RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 BAG6P46379 1132 aa12.68□□□□□ -0.38
CDK5RAP3-221ENST00000581662 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-221ENST00000581662 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-221ENST00000581662 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
CDK5RAP3-221ENST00000581662 CEP162Q5TB80 1403 aa12.67□□□□□ -0.38
CDK5RAP3-221ENST00000581662 PTPRUQ92729 1446 aa12.67□□□□□ -0.38
CDK5RAP3-221ENST00000581662 EHBP1L1Q8N3D4 1523 aa12.67□□□□□ -0.38
CDK5RAP3-221ENST00000581662 UTRNP46939 3433 aa12.66□□□□□ -0.38
CDK5RAP3-221ENST00000581662 DISP2A7MBM2 1401 aa12.66□□□□□ -0.38
CDK5RAP3-221ENST00000581662 UBTFP17480 764 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-221ENST00000581662 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-221ENST00000581662 NINLQ9Y2I6 1382 aa12.66□□□□□ -0.38
CDK5RAP3-221ENST00000581662 RIMS2Q9UQ26 1411 aa12.65□□□□□ -0.38
CDK5RAP3-221ENST00000581662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-221ENST00000581662 PPP1R15AO75807 674 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-221ENST00000581662 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-221ENST00000581662 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
CDK5RAP3-221ENST00000581662 SLIT2O94813 1529 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 TSPY4P0CV99 314 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 TSPY10P0CW01 314 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 EFCAB3Q8N7B9 438 aa12.64□□□□□ -0.39
CDK5RAP3-221ENST00000581662 G3V3G9 751 aa12.63□□□□□ -0.39
CDK5RAP3-221ENST00000581662 SEPT12Q8IYM1 358 aa12.63□□□□□ -0.39
CDK5RAP3-221ENST00000581662 DUOX2Q9NRD8 1548 aa12.62□□□□□ -0.39
CDK5RAP3-221ENST00000581662 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-221ENST00000581662 XRN1Q8IZH2 1706 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-221ENST00000581662 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
CDK5RAP3-221ENST00000581662 C1orf167Q5SNV9 1468 aa12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 AMOTL2Q9Y2J4 779 aa12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
CDK5RAP3-221ENST00000581662 MARF1Q9Y4F3 1742 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-221ENST00000581662 KRT27Q7Z3Y8 459 aa12.6□□□□□ -0.39
CDK5RAP3-221ENST00000581662 SLC52A1Q9NWF4 448 aa12.6□□□□□ -0.39
CDK5RAP3-221ENST00000581662 POTEMA6NI47 508 aa12.58□□□□□ -0.4
CDK5RAP3-221ENST00000581662 ERBINQ96RT1 1412 aa12.58□□□□□ -0.4
CDK5RAP3-221ENST00000581662 TMEM131LA2VDJ0 1609 aa12.57□□□□□ -0.4
CDK5RAP3-221ENST00000581662 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-221ENST00000581662 RGPD1P0DJD0 1748 aa12.57□□□□□ -0.4
CDK5RAP3-221ENST00000581662 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
CDK5RAP3-221ENST00000581662 NALCNQ8IZF0 1738 aa12.55□□□□□ -0.4
CDK5RAP3-221ENST00000581662 TNS1Q9HBL0 1735 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-221ENST00000581662 HDGFP51858 240 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-221ENST00000581662 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-221ENST00000581662 EZH2Q15910 746 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-221ENST00000581662 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
CDK5RAP3-221ENST00000581662 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
CDK5RAP3-221ENST00000581662 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
CDK5RAP3-221ENST00000581662 MYO5BQ9ULV0 1848 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 RGL2O15211 777 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 SOX12O15370 315 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 VPS72Q15906 364 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 PPP1R1BQ9UD71 204 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 PXDNQ92626 1479 aa12.53□□□□□ -0.4
CDK5RAP3-221ENST00000581662 STK25O00506 426 aa12.52□□□□□ -0.41
CDK5RAP3-221ENST00000581662 ORAI2Q96SN7 254 aa12.52□□□□□ -0.41
CDK5RAP3-221ENST00000581662 KANK1Q14678 1352 aa12.52□□□□□ -0.41
CDK5RAP3-221ENST00000581662 KIF15Q9NS87 1388 aa12.52□□□□□ -0.41
CDK5RAP3-221ENST00000581662 PTPN23Q9H3S7 1636 aa12.51□□□□□ -0.41
CDK5RAP3-221ENST00000581662 SLC34A2O95436 690 aa12.51□□□□□ -0.41
CDK5RAP3-221ENST00000581662 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
CDK5RAP3-221ENST00000581662 PARD3Q8TEW0 1356 aa12.51□□□□□ -0.41
CDK5RAP3-221ENST00000581662 SNPHO15079 494 aa12.5□□□□□ -0.41
CDK5RAP3-221ENST00000581662 ADGRB2O60241 1585 aa12.5□□□□□ -0.41
CDK5RAP3-221ENST00000581662 NRXN3Q9Y4C0 1643 aa12.5□□□□□ -0.41
CDK5RAP3-221ENST00000581662 KCNQ2O43526 872 aa12.49□□□□□ -0.41
CDK5RAP3-221ENST00000581662 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-221ENST00000581662 RREB1Q92766 1687 aa12.48□□□□□ -0.41
CDK5RAP3-221ENST00000581662 USP32Q8NFA0 1604 aa12.48□□□□□ -0.41
CDK5RAP3-221ENST00000581662 ADGRL2O95490 1459 aa12.48□□□□□ -0.41
CDK5RAP3-221ENST00000581662 LCE2DQ5TA82 110 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-221ENST00000581662 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
CDK5RAP3-221ENST00000581662 METP08581 1390 aa12.46□□□□□ -0.41
CDK5RAP3-221ENST00000581662 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.41
CDK5RAP3-221ENST00000581662 CROCC2H7BZ55 1655 aa12.46□□□□□ -0.41
CDK5RAP3-221ENST00000581662 NPHP3Q7Z494 1330 aa12.45□□□□□ -0.42
CDK5RAP3-221ENST00000581662 NRKQ7Z2Y5 1582 aa12.44□□□□□ -0.42
CDK5RAP3-221ENST00000581662 ST18O60284 1047 aa12.44□□□□□ -0.42
CDK5RAP3-221ENST00000581662 NLRP6P59044 892 aa12.44□□□□□ -0.42
CDK5RAP3-221ENST00000581662 NWD2Q9ULI1 1742 aa12.44□□□□□ -0.42
CDK5RAP3-221ENST00000581662 PLCH1Q4KWH8 1693 aa12.43□□□□□ -0.42
CDK5RAP3-221ENST00000581662 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
CDK5RAP3-221ENST00000581662 CHD4Q14839 1912 aa12.41□□□□□ -0.42
CDK5RAP3-221ENST00000581662 FAM98CQ17RN3 349 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-221ENST00000581662 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
CDK5RAP3-221ENST00000581662 THSD7AQ9UPZ6 1657 aa12.41□□□□□ -0.42
CDK5RAP3-221ENST00000581662 RRP7BPQ9NSQ0 103 aa12.4□□□□□ -0.42
CDK5RAP3-221ENST00000581662 CCDC9Q9Y3X0 531 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-221ENST00000581662 MYOM1P52179 1685 aa12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 MYOM3Q5VTT5 1437 aa12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 A0A0G2JS52 829 aa12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 MYT1Q01538 1121 aa12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-221ENST00000581662 NBPF8Q3BBV2 869 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms