RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 RETREG3Q86VR2 466 aa7.71□□□□□ -1.18
CDH8-206ENST00000580044 KIFC2Q96AC6 838 aa7.71□□□□□ -1.18
CDH8-206ENST00000580044 CUX1P39880 1505 aa7.7□□□□□ -1.18
CDH8-206ENST00000580044 FDX1P10109 184 aa7.7□□□□□ -1.18
CDH8-206ENST00000580044 TTLL12Q14166 644 aaPredicted RBP7.7□□□□□ -1.18
CDH8-206ENST00000580044 RC3H1Q5TC82 1133 aaKnown RBP7.7□□□□□ -1.18
CDH8-206ENST00000580044 FAM217BQ9NTX9 383 aaPredicted RBP7.7□□□□□ -1.18
CDH8-206ENST00000580044 GMPR2Q9P2T1 348 aaKnown RBP7.7□□□□□ -1.18
CDH8-206ENST00000580044 WFS1O76024 890 aa7.69□□□□□ -1.18
CDH8-206ENST00000580044 DIXDC1Q155Q3 683 aa7.69□□□□□ -1.18
CDH8-206ENST00000580044 EHBP1Q8NDI1 1231 aa7.69□□□□□ -1.18
CDH8-206ENST00000580044 NUDT12Q9BQG2 462 aa7.69□□□□□ -1.18
CDH8-206ENST00000580044 WASF2Q9Y6W5 498 aa7.69□□□□□ -1.18
CDH8-206ENST00000580044 CFAP43Q8NDM7 1665 aa7.69□□□□□ -1.18
CDH8-206ENST00000580044 CFTRP13569 1480 aa7.68□□□□□ -1.18
CDH8-206ENST00000580044 ALDH1A1P00352 501 aa7.68□□□□□ -1.18
CDH8-206ENST00000580044 SMPD1P17405 629 aa7.68□□□□□ -1.18
CDH8-206ENST00000580044 DHX57Q6P158 1386 aaKnown RBP7.68□□□□□ -1.18
CDH8-206ENST00000580044 TIAM1Q13009 1591 aa7.67□□□□□ -1.18
CDH8-206ENST00000580044 SPDYE5A6NIY4 337 aa7.67□□□□□ -1.18
CDH8-206ENST00000580044 MS4A1P11836 297 aa7.67□□□□□ -1.18
CDH8-206ENST00000580044 SSTR3P32745 418 aaPredicted RBP7.67□□□□□ -1.18
CDH8-206ENST00000580044 ATP13A2Q9NQ11 1180 aa7.67□□□□□ -1.18
CDH8-206ENST00000580044 J3QL48 77 aa7.66□□□□□ -1.18
CDH8-206ENST00000580044 PLEKHG3A1L390 1219 aa7.65□□□□□ -1.18
CDH8-206ENST00000580044 CCNYL3P0C7X3 344 aa7.65□□□□□ -1.18
CDH8-206ENST00000580044 INSM1Q01101 510 aaPredicted RBP7.65□□□□□ -1.18
CDH8-206ENST00000580044 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.65□□□□□ -1.18
CDH8-206ENST00000580044 SLC16A10Q8TF71 515 aa7.65□□□□□ -1.18
CDH8-206ENST00000580044 HLA-CQ95604 372 aa7.65□□□□□ -1.18
CDH8-206ENST00000580044 ARHGAP35Q9NRY4 1499 aa7.65□□□□□ -1.18
CDH8-206ENST00000580044 DACH1Q9UI36 760 aa7.65□□□□□ -1.18
CDH8-206ENST00000580044 CCNB3Q8WWL7 1395 aa7.64□□□□□ -1.19
CDH8-206ENST00000580044 GUCA2AQ02747 115 aa7.64□□□□□ -1.19
CDH8-206ENST00000580044 SYMPKQ92797 1274 aaKnown RBP7.64□□□□□ -1.19
CDH8-206ENST00000580044 FHAD1B1AJZ9 1412 aa7.62□□□□□ -1.19
CDH8-206ENST00000580044 MTMR2Q13614 643 aa7.62□□□□□ -1.19
CDH8-206ENST00000580044 PTPRNQ16849 979 aa7.62□□□□□ -1.19
CDH8-206ENST00000580044 HPS1Q92902 700 aa7.62□□□□□ -1.19
CDH8-206ENST00000580044 TRIM47Q96LD4 638 aa7.62□□□□□ -1.19
CDH8-206ENST00000580044 YTHDC1Q96MU7 727 aaKnown RBP7.62□□□□□ -1.19
CDH8-206ENST00000580044 EFCAB5A4FU69 1503 aa7.62□□□□□ -1.19
CDH8-206ENST00000580044 CTTNBP2Q8WZ74 1663 aa7.61□□□□□ -1.19
CDH8-206ENST00000580044 CC2D2AQ9P2K1 1620 aa7.61□□□□□ -1.19
CDH8-206ENST00000580044 SPIRE2Q8WWL2 714 aa7.61□□□□□ -1.19
CDH8-206ENST00000580044 CUL7Q14999 1698 aa7.6□□□□□ -1.19
CDH8-206ENST00000580044 FAM181BA6NEQ2 426 aa7.6□□□□□ -1.19
CDH8-206ENST00000580044 CAPN5O15484 640 aaPredicted RBP7.6□□□□□ -1.19
CDH8-206ENST00000580044 CTHP32929 405 aa7.6□□□□□ -1.19
CDH8-206ENST00000580044 SKOR1P84550 965 aa7.6□□□□□ -1.19
CDH8-206ENST00000580044 BARGINQ6ZT62 677 aa7.6□□□□□ -1.19
CDH8-206ENST00000580044 PRR7Q8TB68 274 aa7.6□□□□□ -1.19
CDH8-206ENST00000580044 EVA1BQ9NVM1 165 aa7.59□□□□□ -1.19
CDH8-206ENST00000580044 KIF21AQ7Z4S6 1674 aa7.59□□□□□ -1.19
CDH8-206ENST00000580044 AQRO60306 1485 aaKnown RBP eCLIP7.58□□□□□ -1.2
CDH8-206ENST00000580044 LRRC9Q6ZRR7 1453 aa7.58□□□□□ -1.2
CDH8-206ENST00000580044 FYCO1Q9BQS8 1478 aa7.58□□□□□ -1.2
CDH8-206ENST00000580044 TERTO14746 1132 aaKnown RBP7.58□□□□□ -1.2
CDH8-206ENST00000580044 VARSP26640 1264 aaKnown RBP7.58□□□□□ -1.2
CDH8-206ENST00000580044 KCNH2Q12809 1159 aa7.58□□□□□ -1.2
CDH8-206ENST00000580044 DESI1Q6ICB0 168 aa7.58□□□□□ -1.2
CDH8-206ENST00000580044 BEGAINQ9BUH8 593 aa7.58□□□□□ -1.2
CDH8-206ENST00000580044 UNC93B1Q9H1C4 597 aa7.58□□□□□ -1.2
CDH8-206ENST00000580044 STK17AQ9UEE5 414 aa7.58□□□□□ -1.2
CDH8-206ENST00000580044 TIMELESSQ9UNS1 1208 aa7.58□□□□□ -1.2
CDH8-206ENST00000580044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.58□□□□□ -1.2
CDH8-206ENST00000580044 MAPKBP1O60336 1514 aa7.57□□□□□ -1.2
CDH8-206ENST00000580044 MOXD2PA6NHM9 499 aa7.57□□□□□ -1.2
CDH8-206ENST00000580044 SNRPBP14678 240 aaKnown RBP7.57□□□□□ -1.2
CDH8-206ENST00000580044 NDUFV2P19404 249 aa7.57□□□□□ -1.2
CDH8-206ENST00000580044 GJA5P36382 358 aa7.57□□□□□ -1.2
CDH8-206ENST00000580044 SH3BP2P78314 561 aa7.57□□□□□ -1.2
CDH8-206ENST00000580044 SCARF1Q14162 830 aa7.57□□□□□ -1.2
CDH8-206ENST00000580044 AMHR2Q16671 573 aa7.57□□□□□ -1.2
CDH8-206ENST00000580044 GIGYF2Q6Y7W6 1299 aaKnown RBP7.57□□□□□ -1.2
CDH8-206ENST00000580044 PCF11O94913 1555 aaKnown RBP7.57□□□□□ -1.2
CDH8-206ENST00000580044 SETD5Q9C0A6 1442 aa7.56□□□□□ -1.2
CDH8-206ENST00000580044 ZMYND10O75800 440 aa7.56□□□□□ -1.2
CDH8-206ENST00000580044 AGERQ15109 404 aa7.56□□□□□ -1.2
CDH8-206ENST00000580044 LINC01559Q495D7 138 aa7.56□□□□□ -1.2
CDH8-206ENST00000580044 KANK4Q5T7N3 995 aaPredicted RBP7.56□□□□□ -1.2
CDH8-206ENST00000580044 PTCRAQ6ISU1 281 aaPredicted RBP7.56□□□□□ -1.2
CDH8-206ENST00000580044 FAM174AQ8TBP5 190 aa7.56□□□□□ -1.2
CDH8-206ENST00000580044 BAP1Q92560 729 aa7.56□□□□□ -1.2
CDH8-206ENST00000580044 PCDHGC3Q9UN70 934 aa7.56□□□□□ -1.2
CDH8-206ENST00000580044 FGD5Q6ZNL6 1462 aa7.55□□□□□ -1.2
CDH8-206ENST00000580044 DNMBPQ6XZF7 1577 aa7.55□□□□□ -1.2
CDH8-206ENST00000580044 NFX1Q12986 1120 aaKnown RBP7.55□□□□□ -1.2
CDH8-206ENST00000580044 ZBTB3Q9H5J0 574 aa7.55□□□□□ -1.2
CDH8-206ENST00000580044 RAB3GAP2Q9H2M9 1393 aa7.55□□□□□ -1.2
CDH8-206ENST00000580044 THOC2Q8NI27 1593 aaKnown RBP7.54□□□□□ -1.2
CDH8-206ENST00000580044 SIAH2O43255 324 aa7.54□□□□□ -1.2
CDH8-206ENST00000580044 RANGAP1P46060 587 aaPredicted RBP7.54□□□□□ -1.2
CDH8-206ENST00000580044 ZNF511Q8NB15 262 aa7.54□□□□□ -1.2
CDH8-206ENST00000580044 ZC3H15Q8WU90 426 aaKnown RBP7.54□□□□□ -1.2
CDH8-206ENST00000580044 WDR97A6NE52 1622 aa7.53□□□□□ -1.2
CDH8-206ENST00000580044 NUTM2BA6NNL0 878 aaPredicted RBP7.53□□□□□ -1.2
CDH8-206ENST00000580044 NUTM2EB1AL46 878 aaPredicted RBP7.53□□□□□ -1.2
CDH8-206ENST00000580044 WIPF1O43516 503 aa7.53□□□□□ -1.2
CDH8-206ENST00000580044 NUTM2DQ5VT03 806 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms