RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 STAC3Q96MF2 364 aa12.59□□□□□ -0.39
CASC3-206ENST00000579238 NGDNQ8NEJ9 315 aaKnown RBP12.58□□□□□ -0.4
CASC3-206ENST00000579238 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
CASC3-206ENST00000579238 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.4
CASC3-206ENST00000579238 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
CASC3-206ENST00000579238 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
CASC3-206ENST00000579238 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
CASC3-206ENST00000579238 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
CASC3-206ENST00000579238 LRP5O75197 1615 aa12.55□□□□□ -0.4
CASC3-206ENST00000579238 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
CASC3-206ENST00000579238 CRYBG1Q9Y4K1 1723 aa12.54□□□□□ -0.4
CASC3-206ENST00000579238 PSDA5PKW4 1024 aaPredicted RBP12.53□□□□□ -0.4
CASC3-206ENST00000579238 HRCP23327 699 aa12.53□□□□□ -0.4
CASC3-206ENST00000579238 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
CASC3-206ENST00000579238 NUDT16Q96DE0 195 aaKnown RBP12.53□□□□□ -0.4
CASC3-206ENST00000579238 DISP2A7MBM2 1401 aa12.53□□□□□ -0.4
CASC3-206ENST00000579238 ATP7BP35670 1465 aa12.53□□□□□ -0.4
CASC3-206ENST00000579238 THSD7AQ9UPZ6 1657 aa12.52□□□□□ -0.4
CASC3-206ENST00000579238 FAM182BQ5T319 152 aa12.52□□□□□ -0.41
CASC3-206ENST00000579238 SPATA31A1Q5TZJ5 1347 aa12.52□□□□□ -0.41
CASC3-206ENST00000579238 KIAA0232Q92628 1395 aa12.52□□□□□ -0.41
CASC3-206ENST00000579238 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
CASC3-206ENST00000579238 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
CASC3-206ENST00000579238 ARHGEF28Q8N1W1 1705 aaKnown RBP12.51□□□□□ -0.41
CASC3-206ENST00000579238 CHRNA2Q15822 529 aa12.5□□□□□ -0.41
CASC3-206ENST00000579238 FAM196AQ6ZSG2 479 aa12.5□□□□□ -0.41
CASC3-206ENST00000579238 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
CASC3-206ENST00000579238 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
CASC3-206ENST00000579238 ZC3H6P61129 1189 aaKnown RBP12.49□□□□□ -0.41
CASC3-206ENST00000579238 STRN4Q9NRL3 753 aa12.49□□□□□ -0.41
CASC3-206ENST00000579238 CCDC61Q9Y6R9 512 aa12.49□□□□□ -0.41
CASC3-206ENST00000579238 ACEP12821 1306 aa12.48□□□□□ -0.41
CASC3-206ENST00000579238 PLEKHG3A1L390 1219 aa12.48□□□□□ -0.41
CASC3-206ENST00000579238 R3HDM1Q15032 1099 aaKnown RBP12.48□□□□□ -0.41
CASC3-206ENST00000579238 EZH2Q15910 746 aaKnown RBP12.48□□□□□ -0.41
CASC3-206ENST00000579238 NBPF8Q3BBV2 869 aa12.48□□□□□ -0.41
CASC3-206ENST00000579238 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
CASC3-206ENST00000579238 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
CASC3-206ENST00000579238 TRIM37O94972 964 aa12.47□□□□□ -0.41
CASC3-206ENST00000579238 EVA1CP58658 441 aa12.47□□□□□ -0.41
CASC3-206ENST00000579238 BARGINQ6ZT62 677 aa12.47□□□□□ -0.41
CASC3-206ENST00000579238 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
CASC3-206ENST00000579238 TNS1Q9HBL0 1735 aaKnown RBP12.47□□□□□ -0.41
CASC3-206ENST00000579238 SSH2Q76I76 1423 aa12.46□□□□□ -0.41
CASC3-206ENST00000579238 PARD3Q8TEW0 1356 aa12.46□□□□□ -0.41
CASC3-206ENST00000579238 CPDO75976 1380 aa12.45□□□□□ -0.42
CASC3-206ENST00000579238 TOPAZ1Q8N9V7 1692 aa12.45□□□□□ -0.42
CASC3-206ENST00000579238 APBA3O96018 575 aa12.45□□□□□ -0.42
CASC3-206ENST00000579238 PDE3BQ13370 1112 aa12.45□□□□□ -0.42
CASC3-206ENST00000579238 ABTB2Q8N961 1025 aa12.45□□□□□ -0.42
CASC3-206ENST00000579238 USP35Q9P2H5 1018 aa12.45□□□□□ -0.42
CASC3-206ENST00000579238 USP19O94966 1318 aa12.44□□□□□ -0.42
CASC3-206ENST00000579238 LARP1Q6PKG0 1096 aaKnown RBP12.44□□□□□ -0.42
CASC3-206ENST00000579238 TCP11L2Q8N4U5 519 aa12.44□□□□□ -0.42
CASC3-206ENST00000579238 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
CASC3-206ENST00000579238 KIAA1210Q9ULL0 1709 aa12.43□□□□□ -0.42
CASC3-206ENST00000579238 CAMTA1Q9Y6Y1 1673 aa12.43□□□□□ -0.42
CASC3-206ENST00000579238 NLRP13Q86W25 1043 aa12.43□□□□□ -0.42
CASC3-206ENST00000579238 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
CASC3-206ENST00000579238 GCP02774 474 aa12.42□□□□□ -0.42
CASC3-206ENST00000579238 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
CASC3-206ENST00000579238 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
CASC3-206ENST00000579238 LMO7Q8WWI1 1683 aa12.42□□□□□ -0.42
CASC3-206ENST00000579238 SRPK2P78362 688 aaKnown RBP12.41□□□□□ -0.42
CASC3-206ENST00000579238 PPIP5K1Q6PFW1 1433 aa12.41□□□□□ -0.42
CASC3-206ENST00000579238 CENPJQ9HC77 1338 aaPredicted RBP12.4□□□□□ -0.42
CASC3-206ENST00000579238 C11orf95C9JLR9 678 aaPredicted RBP12.4□□□□□ -0.42
CASC3-206ENST00000579238 COL5A2P05997 1499 aaPredicted RBP12.4□□□□□ -0.43
CASC3-206ENST00000579238 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
CASC3-206ENST00000579238 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
CASC3-206ENST00000579238 RREB1Q92766 1687 aa12.38□□□□□ -0.43
CASC3-206ENST00000579238 CRB1P82279 1406 aa12.37□□□□□ -0.43
CASC3-206ENST00000579238 NLRP6P59044 892 aa12.37□□□□□ -0.43
CASC3-206ENST00000579238 AATKQ6ZMQ8 1374 aa12.37□□□□□ -0.43
CASC3-206ENST00000579238 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
CASC3-206ENST00000579238 PARP4Q9UKK3 1724 aaKnown RBP12.37□□□□□ -0.43
CASC3-206ENST00000579238 USP6P35125 1406 aa12.37□□□□□ -0.43
CASC3-206ENST00000579238 CABP1Q9NZU7 370 aa12.36□□□□□ -0.43
CASC3-206ENST00000579238 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
CASC3-206ENST00000579238 SLIT3O75094 1523 aa12.35□□□□□ -0.43
CASC3-206ENST00000579238 OVOS2A0A0G2JMS6 1433 aa12.35□□□□□ -0.43
CASC3-206ENST00000579238 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
CASC3-206ENST00000579238 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
CASC3-206ENST00000579238 SPON1Q9HCB6 807 aa12.34□□□□□ -0.43
CASC3-206ENST00000579238 QRICH2Q9H0J4 1663 aa12.33□□□□□ -0.44
CASC3-206ENST00000579238 PLSCR1O15162 318 aa12.33□□□□□ -0.44
CASC3-206ENST00000579238 DDB1Q16531 1140 aa12.33□□□□□ -0.44
CASC3-206ENST00000579238 TOM1L2Q6ZVM7 507 aa12.33□□□□□ -0.44
CASC3-206ENST00000579238 EVC2Q86UK5 1308 aa12.33□□□□□ -0.44
CASC3-206ENST00000579238 PEAK1Q9H792 1746 aa12.32□□□□□ -0.44
CASC3-206ENST00000579238 KCNQ2O43526 872 aa12.32□□□□□ -0.44
CASC3-206ENST00000579238 PPP1R1BQ9UD71 204 aaPredicted RBP12.32□□□□□ -0.44
CASC3-206ENST00000579238 WDR17Q8IZU2 1322 aa12.32□□□□□ -0.44
CASC3-206ENST00000579238 ARHGEF25Q86VW2 580 aa12.31□□□□□ -0.44
CASC3-206ENST00000579238 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
CASC3-206ENST00000579238 CDCA7Q9BWT1 371 aaPredicted RBP12.31□□□□□ -0.44
CASC3-206ENST00000579238 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
CASC3-206ENST00000579238 AXIN2Q9Y2T1 843 aa12.31□□□□□ -0.44
CASC3-206ENST00000579238 COL18A1P39060 1754 aa12.3□□□□□ -0.44
CASC3-206ENST00000579238 LRRC37A3O60309 1634 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms