Q8TDI8 760 aa13.9□□□□□ -0.18
PTPN2-208ENST00000589216 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
PTPN2-208ENST00000589216 COL5A2P05997 1499 aaPredicted RBP13.89□□□□□ -0.19
PTPN2-208ENST00000589216 NLRP6P59044 892 aa13.89□□□□□ -0.19
PTPN2-208ENST00000589216 NLRP13Q86W25 1043 aa13.89□□□□□ -0.19
PTPN2-208ENST00000589216 OVOS2A0A0J9YW53 1432 aa13.89□□□□□ -0.19
PTPN2-208ENST00000589216 OVOS2Q6IE36 1432 aa13.89□□□□□ -0.19
PTPN2-208ENST00000589216 TTC21AQ8NDW8 1320 aa13.89□□□□□ -0.19
PTPN2-208ENST00000589216 NINLQ9Y2I6 1382 aa13.88□□□□□ -0.19
PTPN2-208ENST00000589216 GCP02774 474 aa13.88□□□□□ -0.19
PTPN2-208ENST00000589216 NME9Q86XW9 330 aa13.88□□□□□ -0.19
PTPN2-208ENST00000589216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■□□□□ 10.9
PTPN2-208ENST00000589216 PUS7Q96PZ0 661 aaKnown RBP13.88□□□□□ -0.19
PTPN2-208ENST00000589216 ANKRD36BQ8N2N9 1353 aa13.87□□□□□ -0.19
PTPN2-208ENST00000589216 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
PTPN2-208ENST00000589216 USP31Q70CQ4 1352 aa13.86□□□□□ -0.19
PTPN2-208ENST00000589216 TMF1P82094 1093 aa13.86□□□□□ -0.19
PTPN2-208ENST00000589216 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
PTPN2-208ENST00000589216 SPATA31A5Q5VU36 1347 aa13.86□□□□□ -0.19
PTPN2-208ENST00000589216 SPATA31A7Q8IWB4 1347 aa13.86□□□□□ -0.19
PTPN2-208ENST00000589216 SOX12O15370 315 aa13.85□□□□□ -0.19
PTPN2-208ENST00000589216 HDGFL2Q7Z4V5 671 aaPredicted RBP13.85□□□□□ -0.19
PTPN2-208ENST00000589216 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTPN2-208ENST00000589216 STRN4Q9NRL3 753 aa13.85□□□□□ -0.19
PTPN2-208ENST00000589216 ABCC6O95255 1503 aa13.85□□□□□ -0.19
PTPN2-208ENST00000589216 LRRC37A3O60309 1634 aa13.84□□□□□ -0.19
PTPN2-208ENST00000589216 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
PTPN2-208ENST00000589216 HSPA5P11021 654 aaKnown RBP13.84□□□□□ -0.19
PTPN2-208ENST00000589216 TERF2IPQ9NYB0 399 aa13.84□□□□□ -0.19
PTPN2-208ENST00000589216 AATKQ6ZMQ8 1374 aa13.83□□□□□ -0.19
PTPN2-208ENST00000589216 FAM98CQ17RN3 349 aaKnown RBP13.83□□□□□ -0.2
PTPN2-208ENST00000589216 SEPT12Q8IYM1 358 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms