RNA–Protein interactions for RNA: ENST00000587486.6

CALR-205, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 957 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-205ENST00000587486 PLCH1Q4KWH8 1693 aa23.8■■□□□ 1.4
CALR-205ENST00000587486 ATRNO75882 1429 aa23.79■■□□□ 1.4
CALR-205ENST00000587486 TIMELESSQ9UNS1 1208 aa23.79■■□□□ 1.4
CALR-205ENST00000587486 AKAP12Q02952 1782 aa23.78■■□□□ 1.4
CALR-205ENST00000587486 NWD2Q9ULI1 1742 aa23.78■■□□□ 1.4
CALR-205ENST00000587486 LMOD2Q6P5Q4 547 aa23.77■■□□□ 1.4
CALR-205ENST00000587486 USP21Q9UK80 565 aa23.77■■□□□ 1.4
CALR-205ENST00000587486 USP6P35125 1406 aa23.76■■□□□ 1.39
CALR-205ENST00000587486 SSH2Q76I76 1423 aa23.76■■□□□ 1.39
CALR-205ENST00000587486 NRKQ7Z2Y5 1582 aa23.75■■□□□ 1.39
CALR-205ENST00000587486 QTRT2Q9H974 415 aaKnown RBP23.75■■□□□ 1.39
CALR-205ENST00000587486 CABP1Q9NZU7 370 aa23.75■■□□□ 1.39
CALR-205ENST00000587486 ATAD2Q6PL18 1390 aa23.75■■□□□ 1.39
CALR-205ENST00000587486 NRAPQ86VF7 1730 aa23.74■■□□□ 1.39
CALR-205ENST00000587486 RXRBP28702 533 aa23.74■■□□□ 1.39
CALR-205ENST00000587486 TESK2Q96S53 571 aa23.74■■□□□ 1.39
CALR-205ENST00000587486 BRD4O60885 1362 aaPredicted RBP23.74■■□□□ 1.39
CALR-205ENST00000587486 RGS12O14924 1447 aa23.74■■□□□ 1.39
CALR-205ENST00000587486 PAK3O75914 559 aaPredicted RBP23.73■■□□□ 1.39
CALR-205ENST00000587486 CPSF1Q10570 1443 aaKnown RBP23.73■■□□□ 1.39
CALR-205ENST00000587486 PIK3C2AO00443 1686 aa23.72■■□□□ 1.39
CALR-205ENST00000587486 COL14A1Q05707 1796 aaKnown RBP23.72■■□□□ 1.39
CALR-205ENST00000587486 MON2Q7Z3U7 1717 aa23.71■■□□□ 1.39
CALR-205ENST00000587486 RBM6P78332 1123 aaKnown RBP23.71■■□□□ 1.39
CALR-205ENST00000587486 TRPC5Q9UL62 973 aaPredicted RBP23.71■■□□□ 1.39
CALR-205ENST00000587486 CD163L1Q9NR16 1453 aa23.7■■□□□ 1.38
CALR-205ENST00000587486 USP19O94966 1318 aa23.7■■□□□ 1.38
CALR-205ENST00000587486 GLI3P10071 1580 aa23.69■■□□□ 1.38
CALR-205ENST00000587486 USP47Q96K76 1375 aa23.69■■□□□ 1.38
CALR-205ENST00000587486 PLEKHG5O94827 1062 aa23.69■■□□□ 1.38
CALR-205ENST00000587486 HAP1P54257 671 aaPredicted RBP23.69■■□□□ 1.38
CALR-205ENST00000587486 ST20-MTHFSA0A0A6YYL1 179 aa23.68■■□□□ 1.38
CALR-205ENST00000587486 UNC5CLQ8IV45 518 aa23.68■■□□□ 1.38
CALR-205ENST00000587486 CCER1Q8TC90 406 aaPredicted RBP23.68■■□□□ 1.38
CALR-205ENST00000587486 FAM83GA6ND36 823 aa23.67■■□□□ 1.38
CALR-205ENST00000587486 SLIT3O75094 1523 aa23.65■■□□□ 1.38
CALR-205ENST00000587486 PUS7Q96PZ0 661 aaKnown RBP23.65■■□□□ 1.38
CALR-205ENST00000587486 NUTM2GQ5VZR2 741 aa23.64■■□□□ 1.37
CALR-205ENST00000587486 ABTB2Q8N961 1025 aa23.64■■□□□ 1.37
CALR-205ENST00000587486 LMO7Q8WWI1 1683 aa23.63■■□□□ 1.37
CALR-205ENST00000587486 KIAA0232Q92628 1395 aa23.63■■□□□ 1.37
CALR-205ENST00000587486 GJD4Q96KN9 370 aaPredicted RBP23.62■■□□□ 1.37
CALR-205ENST00000587486 USP54Q70EL1 1684 aa23.62■■□□□ 1.37
CALR-205ENST00000587486 ZNF692Q9BU19 519 aaPredicted RBP23.61■■□□□ 1.37
CALR-205ENST00000587486 VPS72Q15906 364 aa23.6■■□□□ 1.37
CALR-205ENST00000587486 CPDO75976 1380 aa23.6■■□□□ 1.37
CALR-205ENST00000587486 TTC21BQ7Z4L5 1316 aa23.59■■□□□ 1.37
CALR-205ENST00000587486 KTN1Q86UP2 1357 aaKnown RBP23.59■■□□□ 1.37
CALR-205ENST00000587486 NLRP13Q86W25 1043 aa23.58■■□□□ 1.37
CALR-205ENST00000587486 A0A1W2PP64 1363 aa23.57■■□□□ 1.36
CALR-205ENST00000587486 NINLQ9Y2I6 1382 aa23.57■■□□□ 1.36
CALR-205ENST00000587486 PRDM11Q9NQV5 511 aa23.57■■□□□ 1.36
CALR-205ENST00000587486 BTG4Q9NY30 223 aa23.57■■□□□ 1.36
CALR-205ENST00000587486 TTC21AQ8NDW8 1320 aa23.57■■□□□ 1.36
CALR-205ENST00000587486 SLC24A1O60721 1099 aa23.56■■□□□ 1.36
CALR-205ENST00000587486 SLC12A5Q9H2X9 1139 aa23.56■■□□□ 1.36
CALR-205ENST00000587486 CAMTA1Q9Y6Y1 1673 aa23.55■■□□□ 1.36
CALR-205ENST00000587486 GCP02774 474 aa23.55■■□□□ 1.36
CALR-205ENST00000587486 ZC3H6P61129 1189 aaKnown RBP23.55■■□□□ 1.36
CALR-205ENST00000587486 EP400Q96L91 3159 aa23.55■■□□□ 1.36
CALR-205ENST00000587486 EDC4Q6P2E9 1401 aaKnown RBP23.54■■□□□ 1.36
CALR-205ENST00000587486 CHRNA2Q15822 529 aa23.54■■□□□ 1.36
CALR-205ENST00000587486 MYOM1P52179 1685 aa23.54■■□□□ 1.36
CALR-205ENST00000587486 NFAT5O94916 1531 aa23.54■■□□□ 1.36
CALR-205ENST00000587486 COL18A1P39060 1754 aa23.53■■□□□ 1.36
CALR-205ENST00000587486 NLRP6P59044 892 aa23.53■■□□□ 1.36
CALR-205ENST00000587486 BRWD3Q6RI45 1802 aa23.53■■□□□ 1.36
CALR-205ENST00000587486 USP31Q70CQ4 1352 aa23.52■■□□□ 1.36
CALR-205ENST00000587486 ONECUT3O60422 494 aaPredicted RBP23.51■■□□□ 1.35
CALR-205ENST00000587486 TMC1Q8TDI8 760 aa23.51■■□□□ 1.35
CALR-205ENST00000587486 THSD7AQ9UPZ6 1657 aa23.51■■□□□ 1.35
CALR-205ENST00000587486 TMF1P82094 1093 aa23.5■■□□□ 1.35
CALR-205ENST00000587486 UPF1Q92900 1129 aaKnown RBP eCLIP23.5■■□□□ 1.35
CALR-205ENST00000587486 HDGFL2Q7Z4V5 671 aaPredicted RBP23.49■■□□□ 1.35
CALR-205ENST00000587486 SPATA31A5Q5VU36 1347 aa23.49■■□□□ 1.35
CALR-205ENST00000587486 SPATA31A7Q8IWB4 1347 aa23.49■■□□□ 1.35
CALR-205ENST00000587486 TERF2IPQ9NYB0 399 aa23.48■■□□□ 1.35
CALR-205ENST00000587486 ANKRD36BQ8N2N9 1353 aa23.48■■□□□ 1.35
CALR-205ENST00000587486 COL5A2P05997 1499 aaPredicted RBP23.48■■□□□ 1.35
CALR-205ENST00000587486 OVOS2A0A0J9YW53 1432 aa23.47■■□□□ 1.35
CALR-205ENST00000587486 OVOS2Q6IE36 1432 aa23.47■■□□□ 1.35
CALR-205ENST00000587486 AATKQ6ZMQ8 1374 aa23.46■■□□□ 1.35
CALR-205ENST00000587486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.46■■□□□ 1.35
CALR-205ENST00000587486 ZRANB1Q9UGI0 708 aa23.46■■□□□ 1.35
CALR-205ENST00000587486 ABCC6O95255 1503 aa23.45■■□□□ 1.34
CALR-205ENST00000587486 NME9Q86XW9 330 aa23.45■■□□□ 1.34
CALR-205ENST00000587486 SPATA31A1Q5TZJ5 1347 aa23.44■■□□□ 1.34
CALR-205ENST00000587486 CCDC9Q9Y3X0 531 aaKnown RBP23.44■■□□□ 1.34
CALR-205ENST00000587486 ARHGEF25Q86VW2 580 aa23.43■■□□□ 1.34
CALR-205ENST00000587486 SEPT12Q8IYM1 358 aa23.43■■□□□ 1.34
CALR-205ENST00000587486 KCNH5Q8NCM2 988 aa23.42■■□□□ 1.34
CALR-205ENST00000587486 RGPD5Q99666 1765 aa23.42■■□□□ 1.34
CALR-205ENST00000587486 CDCA8Q53HL2 280 aa23.41■■□□□ 1.34
CALR-205ENST00000587486 STRN4Q9NRL3 753 aa23.41■■□□□ 1.34
CALR-205ENST00000587486 LTN1O94822 1766 aa23.41■■□□□ 1.34
CALR-205ENST00000587486 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
CALR-205ENST00000587486 HSPA5P11021 654 aaKnown RBP23.39■■□□□ 1.33
CALR-205ENST00000587486 LARP1Q6PKG0 1096 aaKnown RBP23.39■■□□□ 1.33
CALR-205ENST00000587486 EIF4G2P78344 907 aaKnown RBP eCLIP23.38■■□□□ 1.33
CALR-205ENST00000587486 AXIN2Q9Y2T1 843 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms