RNA–Protein interactions for RNA: ENST00000587958.1

GRN-210, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-210ENST00000587958 POLR3AO14802 1390 aaPredicted RBP21.32■■□□□ 1
GRN-210ENST00000587958 PLCH1Q4KWH8 1693 aa21.31■■□□□ 1
GRN-210ENST00000587958 ARHGEF10O15013 1369 aa21.3■■□□□ 1
GRN-210ENST00000587958 EVC2Q86UK5 1308 aa21.29■■□□□ 1
GRN-210ENST00000587958 FAM83GA6ND36 823 aa21.29■■□□□ 1
GRN-210ENST00000587958 PHRF1Q9P1Y6 1649 aaKnown RBP21.27■■□□□ 1
GRN-210ENST00000587958 CCER1Q8TC90 406 aaPredicted RBP21.27■■□□□ 1
GRN-210ENST00000587958 ATRNO75882 1429 aa21.27■■□□□ 1
GRN-210ENST00000587958 SLIT2O94813 1529 aa21.26■□□□□ 0.99
GRN-210ENST00000587958 RGS12O14924 1447 aa21.26■□□□□ 0.99
GRN-210ENST00000587958 AKAP12Q02952 1782 aa21.25■□□□□ 0.99
GRN-210ENST00000587958 ST20-MTHFSA0A0A6YYL1 179 aa21.25■□□□□ 0.99
GRN-210ENST00000587958 RBM6P78332 1123 aaKnown RBP21.25■□□□□ 0.99
GRN-210ENST00000587958 TRPC5Q9UL62 973 aaPredicted RBP21.24■□□□□ 0.99
GRN-210ENST00000587958 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.24■□□□□ 0.99
GRN-210ENST00000587958 CHRNA2Q15822 529 aa21.23■□□□□ 0.99
GRN-210ENST00000587958 ABTB2Q8N961 1025 aa21.23■□□□□ 0.99
GRN-210ENST00000587958 ZC3H6P61129 1189 aaKnown RBP21.22■□□□□ 0.99
GRN-210ENST00000587958 UNC5CLQ8IV45 518 aa21.22■□□□□ 0.99
GRN-210ENST00000587958 TESK2Q96S53 571 aa21.22■□□□□ 0.99
GRN-210ENST00000587958 GLI3P10071 1580 aa21.22■□□□□ 0.99
GRN-210ENST00000587958 USP6P35125 1406 aa21.21■□□□□ 0.99
GRN-210ENST00000587958 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
GRN-210ENST00000587958 NWD2Q9ULI1 1742 aa21.21■□□□□ 0.99
GRN-210ENST00000587958 PIK3C2AO00443 1686 aa21.2■□□□□ 0.98
GRN-210ENST00000587958 GJD4Q96KN9 370 aaPredicted RBP21.19■□□□□ 0.98
GRN-210ENST00000587958 SLC12A5Q9H2X9 1139 aa21.19■□□□□ 0.98
GRN-210ENST00000587958 BTG4Q9NY30 223 aa21.19■□□□□ 0.98
GRN-210ENST00000587958 BRWD3Q6RI45 1802 aa21.19■□□□□ 0.98
GRN-210ENST00000587958 SBNO2Q9Y2G9 1366 aa21.19■□□□□ 0.98
GRN-210ENST00000587958 COL14A1Q05707 1796 aaKnown RBP21.18■□□□□ 0.98
GRN-210ENST00000587958 ZRANB1Q9UGI0 708 aa21.18■□□□□ 0.98
GRN-210ENST00000587958 KIAA0232Q92628 1395 aa21.18■□□□□ 0.98
GRN-210ENST00000587958 SSH2Q76I76 1423 aa21.18■□□□□ 0.98
GRN-210ENST00000587958 NRKQ7Z2Y5 1582 aa21.18■□□□□ 0.98
GRN-210ENST00000587958 TMC1Q8TDI8 760 aa21.17■□□□□ 0.98
GRN-210ENST00000587958 CD163L1Q9NR16 1453 aa21.17■□□□□ 0.98
GRN-210ENST00000587958 CDK12Q9NYV4 1490 aaPredicted RBP21.17■□□□□ 0.98
GRN-210ENST00000587958 MON2Q7Z3U7 1717 aa21.16■□□□□ 0.98
GRN-210ENST00000587958 USP47Q96K76 1375 aa21.16■□□□□ 0.98
GRN-210ENST00000587958 CLSPNQ9HAW4 1339 aa21.16■□□□□ 0.98
GRN-210ENST00000587958 CPSF1Q10570 1443 aaKnown RBP21.15■□□□□ 0.98
GRN-210ENST00000587958 PRDM11Q9NQV5 511 aa21.15■□□□□ 0.98
GRN-210ENST00000587958 CCDC9Q9Y3X0 531 aaKnown RBP21.15■□□□□ 0.98
GRN-210ENST00000587958 ATAD2Q6PL18 1390 aa21.14■□□□□ 0.98
GRN-210ENST00000587958 NLRP6P59044 892 aa21.14■□□□□ 0.97
GRN-210ENST00000587958 USP19O94966 1318 aa21.13■□□□□ 0.97
GRN-210ENST00000587958 TTC21BQ7Z4L5 1316 aa21.13■□□□□ 0.97
GRN-210ENST00000587958 ZBTB7CA1YPR0 619 aa21.13■□□□□ 0.97
GRN-210ENST00000587958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.13■□□□□ 0.97
GRN-210ENST00000587958 UPF1Q92900 1129 aaKnown RBP eCLIP21.13■□□□□ 0.97
GRN-210ENST00000587958 KTN1Q86UP2 1357 aaKnown RBP21.12■□□□□ 0.97
GRN-210ENST00000587958 SOX12O15370 315 aa21.12■□□□□ 0.97
GRN-210ENST00000587958 VPS72Q15906 364 aa21.12■□□□□ 0.97
GRN-210ENST00000587958 RGPD5Q99666 1765 aa21.11■□□□□ 0.97
GRN-210ENST00000587958 GCP02774 474 aa21.11■□□□□ 0.97
GRN-210ENST00000587958 NLRP13Q86W25 1043 aa21.11■□□□□ 0.97
GRN-210ENST00000587958 STRN4Q9NRL3 753 aa21.11■□□□□ 0.97
GRN-210ENST00000587958 CAMTA1Q9Y6Y1 1673 aa21.1■□□□□ 0.97
GRN-210ENST00000587958 NME9Q86XW9 330 aa21.09■□□□□ 0.97
GRN-210ENST00000587958 TIMELESSQ9UNS1 1208 aa21.09■□□□□ 0.97
GRN-210ENST00000587958 ZNF692Q9BU19 519 aaPredicted RBP21.08■□□□□ 0.97
GRN-210ENST00000587958 LMO7Q8WWI1 1683 aa21.08■□□□□ 0.96
GRN-210ENST00000587958 SLIT3O75094 1523 aa21.08■□□□□ 0.96
GRN-210ENST00000587958 A0A1W2PP64 1363 aa21.07■□□□□ 0.96
GRN-210ENST00000587958 COL18A1P39060 1754 aa21.06■□□□□ 0.96
GRN-210ENST00000587958 FAM98CQ17RN3 349 aaKnown RBP21.06■□□□□ 0.96
GRN-210ENST00000587958 SEPT12Q8IYM1 358 aa21.06■□□□□ 0.96
GRN-210ENST00000587958 USP35Q9P2H5 1018 aa21.04■□□□□ 0.96
GRN-210ENST00000587958 BRD4O60885 1362 aaPredicted RBP21.04■□□□□ 0.96
GRN-210ENST00000587958 SPATA31A5Q5VU36 1347 aa21.04■□□□□ 0.96
GRN-210ENST00000587958 SPATA31A7Q8IWB4 1347 aa21.04■□□□□ 0.96
GRN-210ENST00000587958 FAM182BQ5T319 152 aa21.03■□□□□ 0.96
GRN-210ENST00000587958 LARP1Q6PKG0 1096 aaKnown RBP21.03■□□□□ 0.96
GRN-210ENST00000587958 CPDO75976 1380 aa21.02■□□□□ 0.96
GRN-210ENST00000587958 A0A0G2JS52 829 aa21.02■□□□□ 0.96
GRN-210ENST00000587958 MYT1Q01538 1121 aa21.02■□□□□ 0.96
GRN-210ENST00000587958 AXIN2Q9Y2T1 843 aa21.02■□□□□ 0.96
GRN-210ENST00000587958 TTC21AQ8NDW8 1320 aa21.02■□□□□ 0.95
GRN-210ENST00000587958 EVA1CP58658 441 aa21.01■□□□□ 0.95
GRN-210ENST00000587958 TMF1P82094 1093 aa21.01■□□□□ 0.95
GRN-210ENST00000587958 HDGFL2Q7Z4V5 671 aaPredicted RBP21.01■□□□□ 0.95
GRN-210ENST00000587958 MYOM1P52179 1685 aa21.01■□□□□ 0.95
GRN-210ENST00000587958 EP400Q96L91 3159 aa21■□□□□ 0.95
GRN-210ENST00000587958 ONECUT3O60422 494 aaPredicted RBP21■□□□□ 0.95
GRN-210ENST00000587958 FBLN1P23142 703 aa21■□□□□ 0.95
GRN-210ENST00000587958 SPATA31A1Q5TZJ5 1347 aa21■□□□□ 0.95
GRN-210ENST00000587958 NFAT5O94916 1531 aa20.99■□□□□ 0.95
GRN-210ENST00000587958 HSPA5P11021 654 aaKnown RBP20.99■□□□□ 0.95
GRN-210ENST00000587958 PUS7Q96PZ0 661 aaKnown RBP20.99■□□□□ 0.95
GRN-210ENST00000587958 LTN1O94822 1766 aa20.99■□□□□ 0.95
GRN-210ENST00000587958 TERF2IPQ9NYB0 399 aa20.98■□□□□ 0.95
GRN-210ENST00000587958 EDC4Q6P2E9 1401 aaKnown RBP20.97■□□□□ 0.95
GRN-210ENST00000587958 USP54Q70EL1 1684 aa20.97■□□□□ 0.95
GRN-210ENST00000587958 THSD7AQ9UPZ6 1657 aa20.97■□□□□ 0.95
GRN-210ENST00000587958 COL5A2P05997 1499 aaPredicted RBP20.97■□□□□ 0.95
GRN-210ENST00000587958 ARHGEF25Q86VW2 580 aa20.97■□□□□ 0.95
GRN-210ENST00000587958 POLR3GLQ9BT43 218 aa20.96■□□□□ 0.95
GRN-210ENST00000587958 USP31Q70CQ4 1352 aa20.96■□□□□ 0.95
GRN-210ENST00000587958 KRT27Q7Z3Y8 459 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms