RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 RGPD8O14715 1765 aaPredicted RBP14.09□□□□□ -0.15
GGA3-212ENST00000582376 KNDC1Q76NI1 1749 aa14.08□□□□□ -0.16
GGA3-212ENST00000582376 PRDM11Q9NQV5 511 aa14.08□□□□□ -0.16
GGA3-212ENST00000582376 IFT172Q9UG01 1749 aa14.07□□□□□ -0.16
GGA3-212ENST00000582376 TMEM132EQ6IEE7 984 aa14.07□□□□□ -0.16
GGA3-212ENST00000582376 PMFBP1Q8TBY8 1022 aa14.07□□□□□ -0.16
GGA3-212ENST00000582376 ADGRF5Q8IZF2 1346 aa14.07□□□□□ -0.16
GGA3-212ENST00000582376 CHD4Q14839 1912 aa14.06□□□□□ -0.16
GGA3-212ENST00000582376 GIGYF1O75420 1035 aaPredicted RBP14.06□□□□□ -0.16
GGA3-212ENST00000582376 ITGAEP38570 1179 aa14.06□□□□□ -0.16
GGA3-212ENST00000582376 STRN4Q9NRL3 753 aa14.05□□□□□ -0.16
GGA3-212ENST00000582376 ZBTB7AO95365 584 aa14.04□□□□□ -0.16
GGA3-212ENST00000582376 BARGINQ6ZT62 677 aa14.04□□□□□ -0.16
GGA3-212ENST00000582376 SIRT1Q96EB6 747 aa14.04□□□□□ -0.16
GGA3-212ENST00000582376 SYT17Q9BSW7 474 aa14.04□□□□□ -0.16
GGA3-212ENST00000582376 USP35Q9P2H5 1018 aa14.04□□□□□ -0.16
GGA3-212ENST00000582376 GPRASP1Q5JY77 1395 aa14.04□□□□□ -0.16
GGA3-212ENST00000582376 YTHDC2Q9H6S0 1430 aaKnown RBP14.04□□□□□ -0.16
GGA3-212ENST00000582376 MYOM1P52179 1685 aa14.04□□□□□ -0.16
GGA3-212ENST00000582376 TRPM3Q9HCF6 1732 aaPredicted RBP14.04□□□□□ -0.16
GGA3-212ENST00000582376 CASZ1Q86V15 1759 aa14.04□□□□□ -0.16
GGA3-212ENST00000582376 PTGER2P43116 358 aa14.03□□□□□ -0.16
GGA3-212ENST00000582376 ANO8Q9HCE9 1232 aaPredicted RBP14.03□□□□□ -0.16
GGA3-212ENST00000582376 ALS2Q96Q42 1657 aa14.03□□□□□ -0.16
GGA3-212ENST00000582376 FHDC1Q9C0D6 1143 aaPredicted RBP14.02□□□□□ -0.17
GGA3-212ENST00000582376 ANKARQ7Z5J8 1434 aa14.01□□□□□ -0.17
GGA3-212ENST00000582376 C11orf95C9JLR9 678 aaPredicted RBP14.01□□□□□ -0.17
GGA3-212ENST00000582376 CHRNA2Q15822 529 aa14.01□□□□□ -0.17
GGA3-212ENST00000582376 PDGFDQ9GZP0 370 aaPredicted RBP14.01□□□□□ -0.17
GGA3-212ENST00000582376 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
GGA3-212ENST00000582376 KIAA0232Q92628 1395 aa14□□□□□ -0.17
GGA3-212ENST00000582376 PLSCR1O15162 318 aa14□□□□□ -0.17
GGA3-212ENST00000582376 ANKRD30BQ9BXX2 1392 aa13.99□□□□□ -0.17
GGA3-212ENST00000582376 CRYBG1Q9Y4K1 1723 aa13.99□□□□□ -0.17
GGA3-212ENST00000582376 ACIN1Q9UKV3 1341 aaKnown RBP13.99□□□□□ -0.17
GGA3-212ENST00000582376 EVA1CP58658 441 aa13.99□□□□□ -0.17
GGA3-212ENST00000582376 BCL11BQ9C0K0 894 aaPredicted RBP13.99□□□□□ -0.17
GGA3-212ENST00000582376 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
GGA3-212ENST00000582376 SAFB2Q14151 953 aaKnown RBP eCLIP13.98□□□□□ -0.17
GGA3-212ENST00000582376 TCP11L2Q8N4U5 519 aa13.98□□□□□ -0.17
GGA3-212ENST00000582376 DLC1Q96QB1 1528 aa13.98□□□□□ -0.17
GGA3-212ENST00000582376 RGPD3A6NKT7 1758 aaPredicted RBP13.98□□□□□ -0.17
GGA3-212ENST00000582376 RGPD4Q7Z3J3 1758 aa13.98□□□□□ -0.17
GGA3-212ENST00000582376 SSH2Q76I76 1423 aa13.98□□□□□ -0.17
GGA3-212ENST00000582376 RGL3Q3MIN7 710 aa13.97□□□□□ -0.17
GGA3-212ENST00000582376 PIK3C2GO75747 1445 aa13.97□□□□□ -0.17
GGA3-212ENST00000582376 ZC3H6P61129 1189 aaKnown RBP13.96□□□□□ -0.17
GGA3-212ENST00000582376 PRAM1Q96QH2 718 aa13.96□□□□□ -0.17
GGA3-212ENST00000582376 GPR162Q16538 588 aa13.95□□□□□ -0.18
GGA3-212ENST00000582376 LARP1Q6PKG0 1096 aaKnown RBP13.95□□□□□ -0.18
GGA3-212ENST00000582376 MTFR1LQ9H019 292 aa13.95□□□□□ -0.18
GGA3-212ENST00000582376 STK32BQ9NY57 414 aa13.95□□□□□ -0.18
GGA3-212ENST00000582376 THRAP3Q9Y2W1 955 aaKnown RBP13.95□□□□□ -0.18
GGA3-212ENST00000582376 OVOS2A0A0G2JMS6 1433 aa13.95□□□□□ -0.18
GGA3-212ENST00000582376 OVOS2A0A0J9YW53 1432 aa13.95□□□□□ -0.18
GGA3-212ENST00000582376 OVOS2Q6IE36 1432 aa13.95□□□□□ -0.18
GGA3-212ENST00000582376 DHX57Q6P158 1386 aaKnown RBP13.95□□□□□ -0.18
GGA3-212ENST00000582376 NGDNQ8NEJ9 315 aaKnown RBP13.94□□□□□ -0.18
GGA3-212ENST00000582376 SGIP1Q9BQI5 828 aa13.93□□□□□ -0.18
GGA3-212ENST00000582376 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
GGA3-212ENST00000582376 POGKQ9P215 609 aa13.93□□□□□ -0.18
GGA3-212ENST00000582376 ARXQ96QS3 562 aa13.92□□□□□ -0.18
GGA3-212ENST00000582376 C14orf93Q9H972 538 aaKnown RBP13.92□□□□□ -0.18
GGA3-212ENST00000582376 EIF3AQ14152 1382 aaKnown RBP13.92□□□□□ -0.18
GGA3-212ENST00000582376 MAP3K5Q99683 1374 aa13.92□□□□□ -0.18
GGA3-212ENST00000582376 PHRF1Q9P1Y6 1649 aaKnown RBP13.91□□□□□ -0.18
GGA3-212ENST00000582376 PARP4Q9UKK3 1724 aaKnown RBP13.91□□□□□ -0.18
GGA3-212ENST00000582376 SLC15A2Q16348 729 aa13.91□□□□□ -0.18
GGA3-212ENST00000582376 PROM2Q8N271 834 aa13.91□□□□□ -0.18
GGA3-212ENST00000582376 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.18
GGA3-212ENST00000582376 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.18
GGA3-212ENST00000582376 PEAK1Q9H792 1746 aa13.9□□□□□ -0.18
GGA3-212ENST00000582376 HIRIP3Q9BW71 556 aaPredicted RBP13.89□□□□□ -0.19
GGA3-212ENST00000582376 UTRNP46939 3433 aa13.89□□□□□ -0.19
GGA3-212ENST00000582376 TULP4Q9NRJ4 1543 aa13.89□□□□□ -0.19
GGA3-212ENST00000582376 SBF2Q86WG5 1849 aa13.88□□□□□ -0.19
GGA3-212ENST00000582376 CFAP70Q5T0N1 1121 aa13.88□□□□□ -0.19
GGA3-212ENST00000582376 NUTM2GQ5VZR2 741 aa13.88□□□□□ -0.19
GGA3-212ENST00000582376 PTF1AQ7RTS3 328 aa13.88□□□□□ -0.19
GGA3-212ENST00000582376 ATP7BP35670 1465 aa13.87□□□□□ -0.19
GGA3-212ENST00000582376 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
GGA3-212ENST00000582376 TXNRD1Q16881 649 aa13.87□□□□□ -0.19
GGA3-212ENST00000582376 DDB1Q16531 1140 aa13.86□□□□□ -0.19
GGA3-212ENST00000582376 PELP1Q8IZL8 1130 aaKnown RBP13.86□□□□□ -0.19
GGA3-212ENST00000582376 MINK1Q8N4C8 1332 aaPredicted RBP13.86□□□□□ -0.19
GGA3-212ENST00000582376 LMO7Q8WWI1 1683 aa13.85□□□□□ -0.19
GGA3-212ENST00000582376 CPDO75976 1380 aa13.85□□□□□ -0.19
GGA3-212ENST00000582376 WASLO00401 505 aaPredicted RBP13.85□□□□□ -0.19
GGA3-212ENST00000582376 HSPA6P17066 643 aa13.85□□□□□ -0.19
GGA3-212ENST00000582376 CRB1P82279 1406 aa13.84□□□□□ -0.19
GGA3-212ENST00000582376 LRRC37A3O60309 1634 aa13.83□□□□□ -0.2
GGA3-212ENST00000582376 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
GGA3-212ENST00000582376 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
GGA3-212ENST00000582376 BCL9O00512 1426 aa13.82□□□□□ -0.2
GGA3-212ENST00000582376 CEP350Q5VT06 3117 aa13.81□□□□□ -0.2
GGA3-212ENST00000582376 MARCH10Q8NA82 808 aaPredicted RBP13.81□□□□□ -0.2
GGA3-212ENST00000582376 TRAK1Q9UPV9 953 aa13.81□□□□□ -0.2
GGA3-212ENST00000582376 AATKQ6ZMQ8 1374 aa13.81□□□□□ -0.2
GGA3-212ENST00000582376 ATP10DQ9P241 1426 aa13.8□□□□□ -0.2
GGA3-212ENST00000582376 ITSN1Q15811 1721 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms