RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 ZKSCAN2Q63HK3 967 aa18.27■□□□□ 0.52
MBD1-212ENST00000585672 CHAMP1Q96JM3 812 aa18.27■□□□□ 0.52
MBD1-212ENST00000585672 LNPKQ9C0E8 428 aa18.27■□□□□ 0.52
MBD1-212ENST00000585672 CROCC2H7BZ55 1655 aa18.27■□□□□ 0.52
MBD1-212ENST00000585672 ITSN2Q9NZM3 1697 aa18.27■□□□□ 0.52
MBD1-212ENST00000585672 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.52
MBD1-212ENST00000585672 NUCB1Q02818 461 aa18.27■□□□□ 0.52
MBD1-212ENST00000585672 SPTLC3Q9NUV7 552 aa18.27■□□□□ 0.52
MBD1-212ENST00000585672 FEZ1Q99689 392 aa18.26■□□□□ 0.51
MBD1-212ENST00000585672 PTPRGP23470 1445 aa18.26■□□□□ 0.51
MBD1-212ENST00000585672 BMP2KLQ5H9B9 411 aa18.26■□□□□ 0.51
MBD1-212ENST00000585672 NPC1L1Q9UHC9 1359 aa18.26■□□□□ 0.51
MBD1-212ENST00000585672 TTC12Q9H892 705 aaPredicted RBP18.25■□□□□ 0.51
MBD1-212ENST00000585672 OGFRQ9NZT2 677 aa18.25■□□□□ 0.51
MBD1-212ENST00000585672 TDRD9Q8NDG6 1382 aaKnown RBP18.25■□□□□ 0.51
MBD1-212ENST00000585672 TBC1D9Q6ZT07 1266 aa18.25■□□□□ 0.51
MBD1-212ENST00000585672 ERCC6Q03468 1493 aa18.25■□□□□ 0.51
MBD1-212ENST00000585672 RIOK3O14730 519 aaKnown RBP18.24■□□□□ 0.51
MBD1-212ENST00000585672 SLFN14P0C7P3 912 aa18.24■□□□□ 0.51
MBD1-212ENST00000585672 ZDHHC9Q9Y397 364 aa18.24■□□□□ 0.51
MBD1-212ENST00000585672 PHF23Q9BUL5 403 aaPredicted RBP18.23■□□□□ 0.51
MBD1-212ENST00000585672 GABPB1Q06547 395 aaPredicted RBP18.23■□□□□ 0.51
MBD1-212ENST00000585672 TSPY26PQ9H489 355 aa18.23■□□□□ 0.51
MBD1-212ENST00000585672 SLC20A2Q08357 652 aa18.22■□□□□ 0.51
MBD1-212ENST00000585672 CHD1LQ86WJ1 897 aa18.22■□□□□ 0.51
MBD1-212ENST00000585672 ITPRIPQ8IWB1 547 aa18.22■□□□□ 0.51
MBD1-212ENST00000585672 SYNMO15061 1565 aa18.22■□□□□ 0.51
MBD1-212ENST00000585672 WDR63Q8IWG1 891 aa18.22■□□□□ 0.51
MBD1-212ENST00000585672 GPATCH8Q9UKJ3 1502 aaKnown RBP18.22■□□□□ 0.51
MBD1-212ENST00000585672 TRIM27P14373 513 aa18.21■□□□□ 0.51
MBD1-212ENST00000585672 CDCA8Q53HL2 280 aa18.21■□□□□ 0.51
MBD1-212ENST00000585672 CTIFO43310 598 aaKnown RBP18.21■□□□□ 0.51
MBD1-212ENST00000585672 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.51
MBD1-212ENST00000585672 DDX19BQ9UMR2 479 aa18.21■□□□□ 0.51
MBD1-212ENST00000585672 ADCY10Q96PN6 1610 aa18.21■□□□□ 0.5
MBD1-212ENST00000585672 ZGPATQ8N5A5 531 aaKnown RBP18.2■□□□□ 0.5
MBD1-212ENST00000585672 DNAJC2Q99543 621 aaKnown RBP18.19■□□□□ 0.5
MBD1-212ENST00000585672 PRG4Q92954 1404 aaPredicted RBP18.18■□□□□ 0.5
MBD1-212ENST00000585672 RABEP1Q15276 862 aa18.18■□□□□ 0.5
MBD1-212ENST00000585672 CWC22Q9HCG8 908 aaKnown RBP18.18■□□□□ 0.5
MBD1-212ENST00000585672 DIAPH3Q9NSV4 1193 aa18.18■□□□□ 0.5
MBD1-212ENST00000585672 VGFO15240 615 aaPredicted RBP18.18■□□□□ 0.5
MBD1-212ENST00000585672 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
MBD1-212ENST00000585672 CHMP4AQ9BY43 222 aa18.18■□□□□ 0.5
MBD1-212ENST00000585672 ZBTB40Q9NUA8 1239 aa18.18■□□□□ 0.5
MBD1-212ENST00000585672 CCDC141Q6ZP82 1450 aa18.18■□□□□ 0.5
MBD1-212ENST00000585672 MBD3O95983 291 aa18.17■□□□□ 0.5
MBD1-212ENST00000585672 CTNNA3Q9UI47 895 aa18.17■□□□□ 0.5
MBD1-212ENST00000585672 NUP153P49790 1475 aaKnown RBP18.17■□□□□ 0.5
MBD1-212ENST00000585672 PLA2R1Q13018 1463 aa18.17■□□□□ 0.5
MBD1-212ENST00000585672 EIF2AK4Q9P2K8 1649 aaKnown RBP18.17■□□□□ 0.5
MBD1-212ENST00000585672 USP25Q9UHP3 1055 aa18.17■□□□□ 0.5
MBD1-212ENST00000585672 KANK1Q14678 1352 aa18.17■□□□□ 0.5
MBD1-212ENST00000585672 C9orf84Q5VXU9 1444 aa18.17■□□□□ 0.5
MBD1-212ENST00000585672 TIGD1Q96MW7 591 aa18.16■□□□□ 0.5
MBD1-212ENST00000585672 CFAP74Q9C0B2 1584 aa18.16■□□□□ 0.5
MBD1-212ENST00000585672 CCDC66A2RUB6 948 aa18.16■□□□□ 0.5
MBD1-212ENST00000585672 NCBP1Q09161 790 aaKnown RBP18.16■□□□□ 0.5
MBD1-212ENST00000585672 NUP160Q12769 1436 aa18.16■□□□□ 0.5
MBD1-212ENST00000585672 IQSEC2Q5JU85 1478 aa18.16■□□□□ 0.5
MBD1-212ENST00000585672 CAPN2P17655 700 aa18.15■□□□□ 0.5
MBD1-212ENST00000585672 SMC4Q9NTJ3 1288 aa18.15■□□□□ 0.5
MBD1-212ENST00000585672 POLR3AO14802 1390 aaPredicted RBP18.15■□□□□ 0.5
MBD1-212ENST00000585672 ADCY5O95622 1261 aa18.15■□□□□ 0.5
MBD1-212ENST00000585672 TERF2Q15554 542 aa18.15■□□□□ 0.5
MBD1-212ENST00000585672 TMEM57Q8N5G2 664 aa18.15■□□□□ 0.5
MBD1-212ENST00000585672 CHAF1AQ13111 956 aaPredicted RBP18.14■□□□□ 0.49
MBD1-212ENST00000585672 DDX41Q9UJV9 622 aaKnown RBP18.14■□□□□ 0.49
MBD1-212ENST00000585672 TULP2O00295 520 aa18.14■□□□□ 0.49
MBD1-212ENST00000585672 FOXD4L5Q5VV16 416 aaPredicted RBP18.14■□□□□ 0.49
MBD1-212ENST00000585672 FOXD4L4Q8WXT5 416 aaPredicted RBP18.14■□□□□ 0.49
MBD1-212ENST00000585672 IQGAP2Q13576 1575 aa18.14■□□□□ 0.49
MBD1-212ENST00000585672 ATF7IPQ6VMQ6 1270 aa18.13■□□□□ 0.49
MBD1-212ENST00000585672 KIAA1524Q8TCG1 905 aa18.13■□□□□ 0.49
MBD1-212ENST00000585672 ZFP91Q96JP5 570 aaPredicted RBP18.13■□□□□ 0.49
MBD1-212ENST00000585672 ANKRD45Q5TZF3 282 aa18.13■□□□□ 0.49
MBD1-212ENST00000585672 MYOM1P52179 1685 aa18.12■□□□□ 0.49
MBD1-212ENST00000585672 IRX3P78415 501 aaPredicted RBP18.12■□□□□ 0.49
MBD1-212ENST00000585672 UVSSAQ2YD98 709 aa18.12■□□□□ 0.49
MBD1-212ENST00000585672 TROQ12816 1431 aaPredicted RBP18.12■□□□□ 0.49
MBD1-212ENST00000585672 CERS3Q8IU89 383 aa18.12■□□□□ 0.49
MBD1-212ENST00000585672 PYCARDQ9ULZ3 195 aa18.12■□□□□ 0.49
MBD1-212ENST00000585672 MORC2Q9Y6X9 1032 aaPredicted RBP18.12■□□□□ 0.49
MBD1-212ENST00000585672 RNF17Q9BXT8 1623 aaKnown RBP18.11■□□□□ 0.49
MBD1-212ENST00000585672 CCDC27Q2M243 656 aa18.11■□□□□ 0.49
MBD1-212ENST00000585672 SSH1Q8WYL5 1049 aa18.11■□□□□ 0.49
MBD1-212ENST00000585672 CARD14Q9BXL6 1004 aa18.11■□□□□ 0.49
MBD1-212ENST00000585672 NOB1Q9ULX3 412 aaKnown RBP18.11■□□□□ 0.49
MBD1-212ENST00000585672 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
MBD1-212ENST00000585672 PBRM1Q86U86 1689 aa18.1■□□□□ 0.49
MBD1-212ENST00000585672 CDC45O75419 566 aa18.1■□□□□ 0.49
MBD1-212ENST00000585672 TSR2Q969E8 191 aaKnown RBP18.1■□□□□ 0.49
MBD1-212ENST00000585672 SHANK2Q9UPX8 1470 aa18.1■□□□□ 0.49
MBD1-212ENST00000585672 MYO5CQ9NQX4 1742 aa18.1■□□□□ 0.49
MBD1-212ENST00000585672 FAM184AQ8NB25 1140 aa18.1■□□□□ 0.49
MBD1-212ENST00000585672 KCNF1Q9H3M0 494 aa18.1■□□□□ 0.49
MBD1-212ENST00000585672 SYNJ2O15056 1496 aa18.08■□□□□ 0.49
MBD1-212ENST00000585672 TRIM6-TRIM34B2RNG4 842 aa18.08■□□□□ 0.48
MBD1-212ENST00000585672 TEX2Q8IWB9 1127 aa18.08■□□□□ 0.48
MBD1-212ENST00000585672 SYAP1Q96A49 352 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms