RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
KDM4B-208ENST00000589104 PTCH1Q13635 1447 aa17.38■□□□□ 0.37
KDM4B-208ENST00000589104 PCDHB15Q9Y5E8 787 aa17.37■□□□□ 0.37
KDM4B-208ENST00000589104 FMN2Q9NZ56 1722 aa17.37■□□□□ 0.37
KDM4B-208ENST00000589104 LAS1LQ9Y4W2 734 aaKnown RBP17.37■□□□□ 0.37
KDM4B-208ENST00000589104 TECPR2O15040 1411 aa17.37■□□□□ 0.37
KDM4B-208ENST00000589104 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
KDM4B-208ENST00000589104 TBC1D32Q96NH3 1257 aa17.36■□□□□ 0.37
KDM4B-208ENST00000589104 NEFMP07197 916 aa17.36■□□□□ 0.37
KDM4B-208ENST00000589104 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
KDM4B-208ENST00000589104 GSE1Q14687 1217 aa17.35■□□□□ 0.37
KDM4B-208ENST00000589104 TRIM35Q9UPQ4 493 aa17.35■□□□□ 0.37
KDM4B-208ENST00000589104 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
KDM4B-208ENST00000589104 HDAC1Q13547 482 aaPredicted RBP17.34■□□□□ 0.37
KDM4B-208ENST00000589104 PEAK1Q9H792 1746 aa17.34■□□□□ 0.37
KDM4B-208ENST00000589104 CDK12Q9NYV4 1490 aaPredicted RBP17.34■□□□□ 0.37
KDM4B-208ENST00000589104 ZNF692Q9BU19 519 aaPredicted RBP17.33■□□□□ 0.37
KDM4B-208ENST00000589104 UBR1Q8IWV7 1749 aa17.32■□□□□ 0.36
KDM4B-208ENST00000589104 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
KDM4B-208ENST00000589104 A2ML1A8K2U0 1454 aa17.31■□□□□ 0.36
KDM4B-208ENST00000589104 SLC12A5Q9H2X9 1139 aa17.31■□□□□ 0.36
KDM4B-208ENST00000589104 TNNQ9UQP3 1299 aa17.29■□□□□ 0.36
KDM4B-208ENST00000589104 MVPQ14764 893 aaKnown RBP17.28■□□□□ 0.36
KDM4B-208ENST00000589104 ATAD2Q6PL18 1390 aa17.28■□□□□ 0.36
KDM4B-208ENST00000589104 PANK1Q8TE04 598 aa17.28■□□□□ 0.36
KDM4B-208ENST00000589104 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
KDM4B-208ENST00000589104 PMFBP1Q8TBY8 1022 aa17.27■□□□□ 0.36
KDM4B-208ENST00000589104 CRYBG1Q9Y4K1 1723 aa17.27■□□□□ 0.36
KDM4B-208ENST00000589104 FRAT1Q92837 279 aaPredicted RBP17.26■□□□□ 0.35
KDM4B-208ENST00000589104 FAM208AQ9UK61 1670 aaKnown RBP17.26■□□□□ 0.35
KDM4B-208ENST00000589104 AATKQ6ZMQ8 1374 aa17.26■□□□□ 0.35
KDM4B-208ENST00000589104 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
KDM4B-208ENST00000589104 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
KDM4B-208ENST00000589104 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.26■□□□□ 0.35
KDM4B-208ENST00000589104 RGS12O14924 1447 aa17.25■□□□□ 0.35
KDM4B-208ENST00000589104 KIF13AQ9H1H9 1805 aa17.25■□□□□ 0.35
KDM4B-208ENST00000589104 EVC2Q86UK5 1308 aa17.25■□□□□ 0.35
KDM4B-208ENST00000589104 MTHFSP49914 203 aa17.24■□□□□ 0.35
KDM4B-208ENST00000589104 DIP2AQ14689 1571 aa17.24■□□□□ 0.35
KDM4B-208ENST00000589104 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
KDM4B-208ENST00000589104 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
KDM4B-208ENST00000589104 KIF24Q5T7B8 1368 aa17.23■□□□□ 0.35
KDM4B-208ENST00000589104 ZBTB40Q9NUA8 1239 aa17.22■□□□□ 0.35
KDM4B-208ENST00000589104 COG6Q9Y2V7 657 aa17.22■□□□□ 0.35
KDM4B-208ENST00000589104 FRAT2O75474 233 aaPredicted RBP17.22■□□□□ 0.35
KDM4B-208ENST00000589104 ZNF853P0CG23 659 aa17.21■□□□□ 0.35
KDM4B-208ENST00000589104 PDZRN3Q9UPQ7 1066 aa17.21■□□□□ 0.35
KDM4B-208ENST00000589104 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
KDM4B-208ENST00000589104 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
KDM4B-208ENST00000589104 SLC52A1Q9NWF4 448 aa17.2■□□□□ 0.34
KDM4B-208ENST00000589104 FYB1O15117 783 aa17.2■□□□□ 0.34
KDM4B-208ENST00000589104 SLC4A3P48751 1232 aa17.2■□□□□ 0.34
KDM4B-208ENST00000589104 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
KDM4B-208ENST00000589104 TBC1D2Q9BYX2 928 aa17.19■□□□□ 0.34
KDM4B-208ENST00000589104 VGFO15240 615 aaPredicted RBP17.18■□□□□ 0.34
KDM4B-208ENST00000589104 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
KDM4B-208ENST00000589104 TRIM27P14373 513 aa17.18■□□□□ 0.34
KDM4B-208ENST00000589104 KIF2CQ99661 725 aa17.18■□□□□ 0.34
KDM4B-208ENST00000589104 SSH2Q76I76 1423 aa17.18■□□□□ 0.34
KDM4B-208ENST00000589104 MYH16Q9H6N6 1097 aa17.17■□□□□ 0.34
KDM4B-208ENST00000589104 EDC4Q6P2E9 1401 aaKnown RBP17.17■□□□□ 0.34
KDM4B-208ENST00000589104 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
KDM4B-208ENST00000589104 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
KDM4B-208ENST00000589104 RSPH6AQ9H0K4 717 aa17.16■□□□□ 0.34
KDM4B-208ENST00000589104 IDI1Q13907 227 aa17.16■□□□□ 0.34
KDM4B-208ENST00000589104 TMEM132EQ6IEE7 984 aa17.16■□□□□ 0.34
KDM4B-208ENST00000589104 CLEC17AQ6ZS10 378 aa17.16■□□□□ 0.34
KDM4B-208ENST00000589104 ZNF428Q96B54 188 aa17.16■□□□□ 0.34
KDM4B-208ENST00000589104 ABCC4O15439 1325 aa17.16■□□□□ 0.34
KDM4B-208ENST00000589104 SNX21Q969T3 373 aa17.15■□□□□ 0.34
KDM4B-208ENST00000589104 ZMYND15Q9H091 742 aa17.15■□□□□ 0.34
KDM4B-208ENST00000589104 NUCB1Q02818 461 aa17.14■□□□□ 0.33
KDM4B-208ENST00000589104 ATP10DQ9P241 1426 aa17.14■□□□□ 0.33
KDM4B-208ENST00000589104 ARHGAP45Q92619 1136 aa17.13■□□□□ 0.33
KDM4B-208ENST00000589104 KIF16BQ96L93 1317 aa17.13■□□□□ 0.33
KDM4B-208ENST00000589104 SIRT1Q96EB6 747 aa17.13■□□□□ 0.33
KDM4B-208ENST00000589104 ZKSCAN2Q63HK3 967 aa17.12■□□□□ 0.33
KDM4B-208ENST00000589104 OVOS2A0A0J9YW53 1432 aa17.12■□□□□ 0.33
KDM4B-208ENST00000589104 OVOS2Q6IE36 1432 aa17.12■□□□□ 0.33
KDM4B-208ENST00000589104 NWD1Q149M9 1564 aa17.12■□□□□ 0.33
KDM4B-208ENST00000589104 SSH1Q8WYL5 1049 aa17.12■□□□□ 0.33
KDM4B-208ENST00000589104 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
KDM4B-208ENST00000589104 FAM43AQ8N2R8 423 aa17.12■□□□□ 0.33
KDM4B-208ENST00000589104 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
KDM4B-208ENST00000589104 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
KDM4B-208ENST00000589104 RWDD1Q9H446 243 aaPredicted RBP17.11■□□□□ 0.33
KDM4B-208ENST00000589104 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
KDM4B-208ENST00000589104 GLIPR1L2Q4G1C9 344 aa17.11■□□□□ 0.33
KDM4B-208ENST00000589104 DZIP1LQ8IYY4 767 aaKnown RBP17.11■□□□□ 0.33
KDM4B-208ENST00000589104 PIK3C2AO00443 1686 aa17.1■□□□□ 0.33
KDM4B-208ENST00000589104 RGS3P49796 1198 aa17.1■□□□□ 0.33
KDM4B-208ENST00000589104 CAMTA1Q9Y6Y1 1673 aa17.08■□□□□ 0.32
KDM4B-208ENST00000589104 CFAP53Q96M91 514 aa17.08■□□□□ 0.32
KDM4B-208ENST00000589104 RRP7AQ9Y3A4 280 aaKnown RBP17.08■□□□□ 0.32
KDM4B-208ENST00000589104 FCHSD2O94868 740 aa17.08■□□□□ 0.32
KDM4B-208ENST00000589104 ZBTB7BO15156 539 aaPredicted RBP17.07■□□□□ 0.32
KDM4B-208ENST00000589104 DDX19BQ9UMR2 479 aa17.07■□□□□ 0.32
KDM4B-208ENST00000589104 CABP2Q9NPB3 220 aa17.07■□□□□ 0.32
KDM4B-208ENST00000589104 IL17RAQ96F46 866 aa17.06■□□□□ 0.32
KDM4B-208ENST00000589104 ADAMTS7Q9UKP4 1686 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms