RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 MPHOSPH9Q99550 1183 aa27.13■■□□□ 1.93
TOP3A-220ENST00000585031 DHX57Q6P158 1386 aaKnown RBP27.11■■□□□ 1.93
TOP3A-220ENST00000585031 PRR36Q9H6K5 1346 aa27.1■■□□□ 1.93
TOP3A-220ENST00000585031 ANKARQ7Z5J8 1434 aa27.09■■□□□ 1.93
TOP3A-220ENST00000585031 ADGRB2O60241 1585 aa27.07■■□□□ 1.92
TOP3A-220ENST00000585031 HIRIP3Q9BW71 556 aaPredicted RBP27.07■■□□□ 1.92
TOP3A-220ENST00000585031 DLC1Q96QB1 1528 aa27.06■■□□□ 1.92
TOP3A-220ENST00000585031 ACIN1Q9UKV3 1341 aaKnown RBP27.05■■□□□ 1.92
TOP3A-220ENST00000585031 TRIM37O94972 964 aa27.04■■□□□ 1.92
TOP3A-220ENST00000585031 FAM196AQ6ZSG2 479 aa27.03■■□□□ 1.92
TOP3A-220ENST00000585031 POGKQ9P215 609 aa27.03■■□□□ 1.92
TOP3A-220ENST00000585031 ADGRB1O14514 1584 aa27.01■■□□□ 1.92
TOP3A-220ENST00000585031 PARD3Q8TEW0 1356 aa27.01■■□□□ 1.91
TOP3A-220ENST00000585031 SPATA31A1Q5TZJ5 1347 aa27.01■■□□□ 1.91
TOP3A-220ENST00000585031 APBA3O96018 575 aa27■■□□□ 1.91
TOP3A-220ENST00000585031 RREB1Q92766 1687 aa27■■□□□ 1.91
TOP3A-220ENST00000585031 GPRASP1Q5JY77 1395 aa26.99■■□□□ 1.91
TOP3A-220ENST00000585031 MINK1Q8N4C8 1332 aaPredicted RBP26.99■■□□□ 1.91
TOP3A-220ENST00000585031 CHRNA2Q15822 529 aa26.99■■□□□ 1.91
TOP3A-220ENST00000585031 PRDM11Q9NQV5 511 aa26.99■■□□□ 1.91
TOP3A-220ENST00000585031 TRAK1Q9UPV9 953 aa26.98■■□□□ 1.91
TOP3A-220ENST00000585031 NUP188Q5SRE5 1749 aa26.98■■□□□ 1.91
TOP3A-220ENST00000585031 TULP4Q9NRJ4 1543 aa26.97■■□□□ 1.91
TOP3A-220ENST00000585031 KIAA0232Q92628 1395 aa26.97■■□□□ 1.91
TOP3A-220ENST00000585031 PAK3O75914 559 aaPredicted RBP26.95■■□□□ 1.9
TOP3A-220ENST00000585031 PHRF1Q9P1Y6 1649 aaKnown RBP26.94■■□□□ 1.9
TOP3A-220ENST00000585031 WASLO00401 505 aaPredicted RBP26.93■■□□□ 1.9
TOP3A-220ENST00000585031 STRN4Q9NRL3 753 aa26.93■■□□□ 1.9
TOP3A-220ENST00000585031 NBPF8Q3BBV2 869 aa26.92■■□□□ 1.9
TOP3A-220ENST00000585031 NBPF14Q5TI25 921 aa26.92■■□□□ 1.9
TOP3A-220ENST00000585031 NGDNQ8NEJ9 315 aaKnown RBP26.92■■□□□ 1.9
TOP3A-220ENST00000585031 ZC3H6P61129 1189 aaKnown RBP26.9■■□□□ 1.9
TOP3A-220ENST00000585031 SPON1Q9HCB6 807 aa26.9■■□□□ 1.9
TOP3A-220ENST00000585031 USP35Q9P2H5 1018 aa26.89■■□□□ 1.9
TOP3A-220ENST00000585031 KCNQ2O43526 872 aa26.88■■□□□ 1.89
TOP3A-220ENST00000585031 NUTM2GQ5VZR2 741 aa26.88■■□□□ 1.89
TOP3A-220ENST00000585031 BARGINQ6ZT62 677 aa26.87■■□□□ 1.89
TOP3A-220ENST00000585031 CAMTA1Q9Y6Y1 1673 aa26.85■■□□□ 1.89
TOP3A-220ENST00000585031 NINLQ9Y2I6 1382 aa26.85■■□□□ 1.89
TOP3A-220ENST00000585031 DCAF8L1A6NGE4 600 aa26.85■■□□□ 1.89
TOP3A-220ENST00000585031 PPP1R1BQ9UD71 204 aaPredicted RBP26.85■■□□□ 1.89
TOP3A-220ENST00000585031 ATP7BP35670 1465 aa26.85■■□□□ 1.89
TOP3A-220ENST00000585031 EIF3AQ14152 1382 aaKnown RBP26.84■■□□□ 1.89
TOP3A-220ENST00000585031 SSH2Q76I76 1423 aa26.84■■□□□ 1.89
TOP3A-220ENST00000585031 PDE3BQ13370 1112 aa26.84■■□□□ 1.89
TOP3A-220ENST00000585031 ITSN1Q15811 1721 aa26.84■■□□□ 1.89
TOP3A-220ENST00000585031 LARP1Q6PKG0 1096 aaKnown RBP26.83■■□□□ 1.89
TOP3A-220ENST00000585031 NUDT16Q96DE0 195 aaKnown RBP26.83■■□□□ 1.89
TOP3A-220ENST00000585031 ARHGEF28Q8N1W1 1705 aaKnown RBP26.82■■□□□ 1.88
TOP3A-220ENST00000585031 LMO7Q8WWI1 1683 aa26.81■■□□□ 1.88
TOP3A-220ENST00000585031 UTRNP46939 3433 aa26.81■■□□□ 1.88
TOP3A-220ENST00000585031 KDM2AQ9Y2K7 1162 aa26.8■■□□□ 1.88
TOP3A-220ENST00000585031 NRKQ7Z2Y5 1582 aa26.79■■□□□ 1.88
TOP3A-220ENST00000585031 EVA1CP58658 441 aa26.78■■□□□ 1.88
TOP3A-220ENST00000585031 TOPAZ1Q8N9V7 1692 aa26.76■■□□□ 1.87
TOP3A-220ENST00000585031 SBF2Q86WG5 1849 aa26.75■■□□□ 1.87
TOP3A-220ENST00000585031 TCP11L2Q8N4U5 519 aa26.75■■□□□ 1.87
TOP3A-220ENST00000585031 PEAK1Q9H792 1746 aa26.75■■□□□ 1.87
TOP3A-220ENST00000585031 PARP4Q9UKK3 1724 aaKnown RBP26.75■■□□□ 1.87
TOP3A-220ENST00000585031 POLR3AO14802 1390 aaPredicted RBP26.74■■□□□ 1.87
TOP3A-220ENST00000585031 ACEP12821 1306 aa26.74■■□□□ 1.87
TOP3A-220ENST00000585031 DCAF11Q8TEB1 546 aa26.74■■□□□ 1.87
TOP3A-220ENST00000585031 ZNF784Q8NCA9 323 aaPredicted RBP26.73■■□□□ 1.87
TOP3A-220ENST00000585031 CDK19Q9BWU1 502 aa26.73■■□□□ 1.87
TOP3A-220ENST00000585031 PDGFDQ9GZP0 370 aaPredicted RBP26.72■■□□□ 1.87
TOP3A-220ENST00000585031 CASZ1Q86V15 1759 aa26.71■■□□□ 1.87
TOP3A-220ENST00000585031 C11orf95C9JLR9 678 aaPredicted RBP26.71■■□□□ 1.87
TOP3A-220ENST00000585031 PLSCR1O15162 318 aa26.71■■□□□ 1.87
TOP3A-220ENST00000585031 PTF1AQ7RTS3 328 aa26.71■■□□□ 1.87
TOP3A-220ENST00000585031 ANO8Q9HCE9 1232 aaPredicted RBP26.71■■□□□ 1.87
TOP3A-220ENST00000585031 THRAP3Q9Y2W1 955 aaKnown RBP26.71■■□□□ 1.87
TOP3A-220ENST00000585031 CPDO75976 1380 aa26.71■■□□□ 1.87
TOP3A-220ENST00000585031 USP19O94966 1318 aa26.69■■□□□ 1.86
TOP3A-220ENST00000585031 PLEKHG3A1L390 1219 aa26.67■■□□□ 1.86
TOP3A-220ENST00000585031 ABTB2Q8N961 1025 aa26.67■■□□□ 1.86
TOP3A-220ENST00000585031 COL5A2P05997 1499 aaPredicted RBP26.67■■□□□ 1.86
TOP3A-220ENST00000585031 RGPD3A6NKT7 1758 aaPredicted RBP26.66■■□□□ 1.86
TOP3A-220ENST00000585031 RGPD4Q7Z3J3 1758 aa26.66■■□□□ 1.86
TOP3A-220ENST00000585031 GCP02774 474 aa26.64■■□□□ 1.86
TOP3A-220ENST00000585031 PROM2Q8N271 834 aa26.64■■□□□ 1.86
TOP3A-220ENST00000585031 CCDC61Q9Y6R9 512 aa26.64■■□□□ 1.86
TOP3A-220ENST00000585031 PTGER2P43116 358 aa26.63■■□□□ 1.85
TOP3A-220ENST00000585031 LRRC37A3O60309 1634 aa26.63■■□□□ 1.85
TOP3A-220ENST00000585031 RAB3GAP2Q9H2M9 1393 aa26.61■■□□□ 1.85
TOP3A-220ENST00000585031 MYOM1P52179 1685 aa26.61■■□□□ 1.85
TOP3A-220ENST00000585031 OVOS2A0A0G2JMS6 1433 aa26.6■■□□□ 1.85
TOP3A-220ENST00000585031 OVOS2A0A0J9YW53 1432 aa26.6■■□□□ 1.85
TOP3A-220ENST00000585031 CRB1P82279 1406 aa26.6■■□□□ 1.85
TOP3A-220ENST00000585031 OVOS2Q6IE36 1432 aa26.6■■□□□ 1.85
TOP3A-220ENST00000585031 COL18A1P39060 1754 aa26.58■■□□□ 1.85
TOP3A-220ENST00000585031 ZBTB7AO95365 584 aa26.58■■□□□ 1.85
TOP3A-220ENST00000585031 BCL11BQ9C0K0 894 aaPredicted RBP26.58■■□□□ 1.85
TOP3A-220ENST00000585031 SENP3-EIF4A1A0A087X0R7 540 aa26.57■■□□□ 1.84
TOP3A-220ENST00000585031 C1QTNF8P60827 252 aa26.57■■□□□ 1.84
TOP3A-220ENST00000585031 SYT17Q9BSW7 474 aa26.57■■□□□ 1.84
TOP3A-220ENST00000585031 WNK3Q9BYP7 1800 aa26.56■■□□□ 1.84
TOP3A-220ENST00000585031 NLRP13Q86W25 1043 aa26.56■■□□□ 1.84
TOP3A-220ENST00000585031 IFFO2Q5TF58 517 aa26.55■■□□□ 1.84
TOP3A-220ENST00000585031 ZBTB7CA1YPR0 619 aa26.54■■□□□ 1.84
TOP3A-220ENST00000585031 MARCH10Q8NA82 808 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms