RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 AK7Q96M32 723 aa9.61□□□□□ -0.87
PRKCA-205ENST00000583775 PRXQ9BXM0 1461 aa9.6□□□□□ -0.87
PRKCA-205ENST00000583775 MINK1Q8N4C8 1332 aaPredicted RBP9.59□□□□□ -0.87
PRKCA-205ENST00000583775 KIF27Q86VH2 1401 aa9.59□□□□□ -0.87
PRKCA-205ENST00000583775 TRIM66O15016 1216 aa9.59□□□□□ -0.87
PRKCA-205ENST00000583775 SIAH2O43255 324 aa9.59□□□□□ -0.87
PRKCA-205ENST00000583775 MAP2K5Q13163 448 aa9.59□□□□□ -0.87
PRKCA-205ENST00000583775 PCGF6Q9BYE7 350 aa9.59□□□□□ -0.87
PRKCA-205ENST00000583775 NEUROD2Q15784 382 aa9.58□□□□□ -0.88
PRKCA-205ENST00000583775 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
PRKCA-205ENST00000583775 FANCD2Q9BXW9 1451 aa9.58□□□□□ -0.88
PRKCA-205ENST00000583775 KDM4AO75164 1064 aa9.57□□□□□ -0.88
PRKCA-205ENST00000583775 DNMBPQ6XZF7 1577 aa9.57□□□□□ -0.88
PRKCA-205ENST00000583775 HRCP23327 699 aa9.56□□□□□ -0.88
PRKCA-205ENST00000583775 HLA-CQ95604 372 aa9.56□□□□□ -0.88
PRKCA-205ENST00000583775 BRPF1P55201 1214 aaPredicted RBP9.55□□□□□ -0.88
PRKCA-205ENST00000583775 NPAS3Q8IXF0 933 aa9.55□□□□□ -0.88
PRKCA-205ENST00000583775 NXF1Q9UBU9 619 aaKnown RBP9.55□□□□□ -0.88
PRKCA-205ENST00000583775 RAPGEF2Q9Y4G8 1499 aa9.54□□□□□ -0.88
PRKCA-205ENST00000583775 LOC100996750A0A140TA64 210 aa9.54□□□□□ -0.88
PRKCA-205ENST00000583775 TRIM46Q7Z4K8 759 aa9.54□□□□□ -0.88
PRKCA-205ENST00000583775 KRTAP4-6Q9BYQ5 205 aa9.54□□□□□ -0.88
PRKCA-205ENST00000583775 GMPRP36959 345 aa9.53□□□□□ -0.88
PRKCA-205ENST00000583775 USP46P62068 366 aa9.53□□□□□ -0.88
PRKCA-205ENST00000583775 PDE4DQ08499 809 aa9.53□□□□□ -0.88
PRKCA-205ENST00000583775 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
PRKCA-205ENST00000583775 UBTFP17480 764 aaKnown RBP9.52□□□□□ -0.89
PRKCA-205ENST00000583775 TOPBP1Q92547 1522 aa9.51□□□□□ -0.89
PRKCA-205ENST00000583775 HOXA2O43364 376 aa9.51□□□□□ -0.89
PRKCA-205ENST00000583775 ALDH1A1P00352 501 aa9.51□□□□□ -0.89
PRKCA-205ENST00000583775 PTCRAQ6ISU1 281 aaPredicted RBP9.51□□□□□ -0.89
PRKCA-205ENST00000583775 CCDC24Q8N4L8 307 aa9.51□□□□□ -0.89
PRKCA-205ENST00000583775 SLC16A10Q8TF71 515 aa9.51□□□□□ -0.89
PRKCA-205ENST00000583775 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
PRKCA-205ENST00000583775 CLIP1P30622 1438 aa9.5□□□□□ -0.89
PRKCA-205ENST00000583775 PDS5BQ9NTI5 1447 aa9.5□□□□□ -0.89
PRKCA-205ENST00000583775 JUNDP17535 347 aa9.5□□□□□ -0.89
PRKCA-205ENST00000583775 MDM2Q00987 491 aaPredicted RBP9.5□□□□□ -0.89
PRKCA-205ENST00000583775 H3BM21 787 aa9.49□□□□□ -0.89
PRKCA-205ENST00000583775 TTLL12Q14166 644 aaPredicted RBP9.49□□□□□ -0.89
PRKCA-205ENST00000583775 WDR97A6NE52 1622 aa9.49□□□□□ -0.89
PRKCA-205ENST00000583775 IGF1RP08069 1367 aa9.49□□□□□ -0.89
PRKCA-205ENST00000583775 NESP48681 1621 aa9.49□□□□□ -0.89
PRKCA-205ENST00000583775 CUX2O14529 1486 aa9.48□□□□□ -0.89
PRKCA-205ENST00000583775 BMP1P13497 986 aa9.48□□□□□ -0.89
PRKCA-205ENST00000583775 ZSCAN1Q8NBB4 408 aa9.48□□□□□ -0.89
PRKCA-205ENST00000583775 VPS8Q8N3P4 1428 aa9.48□□□□□ -0.89
PRKCA-205ENST00000583775 GUCA2AQ02747 115 aa9.47□□□□□ -0.89
PRKCA-205ENST00000583775 IL27Q8NEV9 243 aa9.47□□□□□ -0.89
PRKCA-205ENST00000583775 SYMPKQ92797 1274 aaKnown RBP9.47□□□□□ -0.89
PRKCA-205ENST00000583775 IRF7Q92985 503 aa9.47□□□□□ -0.89
PRKCA-205ENST00000583775 KDM4CQ9H3R0 1056 aa9.47□□□□□ -0.89
PRKCA-205ENST00000583775 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
PRKCA-205ENST00000583775 POLA1P09884 1462 aaPredicted RBP9.47□□□□□ -0.89
PRKCA-205ENST00000583775 FAM181BA6NEQ2 426 aa9.46□□□□□ -0.9
PRKCA-205ENST00000583775 URB2Q14146 1524 aaKnown RBP9.46□□□□□ -0.9
PRKCA-205ENST00000583775 CUL7Q14999 1698 aa9.45□□□□□ -0.9
PRKCA-205ENST00000583775 CAPN5O15484 640 aaPredicted RBP9.45□□□□□ -0.9
PRKCA-205ENST00000583775 PARP9Q8IXQ6 854 aa9.45□□□□□ -0.9
PRKCA-205ENST00000583775 SH3BP2P78314 561 aa9.44□□□□□ -0.9
PRKCA-205ENST00000583775 NUDT12Q9BQG2 462 aa9.44□□□□□ -0.9
PRKCA-205ENST00000583775 KIF21AQ7Z4S6 1674 aa9.44□□□□□ -0.9
PRKCA-205ENST00000583775 AMHR2Q16671 573 aa9.43□□□□□ -0.9
PRKCA-205ENST00000583775 RETREG3Q86VR2 466 aa9.43□□□□□ -0.9
PRKCA-205ENST00000583775 EHBP1Q8NDI1 1231 aa9.43□□□□□ -0.9
PRKCA-205ENST00000583775 CARMIL1Q5VZK9 1371 aa9.42□□□□□ -0.9
PRKCA-205ENST00000583775 VEGFBP49765 207 aa9.42□□□□□ -0.9
PRKCA-205ENST00000583775 FAM117AQ9C073 453 aa9.42□□□□□ -0.9
PRKCA-205ENST00000583775 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
PRKCA-205ENST00000583775 MS4A1P11836 297 aa9.41□□□□□ -0.9
PRKCA-205ENST00000583775 ZEB1P37275 1124 aaPredicted RBP9.41□□□□□ -0.9
PRKCA-205ENST00000583775 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
PRKCA-205ENST00000583775 ZFP42Q96MM3 310 aa9.41□□□□□ -0.9
PRKCA-205ENST00000583775 PCDHGC3Q9UN70 934 aa9.41□□□□□ -0.9
PRKCA-205ENST00000583775 ARAP1Q96P48 1450 aa9.4□□□□□ -0.9
PRKCA-205ENST00000583775 MPNDQ8N594 471 aa9.4□□□□□ -0.9
PRKCA-205ENST00000583775 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.9
PRKCA-205ENST00000583775 TARBP1Q13395 1621 aaKnown RBP9.39□□□□□ -0.91
PRKCA-205ENST00000583775 VSIG8P0DPA2 414 aa9.39□□□□□ -0.91
PRKCA-205ENST00000583775 SSTR3P32745 418 aaPredicted RBP9.39□□□□□ -0.91
PRKCA-205ENST00000583775 GPCPD1Q9NPB8 672 aa9.39□□□□□ -0.91
PRKCA-205ENST00000583775 WASF2Q9Y6W5 498 aa9.39□□□□□ -0.91
PRKCA-205ENST00000583775 MAP3K1Q13233 1512 aa9.38□□□□□ -0.91
PRKCA-205ENST00000583775 CLCN1P35523 988 aa9.38□□□□□ -0.91
PRKCA-205ENST00000583775 KLF16Q9BXK1 252 aaPredicted RBP9.38□□□□□ -0.91
PRKCA-205ENST00000583775 EVA1BQ9NVM1 165 aa9.38□□□□□ -0.91
PRKCA-205ENST00000583775 RAD54L2Q9Y4B4 1467 aa9.38□□□□□ -0.91
PRKCA-205ENST00000583775 CTTNBP2Q8WZ74 1663 aa9.37□□□□□ -0.91
PRKCA-205ENST00000583775 ARHGAP35Q9NRY4 1499 aa9.37□□□□□ -0.91
PRKCA-205ENST00000583775 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
PRKCA-205ENST00000583775 CCNYL3P0C7X3 344 aa9.36□□□□□ -0.91
PRKCA-205ENST00000583775 GSK3AP49840 483 aa9.35□□□□□ -0.91
PRKCA-205ENST00000583775 PTPRNQ16849 979 aa9.35□□□□□ -0.91
PRKCA-205ENST00000583775 EFCAB5A4FU69 1503 aa9.35□□□□□ -0.91
PRKCA-205ENST00000583775 UNC93B1Q9H1C4 597 aa9.34□□□□□ -0.91
PRKCA-205ENST00000583775 TLL2Q9Y6L7 1015 aa9.34□□□□□ -0.91
PRKCA-205ENST00000583775 WDR62O43379 1518 aa9.34□□□□□ -0.91
PRKCA-205ENST00000583775 GAPVD1Q14C86 1478 aa9.34□□□□□ -0.91
PRKCA-205ENST00000583775 PLEKHG3A1L390 1219 aa9.33□□□□□ -0.92
PRKCA-205ENST00000583775 FDX1P10109 184 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms