RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 PRR36Q9H6K5 1346 aa16.44■□□□□ 0.22
CALR-206ENST00000588454 ACIN1Q9UKV3 1341 aaKnown RBP16.44■□□□□ 0.22
CALR-206ENST00000588454 R3HDM1Q15032 1099 aaKnown RBP16.43■□□□□ 0.22
CALR-206ENST00000588454 HIRIP3Q9BW71 556 aaPredicted RBP16.43■□□□□ 0.22
CALR-206ENST00000588454 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
CALR-206ENST00000588454 EIF3AQ14152 1382 aaKnown RBP16.41■□□□□ 0.22
CALR-206ENST00000588454 THSD7AQ9UPZ6 1657 aa16.41■□□□□ 0.22
CALR-206ENST00000588454 WASLO00401 505 aaPredicted RBP16.41■□□□□ 0.22
CALR-206ENST00000588454 ADGRB1O14514 1584 aa16.41■□□□□ 0.22
CALR-206ENST00000588454 EZH2Q15910 746 aaKnown RBP16.4■□□□□ 0.22
CALR-206ENST00000588454 NGDNQ8NEJ9 315 aaKnown RBP16.4■□□□□ 0.22
CALR-206ENST00000588454 CAMKK2Q96RR4 588 aa16.4■□□□□ 0.22
CALR-206ENST00000588454 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
CALR-206ENST00000588454 MINK1Q8N4C8 1332 aaPredicted RBP16.4■□□□□ 0.22
CALR-206ENST00000588454 CRYBG1Q9Y4K1 1723 aa16.39■□□□□ 0.21
CALR-206ENST00000588454 SPATA31A1Q5TZJ5 1347 aa16.39■□□□□ 0.21
CALR-206ENST00000588454 TULP4Q9NRJ4 1543 aa16.39■□□□□ 0.21
CALR-206ENST00000588454 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
CALR-206ENST00000588454 FAM196AQ6ZSG2 479 aa16.38■□□□□ 0.21
CALR-206ENST00000588454 TNS1Q9HBL0 1735 aaKnown RBP16.38■□□□□ 0.21
CALR-206ENST00000588454 TRIM37O94972 964 aa16.37■□□□□ 0.21
CALR-206ENST00000588454 KIAA0232Q92628 1395 aa16.36■□□□□ 0.21
CALR-206ENST00000588454 PARD3Q8TEW0 1356 aa16.35■□□□□ 0.21
CALR-206ENST00000588454 APBA3O96018 575 aa16.34■□□□□ 0.21
CALR-206ENST00000588454 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
CALR-206ENST00000588454 NUDT16Q96DE0 195 aaKnown RBP16.33■□□□□ 0.2
CALR-206ENST00000588454 STAC3Q96MF2 364 aa16.33■□□□□ 0.2
CALR-206ENST00000588454 STRN4Q9NRL3 753 aa16.33■□□□□ 0.2
CALR-206ENST00000588454 KDM2AQ9Y2K7 1162 aa16.33■□□□□ 0.2
CALR-206ENST00000588454 ZC3H6P61129 1189 aaKnown RBP16.32■□□□□ 0.2
CALR-206ENST00000588454 BARGINQ6ZT62 677 aa16.32■□□□□ 0.2
CALR-206ENST00000588454 DCAF11Q8TEB1 546 aa16.32■□□□□ 0.2
CALR-206ENST00000588454 ATP7BP35670 1465 aa16.3■□□□□ 0.2
CALR-206ENST00000588454 PDE3BQ13370 1112 aa16.3■□□□□ 0.2
CALR-206ENST00000588454 ITSN1Q15811 1721 aa16.29■□□□□ 0.2
CALR-206ENST00000588454 EVA1CP58658 441 aa16.29■□□□□ 0.2
CALR-206ENST00000588454 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
CALR-206ENST00000588454 USP35Q9P2H5 1018 aa16.29■□□□□ 0.2
CALR-206ENST00000588454 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
CALR-206ENST00000588454 NBPF8Q3BBV2 869 aa16.28■□□□□ 0.2
CALR-206ENST00000588454 NBPF14Q5TI25 921 aa16.28■□□□□ 0.2
CALR-206ENST00000588454 CDK19Q9BWU1 502 aa16.28■□□□□ 0.2
CALR-206ENST00000588454 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
CALR-206ENST00000588454 RREB1Q92766 1687 aa16.27■□□□□ 0.2
CALR-206ENST00000588454 POLR3AO14802 1390 aaPredicted RBP16.27■□□□□ 0.2
CALR-206ENST00000588454 PLEKHG3A1L390 1219 aa16.27■□□□□ 0.2
CALR-206ENST00000588454 LARP1Q6PKG0 1096 aaKnown RBP16.27■□□□□ 0.2
CALR-206ENST00000588454 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.2
CALR-206ENST00000588454 ACEP12821 1306 aa16.26■□□□□ 0.19
CALR-206ENST00000588454 CCDC61Q9Y6R9 512 aa16.26■□□□□ 0.19
CALR-206ENST00000588454 CAMTA1Q9Y6Y1 1673 aa16.26■□□□□ 0.19
CALR-206ENST00000588454 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
CALR-206ENST00000588454 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
CALR-206ENST00000588454 THRAP3Q9Y2W1 955 aaKnown RBP16.25■□□□□ 0.19
CALR-206ENST00000588454 NUP188Q5SRE5 1749 aa16.25■□□□□ 0.19
CALR-206ENST00000588454 CPDO75976 1380 aa16.25■□□□□ 0.19
CALR-206ENST00000588454 YY1P25490 414 aa16.24■□□□□ 0.19
CALR-206ENST00000588454 ABTB2Q8N961 1025 aa16.24■□□□□ 0.19
CALR-206ENST00000588454 C11orf95C9JLR9 678 aaPredicted RBP16.23■□□□□ 0.19
CALR-206ENST00000588454 USP19O94966 1318 aa16.22■□□□□ 0.19
CALR-206ENST00000588454 LMO7Q8WWI1 1683 aa16.22■□□□□ 0.19
CALR-206ENST00000588454 KCNQ2O43526 872 aa16.22■□□□□ 0.19
CALR-206ENST00000588454 SPON1Q9HCB6 807 aa16.22■□□□□ 0.19
CALR-206ENST00000588454 GCP02774 474 aa16.21■□□□□ 0.19
CALR-206ENST00000588454 NRKQ7Z2Y5 1582 aa16.21■□□□□ 0.18
CALR-206ENST00000588454 TOPAZ1Q8N9V7 1692 aa16.21■□□□□ 0.18
CALR-206ENST00000588454 UTRNP46939 3433 aa16.2■□□□□ 0.18
CALR-206ENST00000588454 NLRP13Q86W25 1043 aa16.2■□□□□ 0.18
CALR-206ENST00000588454 PPP1R1BQ9UD71 204 aaPredicted RBP16.19■□□□□ 0.18
CALR-206ENST00000588454 PARP4Q9UKK3 1724 aaKnown RBP16.19■□□□□ 0.18
CALR-206ENST00000588454 PLSCR1O15162 318 aa16.18■□□□□ 0.18
CALR-206ENST00000588454 COL5A2P05997 1499 aaPredicted RBP16.17■□□□□ 0.18
CALR-206ENST00000588454 NINLQ9Y2I6 1382 aa16.17■□□□□ 0.18
CALR-206ENST00000588454 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
CALR-206ENST00000588454 CRB1P82279 1406 aa16.16■□□□□ 0.18
CALR-206ENST00000588454 BRD4O60885 1362 aaPredicted RBP16.15■□□□□ 0.18
CALR-206ENST00000588454 SBF2Q86WG5 1849 aa16.15■□□□□ 0.18
CALR-206ENST00000588454 OVOS2A0A0G2JMS6 1433 aa16.15■□□□□ 0.18
CALR-206ENST00000588454 OVOS2A0A0J9YW53 1432 aa16.15■□□□□ 0.18
CALR-206ENST00000588454 OVOS2Q6IE36 1432 aa16.15■□□□□ 0.18
CALR-206ENST00000588454 PEAK1Q9H792 1746 aa16.15■□□□□ 0.18
CALR-206ENST00000588454 DDB1Q16531 1140 aa16.14■□□□□ 0.17
CALR-206ENST00000588454 KIAA1210Q9ULL0 1709 aa16.14■□□□□ 0.17
CALR-206ENST00000588454 AATKQ6ZMQ8 1374 aa16.13■□□□□ 0.17
CALR-206ENST00000588454 RGPD3A6NKT7 1758 aaPredicted RBP16.13■□□□□ 0.17
CALR-206ENST00000588454 RGPD4Q7Z3J3 1758 aa16.13■□□□□ 0.17
CALR-206ENST00000588454 PPIP5K1Q6PFW1 1433 aa16.13■□□□□ 0.17
CALR-206ENST00000588454 SRPK2P78362 688 aaKnown RBP16.13■□□□□ 0.17
CALR-206ENST00000588454 NBPF1Q3BBV0 1214 aa16.13■□□□□ 0.17
CALR-206ENST00000588454 BCL11BQ9C0K0 894 aaPredicted RBP16.13■□□□□ 0.17
CALR-206ENST00000588454 PROM2Q8N271 834 aa16.12■□□□□ 0.17
CALR-206ENST00000588454 ANO8Q9HCE9 1232 aaPredicted RBP16.12■□□□□ 0.17
CALR-206ENST00000588454 CABP2Q9NPB3 220 aa16.12■□□□□ 0.17
CALR-206ENST00000588454 NLRP6P59044 892 aa16.11■□□□□ 0.17
CALR-206ENST00000588454 PTF1AQ7RTS3 328 aa16.11■□□□□ 0.17
CALR-206ENST00000588454 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
CALR-206ENST00000588454 TOM1L2Q6ZVM7 507 aa16.1■□□□□ 0.17
CALR-206ENST00000588454 MARCH10Q8NA82 808 aaPredicted RBP16.1■□□□□ 0.17
CALR-206ENST00000588454 CABP1Q9NZU7 370 aa16.1■□□□□ 0.17
CALR-206ENST00000588454 CENPJQ9HC77 1338 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms