RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
PDLIM1P3-201ENST00000582370 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
PDLIM1P3-201ENST00000582370 FAM196AQ6ZSG2 479 aa12.83□□□□□ -0.36
PDLIM1P3-201ENST00000582370 SPON1Q9HCB6 807 aa12.83□□□□□ -0.36
PDLIM1P3-201ENST00000582370 CASZ1Q86V15 1759 aa12.83□□□□□ -0.36
PDLIM1P3-201ENST00000582370 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
PDLIM1P3-201ENST00000582370 TRIM37O94972 964 aa12.81□□□□□ -0.36
PDLIM1P3-201ENST00000582370 APBA3O96018 575 aa12.81□□□□□ -0.36
PDLIM1P3-201ENST00000582370 STK26Q9P289 416 aa12.81□□□□□ -0.36
PDLIM1P3-201ENST00000582370 NRKQ7Z2Y5 1582 aa12.81□□□□□ -0.36
PDLIM1P3-201ENST00000582370 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
PDLIM1P3-201ENST00000582370 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
PDLIM1P3-201ENST00000582370 YTHDC2Q9H6S0 1430 aaKnown RBP12.8□□□□□ -0.36
PDLIM1P3-201ENST00000582370 SENP3-EIF4A1A0A087X0R7 540 aa12.8□□□□□ -0.36
PDLIM1P3-201ENST00000582370 KCNQ2O43526 872 aa12.8□□□□□ -0.36
PDLIM1P3-201ENST00000582370 ZNF784Q8NCA9 323 aaPredicted RBP12.79□□□□□ -0.36
PDLIM1P3-201ENST00000582370 MYOM1P52179 1685 aa12.79□□□□□ -0.36
PDLIM1P3-201ENST00000582370 RAB3GAP2Q9H2M9 1393 aa12.79□□□□□ -0.36
PDLIM1P3-201ENST00000582370 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
PDLIM1P3-201ENST00000582370 SIRT1Q96EB6 747 aa12.78□□□□□ -0.36
PDLIM1P3-201ENST00000582370 PARP4Q9UKK3 1724 aaKnown RBP12.78□□□□□ -0.36
PDLIM1P3-201ENST00000582370 SPATA31A1Q5TZJ5 1347 aa12.78□□□□□ -0.36
PDLIM1P3-201ENST00000582370 ADGRF5Q8IZF2 1346 aa12.78□□□□□ -0.36
PDLIM1P3-201ENST00000582370 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
PDLIM1P3-201ENST00000582370 ANKRD30BQ9BXX2 1392 aa12.78□□□□□ -0.36
PDLIM1P3-201ENST00000582370 ITSN1Q15811 1721 aa12.76□□□□□ -0.37
PDLIM1P3-201ENST00000582370 C1QTNF8P60827 252 aa12.75□□□□□ -0.37
PDLIM1P3-201ENST00000582370 GPRASP1Q5JY77 1395 aa12.75□□□□□ -0.37
PDLIM1P3-201ENST00000582370 TMEM132EQ6IEE7 984 aa12.75□□□□□ -0.37
PDLIM1P3-201ENST00000582370 SPATA31E1Q6ZUB1 1445 aa12.74□□□□□ -0.37
PDLIM1P3-201ENST00000582370 CLSPNQ9HAW4 1339 aa12.74□□□□□ -0.37
PDLIM1P3-201ENST00000582370 PRDM11Q9NQV5 511 aa12.74□□□□□ -0.37
PDLIM1P3-201ENST00000582370 DLC1Q96QB1 1528 aa12.73□□□□□ -0.37
PDLIM1P3-201ENST00000582370 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
PDLIM1P3-201ENST00000582370 PMFBP1Q8TBY8 1022 aa12.73□□□□□ -0.37
PDLIM1P3-201ENST00000582370 PEAK1Q9H792 1746 aa12.73□□□□□ -0.37
PDLIM1P3-201ENST00000582370 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
PDLIM1P3-201ENST00000582370 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
PDLIM1P3-201ENST00000582370 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.37
PDLIM1P3-201ENST00000582370 C11orf95C9JLR9 678 aaPredicted RBP12.71□□□□□ -0.37
PDLIM1P3-201ENST00000582370 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
PDLIM1P3-201ENST00000582370 SSH2Q76I76 1423 aa12.71□□□□□ -0.38
PDLIM1P3-201ENST00000582370 KIAA0232Q92628 1395 aa12.7□□□□□ -0.38
PDLIM1P3-201ENST00000582370 ATP7BP35670 1465 aa12.7□□□□□ -0.38
PDLIM1P3-201ENST00000582370 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
PDLIM1P3-201ENST00000582370 WNK3Q9BYP7 1800 aa12.69□□□□□ -0.38
PDLIM1P3-201ENST00000582370 AKAP12Q02952 1782 aa12.69□□□□□ -0.38
PDLIM1P3-201ENST00000582370 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
PDLIM1P3-201ENST00000582370 CEP350Q5VT06 3117 aa12.69□□□□□ -0.38
PDLIM1P3-201ENST00000582370 STRN4Q9NRL3 753 aa12.68□□□□□ -0.38
PDLIM1P3-201ENST00000582370 LRRC37A3O60309 1634 aa12.68□□□□□ -0.38
PDLIM1P3-201ENST00000582370 OVOS2A0A0G2JMS6 1433 aa12.68□□□□□ -0.38
PDLIM1P3-201ENST00000582370 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
PDLIM1P3-201ENST00000582370 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
PDLIM1P3-201ENST00000582370 PRAM1Q96QH2 718 aa12.67□□□□□ -0.38
PDLIM1P3-201ENST00000582370 PLSCR1O15162 318 aa12.66□□□□□ -0.38
PDLIM1P3-201ENST00000582370 RGL3Q3MIN7 710 aa12.66□□□□□ -0.38
PDLIM1P3-201ENST00000582370 C14orf93Q9H972 538 aaKnown RBP12.66□□□□□ -0.38
PDLIM1P3-201ENST00000582370 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
PDLIM1P3-201ENST00000582370 USP35Q9P2H5 1018 aa12.66□□□□□ -0.38
PDLIM1P3-201ENST00000582370 SAFB2Q14151 953 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDLIM1P3-201ENST00000582370 CHRNA2Q15822 529 aa12.65□□□□□ -0.38
PDLIM1P3-201ENST00000582370 TCP11L2Q8N4U5 519 aa12.65□□□□□ -0.38
PDLIM1P3-201ENST00000582370 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
PDLIM1P3-201ENST00000582370 THRAP3Q9Y2W1 955 aaKnown RBP12.65□□□□□ -0.38
PDLIM1P3-201ENST00000582370 PAK3O75914 559 aaPredicted RBP12.64□□□□□ -0.39
PDLIM1P3-201ENST00000582370 PTGER2P43116 358 aa12.64□□□□□ -0.39
PDLIM1P3-201ENST00000582370 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
PDLIM1P3-201ENST00000582370 POGKQ9P215 609 aa12.64□□□□□ -0.39
PDLIM1P3-201ENST00000582370 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
PDLIM1P3-201ENST00000582370 PRR36Q9H6K5 1346 aa12.63□□□□□ -0.39
PDLIM1P3-201ENST00000582370 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
PDLIM1P3-201ENST00000582370 EVA1CP58658 441 aa12.63□□□□□ -0.39
PDLIM1P3-201ENST00000582370 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
PDLIM1P3-201ENST00000582370 ADGRB1O14514 1584 aa12.63□□□□□ -0.39
PDLIM1P3-201ENST00000582370 MAP3K5Q99683 1374 aa12.62□□□□□ -0.39
PDLIM1P3-201ENST00000582370 ZBTB7AO95365 584 aa12.62□□□□□ -0.39
PDLIM1P3-201ENST00000582370 FHDC1Q9C0D6 1143 aaPredicted RBP12.62□□□□□ -0.39
PDLIM1P3-201ENST00000582370 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
PDLIM1P3-201ENST00000582370 COL5A2P05997 1499 aaPredicted RBP12.61□□□□□ -0.39
PDLIM1P3-201ENST00000582370 CPDO75976 1380 aa12.61□□□□□ -0.39
PDLIM1P3-201ENST00000582370 ZC3H6P61129 1189 aaKnown RBP12.61□□□□□ -0.39
PDLIM1P3-201ENST00000582370 CFAP70Q5T0N1 1121 aa12.61□□□□□ -0.39
PDLIM1P3-201ENST00000582370 LARP1Q6PKG0 1096 aaKnown RBP12.61□□□□□ -0.39
PDLIM1P3-201ENST00000582370 CCER1Q8TC90 406 aaPredicted RBP12.61□□□□□ -0.39
PDLIM1P3-201ENST00000582370 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
PDLIM1P3-201ENST00000582370 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
PDLIM1P3-201ENST00000582370 ARHGEF28Q8N1W1 1705 aaKnown RBP12.6□□□□□ -0.39
PDLIM1P3-201ENST00000582370 BCL11BQ9C0K0 894 aaPredicted RBP12.6□□□□□ -0.39
PDLIM1P3-201ENST00000582370 MTFR1LQ9H019 292 aa12.6□□□□□ -0.39
PDLIM1P3-201ENST00000582370 TIMELESSQ9UNS1 1208 aa12.6□□□□□ -0.39
PDLIM1P3-201ENST00000582370 CRB1P82279 1406 aa12.6□□□□□ -0.39
PDLIM1P3-201ENST00000582370 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
PDLIM1P3-201ENST00000582370 BCL9O00512 1426 aa12.59□□□□□ -0.39
PDLIM1P3-201ENST00000582370 WASLO00401 505 aaPredicted RBP12.58□□□□□ -0.4
PDLIM1P3-201ENST00000582370 ZEB1P37275 1124 aaPredicted RBP12.58□□□□□ -0.4
PDLIM1P3-201ENST00000582370 COL24A1Q17RW2 1714 aa12.58□□□□□ -0.4
PDLIM1P3-201ENST00000582370 QSER1Q2KHR3 1735 aa12.58□□□□□ -0.4
PDLIM1P3-201ENST00000582370 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
PDLIM1P3-201ENST00000582370 HIRIP3Q9BW71 556 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms