RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MPHOSPH9Q99550 1183 aa28.73■■■□□ 2.19
LIMD2-209ENST00000580222 HIRIP3Q9BW71 556 aaPredicted RBP28.73■■■□□ 2.19
LIMD2-209ENST00000580222 TRPM3Q9HCF6 1732 aaPredicted RBP28.73■■■□□ 2.19
LIMD2-209ENST00000580222 COL14A1Q05707 1796 aaKnown RBP28.73■■■□□ 2.19
LIMD2-209ENST00000580222 ACIN1Q9UKV3 1341 aaKnown RBP28.72■■■□□ 2.19
LIMD2-209ENST00000580222 APBA3O96018 575 aa28.72■■■□□ 2.19
LIMD2-209ENST00000580222 SPATA31A1Q5TZJ5 1347 aa28.71■■■□□ 2.19
LIMD2-209ENST00000580222 POGKQ9P215 609 aa28.7■■■□□ 2.18
LIMD2-209ENST00000580222 CHRNA2Q15822 529 aa28.69■■■□□ 2.18
LIMD2-209ENST00000580222 FAM196AQ6ZSG2 479 aa28.69■■■□□ 2.18
LIMD2-209ENST00000580222 PRDM11Q9NQV5 511 aa28.69■■■□□ 2.18
LIMD2-209ENST00000580222 ALS2Q96Q42 1657 aa28.68■■■□□ 2.18
LIMD2-209ENST00000580222 GPRASP1Q5JY77 1395 aa28.67■■■□□ 2.18
LIMD2-209ENST00000580222 STRN4Q9NRL3 753 aa28.65■■■□□ 2.18
LIMD2-209ENST00000580222 MINK1Q8N4C8 1332 aaPredicted RBP28.65■■■□□ 2.18
LIMD2-209ENST00000580222 KIAA0232Q92628 1395 aa28.64■■■□□ 2.18
LIMD2-209ENST00000580222 PAK3O75914 559 aaPredicted RBP28.64■■■□□ 2.18
LIMD2-209ENST00000580222 TRAK1Q9UPV9 953 aa28.62■■■□□ 2.17
LIMD2-209ENST00000580222 DLC1Q96QB1 1528 aa28.61■■■□□ 2.17
LIMD2-209ENST00000580222 USP35Q9P2H5 1018 aa28.61■■■□□ 2.17
LIMD2-209ENST00000580222 ADGRB2O60241 1585 aa28.61■■■□□ 2.17
LIMD2-209ENST00000580222 PARD3Q8TEW0 1356 aa28.61■■■□□ 2.17
LIMD2-209ENST00000580222 CRYBG1Q9Y4K1 1723 aa28.6■■■□□ 2.17
LIMD2-209ENST00000580222 NGDNQ8NEJ9 315 aaKnown RBP28.6■■■□□ 2.17
LIMD2-209ENST00000580222 ZC3H6P61129 1189 aaKnown RBP28.59■■■□□ 2.17
LIMD2-209ENST00000580222 WASLO00401 505 aaPredicted RBP28.58■■■□□ 2.17
LIMD2-209ENST00000580222 NUTM2GQ5VZR2 741 aa28.56■■■□□ 2.16
LIMD2-209ENST00000580222 ADGRB1O14514 1584 aa28.55■■■□□ 2.16
LIMD2-209ENST00000580222 TULP4Q9NRJ4 1543 aa28.54■■■□□ 2.16
LIMD2-209ENST00000580222 PDE3BQ13370 1112 aa28.54■■■□□ 2.16
LIMD2-209ENST00000580222 NBPF8Q3BBV2 869 aa28.54■■■□□ 2.16
LIMD2-209ENST00000580222 NBPF14Q5TI25 921 aa28.54■■■□□ 2.16
LIMD2-209ENST00000580222 SPON1Q9HCB6 807 aa28.54■■■□□ 2.16
LIMD2-209ENST00000580222 KCNQ2O43526 872 aa28.53■■■□□ 2.16
LIMD2-209ENST00000580222 BARGINQ6ZT62 677 aa28.53■■■□□ 2.16
LIMD2-209ENST00000580222 RREB1Q92766 1687 aa28.53■■■□□ 2.16
LIMD2-209ENST00000580222 LARP1Q6PKG0 1096 aaKnown RBP28.52■■■□□ 2.16
LIMD2-209ENST00000580222 PPP1R1BQ9UD71 204 aaPredicted RBP28.52■■■□□ 2.16
LIMD2-209ENST00000580222 NUP188Q5SRE5 1749 aa28.52■■■□□ 2.16
LIMD2-209ENST00000580222 SSH2Q76I76 1423 aa28.5■■■□□ 2.15
LIMD2-209ENST00000580222 EVA1CP58658 441 aa28.49■■■□□ 2.15
LIMD2-209ENST00000580222 EIF3AQ14152 1382 aaKnown RBP28.48■■■□□ 2.15
LIMD2-209ENST00000580222 TRIM26Q12899 539 aaPredicted RBP28.47■■■□□ 2.15
LIMD2-209ENST00000580222 NUDT16Q96DE0 195 aaKnown RBP28.47■■■□□ 2.15
LIMD2-209ENST00000580222 CAMTA1Q9Y6Y1 1673 aa28.46■■■□□ 2.15
LIMD2-209ENST00000580222 TCP11L2Q8N4U5 519 aa28.45■■■□□ 2.14
LIMD2-209ENST00000580222 PDGFDQ9GZP0 370 aaPredicted RBP28.45■■■□□ 2.14
LIMD2-209ENST00000580222 NINLQ9Y2I6 1382 aa28.45■■■□□ 2.14
LIMD2-209ENST00000580222 UTRNP46939 3433 aa28.43■■■□□ 2.14
LIMD2-209ENST00000580222 ANO8Q9HCE9 1232 aaPredicted RBP28.43■■■□□ 2.14
LIMD2-209ENST00000580222 ATP7BP35670 1465 aa28.42■■■□□ 2.14
LIMD2-209ENST00000580222 PTF1AQ7RTS3 328 aa28.42■■■□□ 2.14
LIMD2-209ENST00000580222 PHRF1Q9P1Y6 1649 aaKnown RBP28.42■■■□□ 2.14
LIMD2-209ENST00000580222 KDM2AQ9Y2K7 1162 aa28.41■■■□□ 2.14
LIMD2-209ENST00000580222 DCAF8L1A6NGE4 600 aa28.38■■■□□ 2.13
LIMD2-209ENST00000580222 ACEP12821 1306 aa28.38■■■□□ 2.13
LIMD2-209ENST00000580222 CDK19Q9BWU1 502 aa28.36■■■□□ 2.13
LIMD2-209ENST00000580222 PROM2Q8N271 834 aa28.35■■■□□ 2.13
LIMD2-209ENST00000580222 ZNF784Q8NCA9 323 aaPredicted RBP28.35■■■□□ 2.13
LIMD2-209ENST00000580222 POLR3AO14802 1390 aaPredicted RBP28.35■■■□□ 2.13
LIMD2-209ENST00000580222 CPDO75976 1380 aa28.35■■■□□ 2.13
LIMD2-209ENST00000580222 THRAP3Q9Y2W1 955 aaKnown RBP28.34■■■□□ 2.13
LIMD2-209ENST00000580222 ABTB2Q8N961 1025 aa28.33■■■□□ 2.13
LIMD2-209ENST00000580222 DCAF11Q8TEB1 546 aa28.33■■■□□ 2.13
LIMD2-209ENST00000580222 USP19O94966 1318 aa28.33■■■□□ 2.13
LIMD2-209ENST00000580222 NRKQ7Z2Y5 1582 aa28.33■■■□□ 2.12
LIMD2-209ENST00000580222 LMO7Q8WWI1 1683 aa28.32■■■□□ 2.12
LIMD2-209ENST00000580222 PLSCR1O15162 318 aa28.32■■■□□ 2.12
LIMD2-209ENST00000580222 ZBTB7AO95365 584 aa28.32■■■□□ 2.12
LIMD2-209ENST00000580222 PTGER2P43116 358 aa28.31■■■□□ 2.12
LIMD2-209ENST00000580222 GCP02774 474 aa28.3■■■□□ 2.12
LIMD2-209ENST00000580222 PLEKHG3A1L390 1219 aa28.29■■■□□ 2.12
LIMD2-209ENST00000580222 COL5A2P05997 1499 aaPredicted RBP28.28■■■□□ 2.12
LIMD2-209ENST00000580222 ATF5Q9Y2D1 282 aaPredicted RBP28.28■■■□□ 2.12
LIMD2-209ENST00000580222 PEAK1Q9H792 1746 aa28.27■■■□□ 2.12
LIMD2-209ENST00000580222 CCDC61Q9Y6R9 512 aa28.27■■■□□ 2.12
LIMD2-209ENST00000580222 CASZ1Q86V15 1759 aa28.26■■■□□ 2.11
LIMD2-209ENST00000580222 OVOS2A0A0G2JMS6 1433 aa28.26■■■□□ 2.11
LIMD2-209ENST00000580222 OVOS2A0A0J9YW53 1432 aa28.26■■■□□ 2.11
LIMD2-209ENST00000580222 OVOS2Q6IE36 1432 aa28.26■■■□□ 2.11
LIMD2-209ENST00000580222 PARP4Q9UKK3 1724 aaKnown RBP28.24■■■□□ 2.11
LIMD2-209ENST00000580222 BCL11BQ9C0K0 894 aaPredicted RBP28.24■■■□□ 2.11
LIMD2-209ENST00000580222 CRB1P82279 1406 aa28.23■■■□□ 2.11
LIMD2-209ENST00000580222 C11orf95C9JLR9 678 aaPredicted RBP28.22■■■□□ 2.11
LIMD2-209ENST00000580222 ITSN1Q15811 1721 aa28.22■■■□□ 2.11
LIMD2-209ENST00000580222 MARCH10Q8NA82 808 aaPredicted RBP28.22■■■□□ 2.11
LIMD2-209ENST00000580222 ZBTB7CA1YPR0 619 aa28.21■■■□□ 2.11
LIMD2-209ENST00000580222 DDB1Q16531 1140 aa28.21■■■□□ 2.11
LIMD2-209ENST00000580222 NLRP13Q86W25 1043 aa28.21■■■□□ 2.11
LIMD2-209ENST00000580222 FHDC1Q9C0D6 1143 aaPredicted RBP28.21■■■□□ 2.11
LIMD2-209ENST00000580222 SYT17Q9BSW7 474 aa28.2■■■□□ 2.1
LIMD2-209ENST00000580222 RAB3GAP2Q9H2M9 1393 aa28.2■■■□□ 2.1
LIMD2-209ENST00000580222 ARHGEF28Q8N1W1 1705 aaKnown RBP28.2■■■□□ 2.1
LIMD2-209ENST00000580222 MYOM1P52179 1685 aa28.19■■■□□ 2.1
LIMD2-209ENST00000580222 TOPAZ1Q8N9V7 1692 aa28.19■■■□□ 2.1
LIMD2-209ENST00000580222 SENP3-EIF4A1A0A087X0R7 540 aa28.18■■■□□ 2.1
LIMD2-209ENST00000580222 PCGF6Q9BYE7 350 aa28.17■■■□□ 2.1
LIMD2-209ENST00000580222 AXIN2Q9Y2T1 843 aa28.17■■■□□ 2.1
LIMD2-209ENST00000580222 SGIP1Q9BQI5 828 aa28.16■■■□□ 2.1
LIMD2-209ENST00000580222 LRRC37A3O60309 1634 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms