RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 USB1Q9BQ65 265 aaKnown RBP8.04□□□□□ -1.12
TUBD1-207ENST00000587476 SALL2Q9Y467 1007 aaPredicted RBP8.04□□□□□ -1.12
TUBD1-207ENST00000587476 TBC1D9Q6ZT07 1266 aa8.03□□□□□ -1.12
TUBD1-207ENST00000587476 FKBPLQ9UIM3 349 aa8.03□□□□□ -1.12
TUBD1-207ENST00000587476 RNF19BQ6ZMZ0 732 aa8.02□□□□□ -1.13
TUBD1-207ENST00000587476 RGS22Q8NE09 1264 aa8.02□□□□□ -1.13
TUBD1-207ENST00000587476 FMNL1O95466 1100 aaPredicted RBP8.01□□□□□ -1.13
TUBD1-207ENST00000587476 FBXO45P0C2W1 286 aa8.01□□□□□ -1.13
TUBD1-207ENST00000587476 CDCA8Q53HL2 280 aa8.01□□□□□ -1.13
TUBD1-207ENST00000587476 B4GALNT3Q6L9W6 998 aa8.01□□□□□ -1.13
TUBD1-207ENST00000587476 BRICD5Q6PL45 260 aa8.01□□□□□ -1.13
TUBD1-207ENST00000587476 BLOC1S3Q6QNY0 202 aa8.01□□□□□ -1.13
TUBD1-207ENST00000587476 NFATC2IPQ8NCF5 419 aa8.01□□□□□ -1.13
TUBD1-207ENST00000587476 VRTNQ9H8Y1 702 aa8.01□□□□□ -1.13
TUBD1-207ENST00000587476 NR1I2O75469 434 aa8□□□□□ -1.13
TUBD1-207ENST00000587476 F12P00748 615 aaPredicted RBP8□□□□□ -1.13
TUBD1-207ENST00000587476 JUNDP17535 347 aa8□□□□□ -1.13
TUBD1-207ENST00000587476 PTPRNQ16849 979 aa8□□□□□ -1.13
TUBD1-207ENST00000587476 ANKK1Q8NFD2 765 aa8□□□□□ -1.13
TUBD1-207ENST00000587476 ZNF592Q92610 1267 aa8□□□□□ -1.13
TUBD1-207ENST00000587476 TMEM88BA6NKF7 163 aa7.99□□□□□ -1.13
TUBD1-207ENST00000587476 GOLGA8CPA6NN73 597 aa7.99□□□□□ -1.13
TUBD1-207ENST00000587476 PPP4CP60510 307 aa7.99□□□□□ -1.13
TUBD1-207ENST00000587476 MTMR7Q9Y216 660 aa7.99□□□□□ -1.13
TUBD1-207ENST00000587476 CARNS1A5YM72 827 aa7.98□□□□□ -1.13
TUBD1-207ENST00000587476 HRO43593 1189 aa7.98□□□□□ -1.13
TUBD1-207ENST00000587476 ELOAQ14241 798 aaKnown RBP7.98□□□□□ -1.13
TUBD1-207ENST00000587476 STAC3Q96MF2 364 aa7.98□□□□□ -1.13
TUBD1-207ENST00000587476 PCDHB3Q9Y5E6 796 aa7.98□□□□□ -1.13
TUBD1-207ENST00000587476 PLEKHM2Q8IWE5 1019 aa7.97□□□□□ -1.13
TUBD1-207ENST00000587476 MAP10Q9P2G4 905 aa7.97□□□□□ -1.13
TUBD1-207ENST00000587476 HPS5Q9UPZ3 1129 aa7.97□□□□□ -1.13
TUBD1-207ENST00000587476 IVNS1ABPQ9Y6Y0 642 aa7.97□□□□□ -1.13
TUBD1-207ENST00000587476 SOWAHBA6NEL2 793 aa7.96□□□□□ -1.14
TUBD1-207ENST00000587476 SKIP12755 728 aa7.96□□□□□ -1.14
TUBD1-207ENST00000587476 CTHP32929 405 aa7.96□□□□□ -1.14
TUBD1-207ENST00000587476 MCCD1P59942 119 aaPredicted RBP7.96□□□□□ -1.14
TUBD1-207ENST00000587476 KANK4Q5T7N3 995 aaPredicted RBP7.96□□□□□ -1.14
TUBD1-207ENST00000587476 SCUBE3Q8IX30 993 aa7.96□□□□□ -1.14
TUBD1-207ENST00000587476 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
TUBD1-207ENST00000587476 GPKOWQ92917 476 aaPredicted RBP eCLIP7.96□□□□□ -1.14
TUBD1-207ENST00000587476 THAP11Q96EK4 314 aa7.96□□□□□ -1.14
TUBD1-207ENST00000587476 TSR3Q9UJK0 312 aaKnown RBP7.96□□□□□ -1.14
TUBD1-207ENST00000587476 GPSM3Q9Y4H4 160 aa7.96□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L3A6NCW0 530 aa7.95□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L4A6NCW7 530 aa7.95□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L5A8MUK1 530 aa7.95□□□□□ -1.14
TUBD1-207ENST00000587476 PIK3CDO00329 1044 aa7.95□□□□□ -1.14
TUBD1-207ENST00000587476 APLP1P51693 650 aa7.95□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L2Q6R6M4 530 aa7.95□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L1Q7RTZ2 530 aa7.95□□□□□ -1.14
TUBD1-207ENST00000587476 CCNYL3P0C7X3 344 aa7.94□□□□□ -1.14
TUBD1-207ENST00000587476 PTK2Q05397 1052 aa7.94□□□□□ -1.14
TUBD1-207ENST00000587476 CCDC27Q2M243 656 aa7.94□□□□□ -1.14
TUBD1-207ENST00000587476 MSS51Q4VC12 460 aa7.94□□□□□ -1.14
TUBD1-207ENST00000587476 NBPF14Q5TI25 921 aa7.94□□□□□ -1.14
TUBD1-207ENST00000587476 SND1Q7KZF4 910 aaKnown RBP eCLIP7.94□□□□□ -1.14
TUBD1-207ENST00000587476 NOVA2Q9UNW9 492 aaKnown RBP7.94□□□□□ -1.14
TUBD1-207ENST00000587476 SLFNL1Q499Z3 407 aa7.93□□□□□ -1.14
TUBD1-207ENST00000587476 PDXDC2PQ6P474 469 aa7.93□□□□□ -1.14
TUBD1-207ENST00000587476 ZMIZ1Q9ULJ6 1067 aa7.93□□□□□ -1.14
TUBD1-207ENST00000587476 GNEQ9Y223 722 aaKnown RBP7.93□□□□□ -1.14
TUBD1-207ENST00000587476 FAM196BA6NMK8 535 aa7.92□□□□□ -1.14
TUBD1-207ENST00000587476 LZTS3O60299 673 aaPredicted RBP7.92□□□□□ -1.14
TUBD1-207ENST00000587476 BCAMP50895 628 aa7.92□□□□□ -1.14
TUBD1-207ENST00000587476 TMEM164Q5U3C3 297 aa7.92□□□□□ -1.14
TUBD1-207ENST00000587476 NUDT12Q9BQG2 462 aa7.92□□□□□ -1.14
TUBD1-207ENST00000587476 DXOO77932 396 aaKnown RBP7.91□□□□□ -1.14
TUBD1-207ENST00000587476 KCNH2Q12809 1159 aa7.91□□□□□ -1.14
TUBD1-207ENST00000587476 FOXD4L5Q5VV16 416 aaPredicted RBP7.91□□□□□ -1.14
TUBD1-207ENST00000587476 LARP1Q6PKG0 1096 aaKnown RBP7.91□□□□□ -1.14
TUBD1-207ENST00000587476 FAM174AQ8TBP5 190 aa7.91□□□□□ -1.14
TUBD1-207ENST00000587476 STK32AQ8WU08 396 aa7.91□□□□□ -1.14
TUBD1-207ENST00000587476 FOXD4L4Q8WXT5 416 aaPredicted RBP7.91□□□□□ -1.14
TUBD1-207ENST00000587476 WNT2BQ93097 391 aa7.91□□□□□ -1.14
TUBD1-207ENST00000587476 KCTD12Q96CX2 325 aaKnown RBP7.91□□□□□ -1.14
TUBD1-207ENST00000587476 EVA1BQ9NVM1 165 aa7.91□□□□□ -1.14
TUBD1-207ENST00000587476 PCDHB9Q9Y5E1 797 aa7.91□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L15C9J2P7 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L10C9JJH3 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L13C9JLJ4 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L12C9JPN9 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L11C9JVI0 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L21D6R901 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L18D6R9N7 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L22D6RA61 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L17D6RBQ6 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L19D6RCP7 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L20D6RJB6 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 ATP5J2-PTCD1G3V325 749 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 USP17L24Q0WX57 530 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 RNF135Q8IUD6 432 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 CCER1Q8TC90 406 aaPredicted RBP7.9□□□□□ -1.14
TUBD1-207ENST00000587476 SPSB2Q99619 263 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 CEP126Q9P2H0 1117 aa7.9□□□□□ -1.14
TUBD1-207ENST00000587476 MKRN1Q9UHC7 482 aaKnown RBP7.9□□□□□ -1.14
TUBD1-207ENST00000587476 MMP16P51512 607 aa7.89□□□□□ -1.15
TUBD1-207ENST00000587476 DEPDC4Q8N2C3 294 aa7.89□□□□□ -1.15
TUBD1-207ENST00000587476 RBM25P49756 843 aaKnown RBP7.88□□□□□ -1.15
TUBD1-207ENST00000587476 NCOA4Q13772 614 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms