RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 NDUFB9Q9Y6M9 179 aa12.45□□□□□ -0.42
ATG4D-210ENST00000588972 ARAP3Q8WWN8 1544 aa12.44□□□□□ -0.42
ATG4D-210ENST00000588972 IRF5Q13568 498 aa12.44□□□□□ -0.42
ATG4D-210ENST00000588972 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
ATG4D-210ENST00000588972 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
ATG4D-210ENST00000588972 POTEHQ6S545 545 aa12.43□□□□□ -0.42
ATG4D-210ENST00000588972 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
ATG4D-210ENST00000588972 SLC10A3P09131 477 aa12.41□□□□□ -0.42
ATG4D-210ENST00000588972 RSPH4AQ5TD94 716 aa12.41□□□□□ -0.42
ATG4D-210ENST00000588972 HLA-CQ95604 372 aa12.41□□□□□ -0.42
ATG4D-210ENST00000588972 KCNH8Q96L42 1107 aa12.41□□□□□ -0.42
ATG4D-210ENST00000588972 KCNK17Q96T54 332 aa12.41□□□□□ -0.42
ATG4D-210ENST00000588972 HMX1Q9NP08 348 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-210ENST00000588972 GUCA2AQ02747 115 aa12.4□□□□□ -0.42
ATG4D-210ENST00000588972 ADAMTS19Q8TE59 1207 aa12.4□□□□□ -0.42
ATG4D-210ENST00000588972 KIAA1468Q9P260 1216 aa12.4□□□□□ -0.42
ATG4D-210ENST00000588972 ABCA9Q8IUA7 1624 aa12.4□□□□□ -0.42
ATG4D-210ENST00000588972 ADAMTSL3P82987 1691 aa12.39□□□□□ -0.43
ATG4D-210ENST00000588972 GPR37L1O60883 481 aa12.39□□□□□ -0.43
ATG4D-210ENST00000588972 HOXB1P14653 301 aaPredicted RBP12.39□□□□□ -0.43
ATG4D-210ENST00000588972 CTDSPL2Q05D32 466 aa12.39□□□□□ -0.43
ATG4D-210ENST00000588972 TRIM34Q9BYJ4 488 aa12.39□□□□□ -0.43
ATG4D-210ENST00000588972 SCUBE2Q9NQ36 999 aa12.39□□□□□ -0.43
ATG4D-210ENST00000588972 PTPRMP28827 1452 aa12.39□□□□□ -0.43
ATG4D-210ENST00000588972 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
ATG4D-210ENST00000588972 FBXO41Q8TF61 875 aa12.38□□□□□ -0.43
ATG4D-210ENST00000588972 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
ATG4D-210ENST00000588972 WASHC4Q2M389 1173 aa12.37□□□□□ -0.43
ATG4D-210ENST00000588972 HDGFL1Q5TGJ6 251 aa12.37□□□□□ -0.43
ATG4D-210ENST00000588972 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
ATG4D-210ENST00000588972 PHLDB1Q86UU1 1377 aa12.37□□□□□ -0.43
ATG4D-210ENST00000588972 PRXQ9BXM0 1461 aa12.36□□□□□ -0.43
ATG4D-210ENST00000588972 MTMR2Q13614 643 aa12.36□□□□□ -0.43
ATG4D-210ENST00000588972 PCF11O94913 1555 aaKnown RBP12.35□□□□□ -0.43
ATG4D-210ENST00000588972 MAMSTRQ6ZN01 415 aa12.35□□□□□ -0.43
ATG4D-210ENST00000588972 FRMPD1Q5SYB0 1578 aa12.35□□□□□ -0.43
ATG4D-210ENST00000588972 ATP10BO94823 1461 aa12.34□□□□□ -0.43
ATG4D-210ENST00000588972 NEO1Q92859 1461 aa12.34□□□□□ -0.43
ATG4D-210ENST00000588972 BCORL1Q5H9F3 1711 aa12.34□□□□□ -0.43
ATG4D-210ENST00000588972 HELBQ8NG08 1087 aaPredicted RBP12.34□□□□□ -0.43
ATG4D-210ENST00000588972 PBXIP1Q96AQ6 731 aa12.34□□□□□ -0.43
ATG4D-210ENST00000588972 MADDQ8WXG6 1647 aa12.33□□□□□ -0.43
ATG4D-210ENST00000588972 LRRN4Q8WUT4 740 aa12.33□□□□□ -0.44
ATG4D-210ENST00000588972 ARHGEF40Q8TER5 1519 aa12.32□□□□□ -0.44
ATG4D-210ENST00000588972 CFAP99D6REC4 459 aa12.32□□□□□ -0.44
ATG4D-210ENST00000588972 CFAP70Q5T0N1 1121 aa12.32□□□□□ -0.44
ATG4D-210ENST00000588972 FAM9AQ8IZU1 332 aaPredicted RBP12.32□□□□□ -0.44
ATG4D-210ENST00000588972 LMTK3Q96Q04 1460 aa12.32□□□□□ -0.44
ATG4D-210ENST00000588972 SAMD9Q5K651 1589 aa12.31□□□□□ -0.44
ATG4D-210ENST00000588972 RAPGEF6Q8TEU7 1601 aa12.31□□□□□ -0.44
ATG4D-210ENST00000588972 SNPHO15079 494 aa12.31□□□□□ -0.44
ATG4D-210ENST00000588972 PDE4CQ08493 712 aa12.31□□□□□ -0.44
ATG4D-210ENST00000588972 VAC14Q08AM6 782 aa12.31□□□□□ -0.44
ATG4D-210ENST00000588972 TSC1Q92574 1164 aa12.31□□□□□ -0.44
ATG4D-210ENST00000588972 RABGEF1Q9UJ41 708 aa12.31□□□□□ -0.44
ATG4D-210ENST00000588972 PSEN2P49810 448 aa12.3□□□□□ -0.44
ATG4D-210ENST00000588972 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
ATG4D-210ENST00000588972 EEA1Q15075 1411 aa12.29□□□□□ -0.44
ATG4D-210ENST00000588972 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.29□□□□□ -0.44
ATG4D-210ENST00000588972 RAPGEF3O95398 923 aa12.29□□□□□ -0.44
ATG4D-210ENST00000588972 RFX1P22670 979 aa12.29□□□□□ -0.44
ATG4D-210ENST00000588972 C6orf229H3BNL8 230 aa12.28□□□□□ -0.44
ATG4D-210ENST00000588972 SRPK2P78362 688 aaKnown RBP12.28□□□□□ -0.44
ATG4D-210ENST00000588972 FUT2Q10981 343 aa12.28□□□□□ -0.44
ATG4D-210ENST00000588972 EPS8L1Q8TE68 723 aa12.28□□□□□ -0.44
ATG4D-210ENST00000588972 PPP1R12CQ9BZL4 782 aa12.28□□□□□ -0.44
ATG4D-210ENST00000588972 ALG2Q9H553 416 aa12.28□□□□□ -0.44
ATG4D-210ENST00000588972 RIMS1Q86UR5 1692 aaKnown RBP12.28□□□□□ -0.44
ATG4D-210ENST00000588972 CFAP74Q9C0B2 1584 aa12.27□□□□□ -0.44
ATG4D-210ENST00000588972 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.45
ATG4D-210ENST00000588972 RICTORQ6R327 1708 aa12.27□□□□□ -0.45
ATG4D-210ENST00000588972 HDGFP51858 240 aaKnown RBP12.26□□□□□ -0.45
ATG4D-210ENST00000588972 SLC4A5Q9BY07 1137 aa12.26□□□□□ -0.45
ATG4D-210ENST00000588972 GZF1Q9H116 711 aaPredicted RBP12.26□□□□□ -0.45
ATG4D-210ENST00000588972 ARID4BQ4LE39 1312 aaPredicted RBP12.26□□□□□ -0.45
ATG4D-210ENST00000588972 NUP153P49790 1475 aaKnown RBP12.26□□□□□ -0.45
ATG4D-210ENST00000588972 FAM98CQ17RN3 349 aaKnown RBP12.25□□□□□ -0.45
ATG4D-210ENST00000588972 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
ATG4D-210ENST00000588972 CFHP08603 1231 aa12.24□□□□□ -0.45
ATG4D-210ENST00000588972 SLC4A3P48751 1232 aa12.24□□□□□ -0.45
ATG4D-210ENST00000588972 ZMYM4Q5VZL5 1548 aa12.24□□□□□ -0.45
ATG4D-210ENST00000588972 USTQ9Y2C2 406 aa12.24□□□□□ -0.45
ATG4D-210ENST00000588972 FANCAO15360 1455 aa12.23□□□□□ -0.45
ATG4D-210ENST00000588972 DENND4BO75064 1496 aaPredicted RBP12.23□□□□□ -0.45
ATG4D-210ENST00000588972 FHOD3Q2V2M9 1422 aa12.23□□□□□ -0.45
ATG4D-210ENST00000588972 TMCO4Q5TGY1 634 aa12.23□□□□□ -0.45
ATG4D-210ENST00000588972 SYMPKQ92797 1274 aaKnown RBP12.23□□□□□ -0.45
ATG4D-210ENST00000588972 EFCAB5A4FU69 1503 aa12.22□□□□□ -0.45
ATG4D-210ENST00000588972 POGZQ7Z3K3 1410 aa12.22□□□□□ -0.45
ATG4D-210ENST00000588972 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
ATG4D-210ENST00000588972 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
ATG4D-210ENST00000588972 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
ATG4D-210ENST00000588972 ATP6V1AP38606 617 aa12.22□□□□□ -0.45
ATG4D-210ENST00000588972 POTEEQ6S8J3 1075 aa12.22□□□□□ -0.45
ATG4D-210ENST00000588972 PRR7Q8TB68 274 aa12.22□□□□□ -0.45
ATG4D-210ENST00000588972 UCN2Q96RP3 112 aa12.22□□□□□ -0.45
ATG4D-210ENST00000588972 CSB-PGBD3P0DP91 1061 aa12.21□□□□□ -0.45
ATG4D-210ENST00000588972 NR6A1Q15406 480 aa12.21□□□□□ -0.45
ATG4D-210ENST00000588972 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
ATG4D-210ENST00000588972 SAMD7Q7Z3H4 446 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms