RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 PTPRUQ92729 1446 aa13.09□□□□□ -0.31
RTTN-202ENST00000578780 NSD2O96028 1365 aa13.08□□□□□ -0.31
RTTN-202ENST00000578780 BLMP54132 1417 aaPredicted RBP13.08□□□□□ -0.32
RTTN-202ENST00000578780 AMOTL2Q9Y2J4 779 aa13.08□□□□□ -0.32
RTTN-202ENST00000578780 NPM2Q86SE8 214 aaKnown RBP13.07□□□□□ -0.32
RTTN-202ENST00000578780 NFKBIBQ15653 356 aa13.06□□□□□ -0.32
RTTN-202ENST00000578780 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
RTTN-202ENST00000578780 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
RTTN-202ENST00000578780 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
RTTN-202ENST00000578780 DIP2AQ14689 1571 aa13.06□□□□□ -0.32
RTTN-202ENST00000578780 FYB1O15117 783 aa13.05□□□□□ -0.32
RTTN-202ENST00000578780 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
RTTN-202ENST00000578780 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
RTTN-202ENST00000578780 POLR3AO14802 1390 aaPredicted RBP13.05□□□□□ -0.32
RTTN-202ENST00000578780 PDIA4P13667 645 aaKnown RBP13.05□□□□□ -0.32
RTTN-202ENST00000578780 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
RTTN-202ENST00000578780 ATP7BP35670 1465 aa13.05□□□□□ -0.32
RTTN-202ENST00000578780 HSP90AA1P07900 732 aaKnown RBP13.04□□□□□ -0.32
RTTN-202ENST00000578780 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
RTTN-202ENST00000578780 NCKAP5LQ9HCH0 1330 aa13.04□□□□□ -0.32
RTTN-202ENST00000578780 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
RTTN-202ENST00000578780 MTHFSP49914 203 aa13.04□□□□□ -0.32
RTTN-202ENST00000578780 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
RTTN-202ENST00000578780 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.03□□□□□ -0.32
RTTN-202ENST00000578780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.02□□□□□ -0.32
RTTN-202ENST00000578780 PTCH1Q13635 1447 aa13.02□□□□□ -0.32
RTTN-202ENST00000578780 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.33
RTTN-202ENST00000578780 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.33
RTTN-202ENST00000578780 ADGRB2O60241 1585 aa13.02□□□□□ -0.33
RTTN-202ENST00000578780 SETD1BQ9UPS6 1966 aaKnown RBP13.01□□□□□ -0.33
RTTN-202ENST00000578780 CFAP53Q96M91 514 aa13.01□□□□□ -0.33
RTTN-202ENST00000578780 CPSF1Q10570 1443 aaKnown RBP13.01□□□□□ -0.33
RTTN-202ENST00000578780 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
RTTN-202ENST00000578780 PDE3BQ13370 1112 aa13.01□□□□□ -0.33
RTTN-202ENST00000578780 PIK3R4Q99570 1358 aa13.01□□□□□ -0.33
RTTN-202ENST00000578780 KCNA6P17658 529 aa13□□□□□ -0.33
RTTN-202ENST00000578780 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
RTTN-202ENST00000578780 NAP1L5Q96NT1 182 aaPredicted RBP12.99□□□□□ -0.33
RTTN-202ENST00000578780 EDC4Q6P2E9 1401 aaKnown RBP12.99□□□□□ -0.33
RTTN-202ENST00000578780 XRN1Q8IZH2 1706 aaKnown RBP12.99□□□□□ -0.33
RTTN-202ENST00000578780 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
RTTN-202ENST00000578780 ANKRD26Q9UPS8 1709 aa12.98□□□□□ -0.33
RTTN-202ENST00000578780 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
RTTN-202ENST00000578780 CDCA7LQ96GN5 454 aa12.97□□□□□ -0.33
RTTN-202ENST00000578780 KIF20BQ96Q89 1820 aa12.97□□□□□ -0.33
RTTN-202ENST00000578780 APAF1O14727 1248 aa12.96□□□□□ -0.33
RTTN-202ENST00000578780 SHPRHQ149N8 1683 aa12.96□□□□□ -0.33
RTTN-202ENST00000578780 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.34
RTTN-202ENST00000578780 PDE4AP27815 886 aa12.96□□□□□ -0.34
RTTN-202ENST00000578780 NME9Q86XW9 330 aa12.96□□□□□ -0.34
RTTN-202ENST00000578780 ACEP12821 1306 aa12.95□□□□□ -0.34
RTTN-202ENST00000578780 NPHP4O75161 1426 aaPredicted RBP12.95□□□□□ -0.34
RTTN-202ENST00000578780 MON2Q7Z3U7 1717 aa12.94□□□□□ -0.34
RTTN-202ENST00000578780 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
RTTN-202ENST00000578780 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
RTTN-202ENST00000578780 ITSN1Q15811 1721 aa12.94□□□□□ -0.34
RTTN-202ENST00000578780 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
RTTN-202ENST00000578780 AKAP12Q02952 1782 aa12.94□□□□□ -0.34
RTTN-202ENST00000578780 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
RTTN-202ENST00000578780 FBLN1P23142 703 aa12.93□□□□□ -0.34
RTTN-202ENST00000578780 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.34
RTTN-202ENST00000578780 CALD1Q05682 793 aaKnown RBP12.93□□□□□ -0.34
RTTN-202ENST00000578780 ZNF521Q96K83 1311 aa12.93□□□□□ -0.34
RTTN-202ENST00000578780 NKTRP30414 1462 aaKnown RBP12.93□□□□□ -0.34
RTTN-202ENST00000578780 CHD2O14647 1828 aaKnown RBP12.93□□□□□ -0.34
RTTN-202ENST00000578780 PMFBP1Q8TBY8 1022 aa12.93□□□□□ -0.34
RTTN-202ENST00000578780 RUNDC1Q96C34 613 aa12.93□□□□□ -0.34
RTTN-202ENST00000578780 COG3Q96JB2 828 aa12.93□□□□□ -0.34
RTTN-202ENST00000578780 RGS3P49796 1198 aa12.92□□□□□ -0.34
RTTN-202ENST00000578780 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
RTTN-202ENST00000578780 TTC21BQ7Z4L5 1316 aa12.92□□□□□ -0.34
RTTN-202ENST00000578780 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
RTTN-202ENST00000578780 PNNQ9H307 717 aaKnown RBP12.91□□□□□ -0.34
RTTN-202ENST00000578780 USP6P35125 1406 aa12.91□□□□□ -0.34
RTTN-202ENST00000578780 U2SURPO15042 1029 aaKnown RBP12.91□□□□□ -0.34
RTTN-202ENST00000578780 AEBP2Q6ZN18 517 aaPredicted RBP12.91□□□□□ -0.34
RTTN-202ENST00000578780 NGEFQ8N5V2 710 aa12.91□□□□□ -0.34
RTTN-202ENST00000578780 RBM33Q96EV2 1170 aaKnown RBP12.91□□□□□ -0.34
RTTN-202ENST00000578780 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
RTTN-202ENST00000578780 RNF123Q5XPI4 1314 aa12.91□□□□□ -0.34
RTTN-202ENST00000578780 TCERG1O14776 1098 aaKnown RBP12.9□□□□□ -0.34
RTTN-202ENST00000578780 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
RTTN-202ENST00000578780 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
RTTN-202ENST00000578780 RCAN3Q9UKA8 241 aa12.9□□□□□ -0.34
RTTN-202ENST00000578780 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
RTTN-202ENST00000578780 ANKARQ7Z5J8 1434 aa12.89□□□□□ -0.35
RTTN-202ENST00000578780 TCP11L2Q8N4U5 519 aa12.89□□□□□ -0.35
RTTN-202ENST00000578780 FRAT2O75474 233 aaPredicted RBP12.89□□□□□ -0.35
RTTN-202ENST00000578780 CLCN1P35523 988 aa12.89□□□□□ -0.35
RTTN-202ENST00000578780 NEUROD2Q15784 382 aa12.88□□□□□ -0.35
RTTN-202ENST00000578780 DDRGK1Q96HY6 314 aa12.88□□□□□ -0.35
RTTN-202ENST00000578780 RRP7AQ9Y3A4 280 aaKnown RBP12.88□□□□□ -0.35
RTTN-202ENST00000578780 EMILIN1Q9Y6C2 1016 aa12.88□□□□□ -0.35
RTTN-202ENST00000578780 AATKQ6ZMQ8 1374 aa12.88□□□□□ -0.35
RTTN-202ENST00000578780 NRKQ7Z2Y5 1582 aa12.88□□□□□ -0.35
RTTN-202ENST00000578780 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
RTTN-202ENST00000578780 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
RTTN-202ENST00000578780 RGPD8O14715 1765 aaPredicted RBP12.87□□□□□ -0.35
RTTN-202ENST00000578780 SLC4A3P48751 1232 aa12.87□□□□□ -0.35
RTTN-202ENST00000578780 SSH2Q76I76 1423 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms