RNA–Protein interactions for RNA: ENST00000589056.5

PIK3C3-210, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2 BASIC

Gene PIK3C3, Length 2,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-210ENST00000589056 MRS2Q9HD23 443 aa16.97■□□□□ 0.31
PIK3C3-210ENST00000589056 NSD2O96028 1365 aa16.96■□□□□ 0.31
PIK3C3-210ENST00000589056 LTBP4Q8N2S1 1624 aa16.96■□□□□ 0.31
PIK3C3-210ENST00000589056 KIF1AQ12756 1690 aa16.96■□□□□ 0.31
PIK3C3-210ENST00000589056 NME9Q86XW9 330 aa16.96■□□□□ 0.31
PIK3C3-210ENST00000589056 FOXO3O43524 673 aa16.95■□□□□ 0.3
PIK3C3-210ENST00000589056 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
PIK3C3-210ENST00000589056 PSME1Q06323 249 aa16.94■□□□□ 0.3
PIK3C3-210ENST00000589056 YTHDC1Q96MU7 727 aaKnown RBP16.94■□□□□ 0.3
PIK3C3-210ENST00000589056 TTC21BQ7Z4L5 1316 aa16.94■□□□□ 0.3
PIK3C3-210ENST00000589056 PPP2R1AP30153 589 aa16.93■□□□□ 0.3
PIK3C3-210ENST00000589056 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
PIK3C3-210ENST00000589056 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
PIK3C3-210ENST00000589056 XPCQ01831 940 aaPredicted RBP16.93■□□□□ 0.3
PIK3C3-210ENST00000589056 SLAIN2Q9P270 581 aa16.91■□□□□ 0.3
PIK3C3-210ENST00000589056 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
PIK3C3-210ENST00000589056 SSH2Q76I76 1423 aa16.91■□□□□ 0.3
PIK3C3-210ENST00000589056 MAP2P11137 1827 aaKnown RBP16.91■□□□□ 0.3
PIK3C3-210ENST00000589056 COG3Q96JB2 828 aa16.9■□□□□ 0.3
PIK3C3-210ENST00000589056 BRD4O60885 1362 aaPredicted RBP16.9■□□□□ 0.3
PIK3C3-210ENST00000589056 DDX17Q92841 729 aaKnown RBP16.9■□□□□ 0.3
PIK3C3-210ENST00000589056 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
PIK3C3-210ENST00000589056 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
PIK3C3-210ENST00000589056 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
PIK3C3-210ENST00000589056 ABTB2Q8N961 1025 aa16.88■□□□□ 0.29
PIK3C3-210ENST00000589056 BRINP3Q76B58 766 aa16.87■□□□□ 0.29
PIK3C3-210ENST00000589056 SOX12O15370 315 aa16.87■□□□□ 0.29
PIK3C3-210ENST00000589056 LMOD2Q6P5Q4 547 aa16.87■□□□□ 0.29
PIK3C3-210ENST00000589056 KRT28Q7Z3Y7 464 aa16.87■□□□□ 0.29
PIK3C3-210ENST00000589056 FBLN1P23142 703 aa16.86■□□□□ 0.29
PIK3C3-210ENST00000589056 TRPM3Q9HCF6 1732 aaPredicted RBP16.86■□□□□ 0.29
PIK3C3-210ENST00000589056 NLRP6P59044 892 aa16.85■□□□□ 0.29
PIK3C3-210ENST00000589056 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
PIK3C3-210ENST00000589056 OVOS2A0A0J9YW53 1432 aa16.85■□□□□ 0.29
PIK3C3-210ENST00000589056 OVOS2Q6IE36 1432 aa16.85■□□□□ 0.29
PIK3C3-210ENST00000589056 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
PIK3C3-210ENST00000589056 MARF1Q9Y4F3 1742 aaKnown RBP16.85■□□□□ 0.29
PIK3C3-210ENST00000589056 MTHFSP49914 203 aa16.84■□□□□ 0.29
PIK3C3-210ENST00000589056 PPM1GO15355 546 aaPredicted RBP16.84■□□□□ 0.29
PIK3C3-210ENST00000589056 ROBO1Q9Y6N7 1651 aa16.82■□□□□ 0.28
PIK3C3-210ENST00000589056 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
PIK3C3-210ENST00000589056 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
PIK3C3-210ENST00000589056 USP31Q70CQ4 1352 aa16.81■□□□□ 0.28
PIK3C3-210ENST00000589056 PXDNQ92626 1479 aa16.81■□□□□ 0.28
PIK3C3-210ENST00000589056 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
PIK3C3-210ENST00000589056 ALS2Q96Q42 1657 aa16.81■□□□□ 0.28
PIK3C3-210ENST00000589056 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
PIK3C3-210ENST00000589056 CFAP53Q96M91 514 aa16.79■□□□□ 0.28
PIK3C3-210ENST00000589056 EMILIN1Q9Y6C2 1016 aa16.79■□□□□ 0.28
PIK3C3-210ENST00000589056 NHSL1Q5SYE7 1610 aa16.79■□□□□ 0.28
PIK3C3-210ENST00000589056 POLKQ9UBT6 870 aa16.79■□□□□ 0.28
PIK3C3-210ENST00000589056 WDR43Q15061 677 aaKnown RBP eCLIP16.77■□□□□ 0.28
PIK3C3-210ENST00000589056 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.28
PIK3C3-210ENST00000589056 LTN1O94822 1766 aa16.77■□□□□ 0.28
PIK3C3-210ENST00000589056 PIP4K2BP78356 416 aa16.77■□□□□ 0.27
PIK3C3-210ENST00000589056 TNS3Q68CZ2 1445 aa16.77■□□□□ 0.27
PIK3C3-210ENST00000589056 SHPRHQ149N8 1683 aa16.77■□□□□ 0.27
PIK3C3-210ENST00000589056 TOM1O60784 492 aa16.76■□□□□ 0.27
PIK3C3-210ENST00000589056 SBNO1A3KN83 1393 aa16.76■□□□□ 0.27
PIK3C3-210ENST00000589056 UBAP1LF5GYI3 381 aa16.74■□□□□ 0.27
PIK3C3-210ENST00000589056 PEAK1Q9H792 1746 aa16.74■□□□□ 0.27
PIK3C3-210ENST00000589056 SOS2Q07890 1332 aaPredicted RBP16.74■□□□□ 0.27
PIK3C3-210ENST00000589056 SPATA31A3Q5VYP0 1347 aa16.74■□□□□ 0.27
PIK3C3-210ENST00000589056 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
PIK3C3-210ENST00000589056 HNRNPUQ00839 825 aaKnown RBP eCLIP16.74■□□□□ 0.27
PIK3C3-210ENST00000589056 ZBTB7CA1YPR0 619 aa16.73■□□□□ 0.27
PIK3C3-210ENST00000589056 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
PIK3C3-210ENST00000589056 ADAMTS8Q9UP79 889 aa16.73■□□□□ 0.27
PIK3C3-210ENST00000589056 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
PIK3C3-210ENST00000589056 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
PIK3C3-210ENST00000589056 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
PIK3C3-210ENST00000589056 COL3A1P02461 1466 aaPredicted RBP16.72■□□□□ 0.27
PIK3C3-210ENST00000589056 KCNH5Q8NCM2 988 aa16.72■□□□□ 0.27
PIK3C3-210ENST00000589056 CERKQ8TCT0 537 aa16.72■□□□□ 0.27
PIK3C3-210ENST00000589056 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
PIK3C3-210ENST00000589056 NFAT5O94916 1531 aa16.72■□□□□ 0.27
PIK3C3-210ENST00000589056 PHRF1Q9P1Y6 1649 aaKnown RBP16.71■□□□□ 0.27
PIK3C3-210ENST00000589056 AMPHP49418 695 aa16.71■□□□□ 0.27
PIK3C3-210ENST00000589056 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
PIK3C3-210ENST00000589056 CABLES1Q8TDN4 633 aa16.71■□□□□ 0.27
PIK3C3-210ENST00000589056 PHLPP1O60346 1717 aa16.71■□□□□ 0.27
PIK3C3-210ENST00000589056 U2SURPO15042 1029 aaKnown RBP16.71■□□□□ 0.27
PIK3C3-210ENST00000589056 DIAPH1O60610 1272 aaKnown RBP16.71■□□□□ 0.27
PIK3C3-210ENST00000589056 GCP02774 474 aa16.71■□□□□ 0.27
PIK3C3-210ENST00000589056 SLIT3O75094 1523 aa16.71■□□□□ 0.26
PIK3C3-210ENST00000589056 PNPLA6Q8IY17 1366 aa16.7■□□□□ 0.26
PIK3C3-210ENST00000589056 IQSEC2Q5JU85 1478 aa16.7■□□□□ 0.26
PIK3C3-210ENST00000589056 USP19O94966 1318 aa16.7■□□□□ 0.26
PIK3C3-210ENST00000589056 AHDC1Q5TGY3 1603 aaPredicted RBP16.7■□□□□ 0.26
PIK3C3-210ENST00000589056 CRYBG1Q9Y4K1 1723 aa16.69■□□□□ 0.26
PIK3C3-210ENST00000589056 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
PIK3C3-210ENST00000589056 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
PIK3C3-210ENST00000589056 HSP90AB2PQ58FF8 381 aa16.69■□□□□ 0.26
PIK3C3-210ENST00000589056 NUDCQ9Y266 331 aa16.69■□□□□ 0.26
PIK3C3-210ENST00000589056 FLT4P35916 1363 aa16.68■□□□□ 0.26
PIK3C3-210ENST00000589056 CCDC146Q8IYE0 955 aa16.68■□□□□ 0.26
PIK3C3-210ENST00000589056 ZC3H6P61129 1189 aaKnown RBP16.67■□□□□ 0.26
PIK3C3-210ENST00000589056 INSRP06213 1382 aa16.67■□□□□ 0.26
PIK3C3-210ENST00000589056 HAP1P54257 671 aaPredicted RBP16.66■□□□□ 0.26
PIK3C3-210ENST00000589056 RGPD5Q99666 1765 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms