RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 BRD1O95696 1058 aa9.51□□□□□ -0.89
TUBD1-208ENST00000588009 EIF4G2P78344 907 aaKnown RBP eCLIP9.51□□□□□ -0.89
TUBD1-208ENST00000588009 TMCO4Q5TGY1 634 aa9.51□□□□□ -0.89
TUBD1-208ENST00000588009 LRCH3Q96II8 777 aa9.5□□□□□ -0.89
TUBD1-208ENST00000588009 NR1H3Q13133 447 aa9.49□□□□□ -0.89
TUBD1-208ENST00000588009 PRR14Q9BWN1 585 aa9.49□□□□□ -0.89
TUBD1-208ENST00000588009 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.49□□□□□ -0.89
TUBD1-208ENST00000588009 MAFBQ9Y5Q3 323 aaPredicted RBP9.49□□□□□ -0.89
TUBD1-208ENST00000588009 A0A0G2JS52 829 aa9.48□□□□□ -0.89
TUBD1-208ENST00000588009 ATG7O95352 703 aa9.48□□□□□ -0.89
TUBD1-208ENST00000588009 KCNA1Q09470 495 aa9.48□□□□□ -0.89
TUBD1-208ENST00000588009 CDCA8Q53HL2 280 aa9.48□□□□□ -0.89
TUBD1-208ENST00000588009 BLOC1S3Q6QNY0 202 aa9.48□□□□□ -0.89
TUBD1-208ENST00000588009 RNF19BQ6ZMZ0 732 aa9.48□□□□□ -0.89
TUBD1-208ENST00000588009 TBC1D9Q6ZT07 1266 aa9.48□□□□□ -0.89
TUBD1-208ENST00000588009 USB1Q9BQ65 265 aaKnown RBP9.48□□□□□ -0.89
TUBD1-208ENST00000588009 BRICD5Q6PL45 260 aa9.47□□□□□ -0.89
TUBD1-208ENST00000588009 SALL2Q9Y467 1007 aaPredicted RBP9.47□□□□□ -0.89
TUBD1-208ENST00000588009 CARNS1A5YM72 827 aa9.46□□□□□ -0.9
TUBD1-208ENST00000588009 ATP9BO43861 1147 aa9.46□□□□□ -0.9
TUBD1-208ENST00000588009 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.9
TUBD1-208ENST00000588009 ZBBXA8MT70 800 aa9.45□□□□□ -0.9
TUBD1-208ENST00000588009 FBXO45P0C2W1 286 aa9.45□□□□□ -0.9
TUBD1-208ENST00000588009 BCAMP50895 628 aa9.45□□□□□ -0.9
TUBD1-208ENST00000588009 MFAP1P55081 439 aaKnown RBP9.45□□□□□ -0.9
TUBD1-208ENST00000588009 RGS22Q8NE09 1264 aa9.45□□□□□ -0.9
TUBD1-208ENST00000588009 FKBPLQ9UIM3 349 aa9.45□□□□□ -0.9
TUBD1-208ENST00000588009 F12P00748 615 aaPredicted RBP9.44□□□□□ -0.9
TUBD1-208ENST00000588009 SCUBE3Q8IX30 993 aa9.44□□□□□ -0.9
TUBD1-208ENST00000588009 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
TUBD1-208ENST00000588009 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
TUBD1-208ENST00000588009 TMEM88BA6NKF7 163 aa9.43□□□□□ -0.9
TUBD1-208ENST00000588009 FMNL1O95466 1100 aaPredicted RBP9.42□□□□□ -0.9
TUBD1-208ENST00000588009 APLP1P51693 650 aa9.42□□□□□ -0.9
TUBD1-208ENST00000588009 PPP4CP60510 307 aa9.42□□□□□ -0.9
TUBD1-208ENST00000588009 KCNC4Q03721 635 aa9.42□□□□□ -0.9
TUBD1-208ENST00000588009 KANK4Q5T7N3 995 aaPredicted RBP9.42□□□□□ -0.9
TUBD1-208ENST00000588009 THAP11Q96EK4 314 aa9.42□□□□□ -0.9
TUBD1-208ENST00000588009 MTMR7Q9Y216 660 aa9.42□□□□□ -0.9
TUBD1-208ENST00000588009 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
TUBD1-208ENST00000588009 JUNDP17535 347 aa9.41□□□□□ -0.9
TUBD1-208ENST00000588009 NFATC2IPQ8NCF5 419 aa9.41□□□□□ -0.9
TUBD1-208ENST00000588009 WBP1LQ9NX94 342 aa9.41□□□□□ -0.9
TUBD1-208ENST00000588009 PIK3CDO00329 1044 aa9.4□□□□□ -0.9
TUBD1-208ENST00000588009 NR1I2O75469 434 aa9.4□□□□□ -0.9
TUBD1-208ENST00000588009 PTPRNQ16849 979 aa9.4□□□□□ -0.9
TUBD1-208ENST00000588009 MAP10Q9P2G4 905 aa9.4□□□□□ -0.9
TUBD1-208ENST00000588009 HPS5Q9UPZ3 1129 aa9.4□□□□□ -0.9
TUBD1-208ENST00000588009 IRX2Q9BZI1 471 aaPredicted RBP9.39□□□□□ -0.91
TUBD1-208ENST00000588009 PCDHB3Q9Y5E6 796 aa9.39□□□□□ -0.91
TUBD1-208ENST00000588009 ELOAQ14241 798 aaKnown RBP9.38□□□□□ -0.91
TUBD1-208ENST00000588009 SKIP12755 728 aa9.37□□□□□ -0.91
TUBD1-208ENST00000588009 CTHP32929 405 aa9.37□□□□□ -0.91
TUBD1-208ENST00000588009 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
TUBD1-208ENST00000588009 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
TUBD1-208ENST00000588009 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
TUBD1-208ENST00000588009 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
TUBD1-208ENST00000588009 IVNS1ABPQ9Y6Y0 642 aa9.36□□□□□ -0.91
TUBD1-208ENST00000588009 PLEKHM2Q8IWE5 1019 aa9.35□□□□□ -0.91
TUBD1-208ENST00000588009 EVA1BQ9NVM1 165 aa9.35□□□□□ -0.91
TUBD1-208ENST00000588009 GPSM3Q9Y4H4 160 aa9.35□□□□□ -0.91
TUBD1-208ENST00000588009 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
TUBD1-208ENST00000588009 CCNYL3P0C7X3 344 aa9.34□□□□□ -0.91
TUBD1-208ENST00000588009 PTK2Q05397 1052 aa9.34□□□□□ -0.91
TUBD1-208ENST00000588009 MSS51Q4VC12 460 aa9.34□□□□□ -0.91
TUBD1-208ENST00000588009 PDXDC2PQ6P474 469 aa9.34□□□□□ -0.91
TUBD1-208ENST00000588009 ARMC2Q8NEN0 867 aa9.34□□□□□ -0.91
TUBD1-208ENST00000588009 FAM174AQ8TBP5 190 aa9.34□□□□□ -0.91
TUBD1-208ENST00000588009 CEP126Q9P2H0 1117 aa9.34□□□□□ -0.91
TUBD1-208ENST00000588009 ZMIZ1Q9ULJ6 1067 aa9.34□□□□□ -0.91
TUBD1-208ENST00000588009 DXOO77932 396 aaKnown RBP9.33□□□□□ -0.92
TUBD1-208ENST00000588009 KCNH2Q12809 1159 aa9.33□□□□□ -0.92
TUBD1-208ENST00000588009 FOXD4L5Q5VV16 416 aaPredicted RBP9.33□□□□□ -0.92
TUBD1-208ENST00000588009 FAM160A2Q8N612 972 aaPredicted RBP9.33□□□□□ -0.92
TUBD1-208ENST00000588009 FOXD4L4Q8WXT5 416 aaPredicted RBP9.33□□□□□ -0.92
TUBD1-208ENST00000588009 ZNF592Q92610 1267 aa9.33□□□□□ -0.92
TUBD1-208ENST00000588009 GPKOWQ92917 476 aaPredicted RBP eCLIP9.33□□□□□ -0.92
TUBD1-208ENST00000588009 MCCD1P59942 119 aaPredicted RBP9.32□□□□□ -0.92
TUBD1-208ENST00000588009 TMEM164Q5U3C3 297 aa9.32□□□□□ -0.92
TUBD1-208ENST00000588009 B4GALNT3Q6L9W6 998 aa9.32□□□□□ -0.92
TUBD1-208ENST00000588009 DEPDC4Q8N2C3 294 aa9.32□□□□□ -0.92
TUBD1-208ENST00000588009 STK32AQ8WU08 396 aa9.32□□□□□ -0.92
TUBD1-208ENST00000588009 SPSB2Q99619 263 aa9.32□□□□□ -0.92
TUBD1-208ENST00000588009 NOVA2Q9UNW9 492 aaKnown RBP9.32□□□□□ -0.92
TUBD1-208ENST00000588009 GNEQ9Y223 722 aaKnown RBP9.32□□□□□ -0.92
TUBD1-208ENST00000588009 MMP16P51512 607 aa9.31□□□□□ -0.92
TUBD1-208ENST00000588009 SLFNL1Q499Z3 407 aa9.31□□□□□ -0.92
TUBD1-208ENST00000588009 SND1Q7KZF4 910 aaKnown RBP eCLIP9.31□□□□□ -0.92
TUBD1-208ENST00000588009 PHTF2Q8N3S3 785 aa9.31□□□□□ -0.92
TUBD1-208ENST00000588009 NUDT12Q9BQG2 462 aa9.31□□□□□ -0.92
TUBD1-208ENST00000588009 OCSTAMPQ9BR26 566 aa9.31□□□□□ -0.92
TUBD1-208ENST00000588009 MKRN1Q9UHC7 482 aaKnown RBP9.31□□□□□ -0.92
TUBD1-208ENST00000588009 FAM196BA6NMK8 535 aa9.3□□□□□ -0.92
TUBD1-208ENST00000588009 PCDHB9Q9Y5E1 797 aa9.3□□□□□ -0.92
TUBD1-208ENST00000588009 CCDC27Q2M243 656 aa9.29□□□□□ -0.92
TUBD1-208ENST00000588009 NBPF14Q5TI25 921 aa9.29□□□□□ -0.92
TUBD1-208ENST00000588009 RNF135Q8IUD6 432 aa9.29□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L15C9J2P7 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L10C9JJH3 530 aa9.28□□□□□ -0.92
TUBD1-208ENST00000588009 USP17L13C9JLJ4 530 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms