RNA–Protein interactions for RNA: ENST00000578618.5

EPB41L3-214, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 1 (best)

Gene EPB41L3, Length 4,908 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-214ENST00000578618 RNF187Q5TA31 235 aaPredicted RBP11.13□□□□□ -0.63
EPB41L3-214ENST00000578618 INCENPQ9NQS7 918 aa11.13□□□□□ -0.63
EPB41L3-214ENST00000578618 GTF3C6Q969F1 213 aa11.13□□□□□ -0.63
EPB41L3-214ENST00000578618 CAPN2P17655 700 aa11.13□□□□□ -0.63
EPB41L3-214ENST00000578618 ARID4AP29374 1257 aaPredicted RBP11.13□□□□□ -0.63
EPB41L3-214ENST00000578618 STK31Q9BXU1 1019 aa11.13□□□□□ -0.63
EPB41L3-214ENST00000578618 CEP135Q66GS9 1140 aa11.13□□□□□ -0.63
EPB41L3-214ENST00000578618 SRRTQ9BXP5 876 aaKnown RBP11.13□□□□□ -0.63
EPB41L3-214ENST00000578618 BAG4O95429 457 aaKnown RBP11.12□□□□□ -0.63
EPB41L3-214ENST00000578618 NCBP3Q53F19 620 aaKnown RBP11.12□□□□□ -0.63
EPB41L3-214ENST00000578618 MRVI1Q9Y6F6 885 aa11.12□□□□□ -0.63
EPB41L3-214ENST00000578618 SDF4Q9BRK5 362 aa11.12□□□□□ -0.63
EPB41L3-214ENST00000578618 TNMDQ9H2S6 317 aa11.12□□□□□ -0.63
EPB41L3-214ENST00000578618 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.12□□□□□ -0.63
EPB41L3-214ENST00000578618 ST20-MTHFSA0A0A6YYL1 179 aa11.11□□□□□ -0.63
EPB41L3-214ENST00000578618 ZBTB22O15209 634 aa11.11□□□□□ -0.63
EPB41L3-214ENST00000578618 ATP6V1AP38606 617 aa11.11□□□□□ -0.63
EPB41L3-214ENST00000578618 RPAINQ86UA6 219 aa11.11□□□□□ -0.63
EPB41L3-214ENST00000578618 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
EPB41L3-214ENST00000578618 PNISRQ8TF01 805 aaKnown RBP11.11□□□□□ -0.63
EPB41L3-214ENST00000578618 MYO6Q9UM54 1294 aa11.11□□□□□ -0.63
EPB41L3-214ENST00000578618 BCAR3O75815 825 aa11.11□□□□□ -0.63
EPB41L3-214ENST00000578618 C20orf194Q5TEA3 1177 aa11.11□□□□□ -0.63
EPB41L3-214ENST00000578618 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 LRSAM1Q6UWE0 723 aa11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 TMCO5BA8MYB1 307 aa11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 NEBLO76041 1014 aa11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 KIAA1328Q86T90 577 aa11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 SMARCC1Q92922 1105 aaPredicted RBP11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 PANK3Q9H999 370 aa11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 CRACR2AQ9BSW2 395 aa11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 SENP3Q9H4L4 574 aaPredicted RBP11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 SOX12O15370 315 aa11.1□□□□□ -0.63
EPB41L3-214ENST00000578618 JAKMIP3Q5VZ66 844 aa11.09□□□□□ -0.63
EPB41L3-214ENST00000578618 BCL2L12Q9HB09 334 aa11.09□□□□□ -0.63
EPB41L3-214ENST00000578618 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
EPB41L3-214ENST00000578618 LIG1P18858 919 aa11.09□□□□□ -0.63
EPB41L3-214ENST00000578618 WDR33Q9C0J8 1336 aaKnown RBP11.09□□□□□ -0.63
EPB41L3-214ENST00000578618 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
EPB41L3-214ENST00000578618 NAA25Q14CX7 972 aa11.09□□□□□ -0.63
EPB41L3-214ENST00000578618 GOLGA6L10A6NI86 522 aa11.09□□□□□ -0.63
EPB41L3-214ENST00000578618 TBC1D32Q96NH3 1257 aa11.09□□□□□ -0.63
EPB41L3-214ENST00000578618 GBP3Q9H0R5 595 aa11.09□□□□□ -0.63
EPB41L3-214ENST00000578618 C8orf34Q49A92 452 aa11.08□□□□□ -0.64
EPB41L3-214ENST00000578618 CLIP2Q9UDT6 1046 aa11.08□□□□□ -0.64
EPB41L3-214ENST00000578618 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.08□□□□□ -0.64
EPB41L3-214ENST00000578618 BRD4O60885 1362 aaPredicted RBP11.08□□□□□ -0.64
EPB41L3-214ENST00000578618 PDE3AQ14432 1141 aa11.08□□□□□ -0.64
EPB41L3-214ENST00000578618 FMN1Q68DA7 1419 aa11.08□□□□□ -0.64
EPB41L3-214ENST00000578618 MCM2P49736 904 aa11.08□□□□□ -0.64
EPB41L3-214ENST00000578618 KINO60870 393 aaKnown RBP11.07□□□□□ -0.64
EPB41L3-214ENST00000578618 PPP2R5AQ15172 486 aa11.07□□□□□ -0.64
EPB41L3-214ENST00000578618 CCDC183Q5T5S1 534 aa11.07□□□□□ -0.64
EPB41L3-214ENST00000578618 MICALCLQ6ZW33 695 aa11.07□□□□□ -0.64
EPB41L3-214ENST00000578618 NUP62CLQ9H1M0 184 aa11.07□□□□□ -0.64
EPB41L3-214ENST00000578618 A0A1B0GUA9 196 aa11.07□□□□□ -0.64
EPB41L3-214ENST00000578618 SLC4A10Q6U841 1118 aa11.07□□□□□ -0.64
EPB41L3-214ENST00000578618 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
EPB41L3-214ENST00000578618 EZRP15311 586 aaKnown RBP11.07□□□□□ -0.64
EPB41L3-214ENST00000578618 HCLS1P14317 486 aaPredicted RBP11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 PKD2Q13563 968 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 USP47Q96K76 1375 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 ENOX2Q16206 610 aaKnown RBP11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 UVSSAQ2YD98 709 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 PPM1EQ8WY54 764 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 DHX8Q14562 1220 aaKnown RBP11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 ADAMTS8Q9UP79 889 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 LOC102724159A0A0B4J2E5 919 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 SMTNL1A8MU46 457 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 ELL2O00472 640 aaPredicted RBP11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 FOSBP53539 338 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 PWP2Q15269 919 aaKnown RBP11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 CAMK4Q16566 473 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 AP1ARQ63HQ0 302 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 ARFGAP3Q9NP61 516 aa11.06□□□□□ -0.64
EPB41L3-214ENST00000578618 SLU7O95391 586 aaKnown RBP11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 MCM6Q14566 821 aa11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 C17orf53Q8N3J3 647 aaPredicted RBP11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 SFPQP23246 707 aaKnown RBP eCLIP11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 MAP3K11Q16584 847 aa11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 PCMTD1Q96MG8 357 aaPredicted RBP11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 NINLQ9Y2I6 1382 aa11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 SERPINC1P01008 464 aa11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 HMGB1P09429 215 aaKnown RBP11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 SETSIPP0DME0 302 aa11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 SNW1Q13573 536 aaKnown RBP11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 ZKSCAN1P17029 563 aaPredicted RBP11.05□□□□□ -0.64
EPB41L3-214ENST00000578618 NAP1L1P55209 391 aaKnown RBP11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 NUP133Q8WUM0 1156 aa11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 ZRSR2Q15696 482 aaKnown RBP11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 ODF2Q5BJF6 829 aa11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 VPS18Q9P253 973 aa11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 ARHGAP35Q9NRY4 1499 aa11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 RASSF8Q8NHQ8 419 aa11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 CHMP4CQ96CF2 233 aa11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 GDPD2Q9HCC8 539 aa11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 ZNF500O60304 480 aaPredicted RBP11.04□□□□□ -0.64
EPB41L3-214ENST00000578618 CLNS1AP54105 237 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms