RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 FKBPLQ9UIM3 349 aa7.87□□□□□ -1.15
KRT39-202ENST00000578029 GNEQ9Y223 722 aaKnown RBP7.87□□□□□ -1.15
KRT39-202ENST00000578029 ZC3H4Q9UPT8 1303 aaKnown RBP7.86□□□□□ -1.15
KRT39-202ENST00000578029 E9PSI1 815 aa7.86□□□□□ -1.15
KRT39-202ENST00000578029 ZFRQ96KR1 1074 aaKnown RBP7.86□□□□□ -1.15
KRT39-202ENST00000578029 USB1Q9BQ65 265 aaKnown RBP7.86□□□□□ -1.15
KRT39-202ENST00000578029 ZNF592Q92610 1267 aa7.85□□□□□ -1.15
KRT39-202ENST00000578029 AXIN2Q9Y2T1 843 aa7.85□□□□□ -1.15
KRT39-202ENST00000578029 SALL2Q9Y467 1007 aaPredicted RBP7.85□□□□□ -1.15
KRT39-202ENST00000578029 SKIP12755 728 aa7.84□□□□□ -1.15
KRT39-202ENST00000578029 PLEKHM2Q8IWE5 1019 aa7.84□□□□□ -1.15
KRT39-202ENST00000578029 CDAN1Q8IWY9 1227 aa7.84□□□□□ -1.15
KRT39-202ENST00000578029 CCER1Q8TC90 406 aaPredicted RBP7.84□□□□□ -1.15
KRT39-202ENST00000578029 ZNF428Q96B54 188 aa7.84□□□□□ -1.15
KRT39-202ENST00000578029 LRCH3Q96II8 777 aa7.84□□□□□ -1.15
KRT39-202ENST00000578029 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
KRT39-202ENST00000578029 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
KRT39-202ENST00000578029 USP17L3A6NCW0 530 aa7.83□□□□□ -1.16
KRT39-202ENST00000578029 USP17L4A6NCW7 530 aa7.83□□□□□ -1.16
KRT39-202ENST00000578029 BHMG1C9JSJ3 638 aaPredicted RBP7.83□□□□□ -1.16
KRT39-202ENST00000578029 PIK3CDO00329 1044 aa7.83□□□□□ -1.16
KRT39-202ENST00000578029 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
KRT39-202ENST00000578029 USP17L1Q7RTZ2 530 aa7.83□□□□□ -1.16
KRT39-202ENST00000578029 NOVA2Q9UNW9 492 aaKnown RBP7.83□□□□□ -1.16
KRT39-202ENST00000578029 FAM196BA6NMK8 535 aa7.82□□□□□ -1.16
KRT39-202ENST00000578029 USP17L5A8MUK1 530 aa7.82□□□□□ -1.16
KRT39-202ENST00000578029 F12P00748 615 aaPredicted RBP7.82□□□□□ -1.16
KRT39-202ENST00000578029 MCCD1P59942 119 aaPredicted RBP7.82□□□□□ -1.16
KRT39-202ENST00000578029 TMEM164Q5U3C3 297 aa7.82□□□□□ -1.16
KRT39-202ENST00000578029 BRICD5Q6PL45 260 aa7.82□□□□□ -1.16
KRT39-202ENST00000578029 BLOC1S3Q6QNY0 202 aa7.82□□□□□ -1.16
KRT39-202ENST00000578029 RNF19BQ6ZMZ0 732 aa7.82□□□□□ -1.16
KRT39-202ENST00000578029 MRPL50Q8N5N7 158 aaKnown RBP7.82□□□□□ -1.16
KRT39-202ENST00000578029 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.82□□□□□ -1.16
KRT39-202ENST00000578029 ZMIZ1Q9ULJ6 1067 aa7.82□□□□□ -1.16
KRT39-202ENST00000578029 FMNL1O95466 1100 aaPredicted RBP7.81□□□□□ -1.16
KRT39-202ENST00000578029 PTPRNQ16849 979 aa7.81□□□□□ -1.16
KRT39-202ENST00000578029 STK32AQ8WU08 396 aa7.81□□□□□ -1.16
KRT39-202ENST00000578029 TK2O00142 265 aa7.8□□□□□ -1.16
KRT39-202ENST00000578029 LZTS3O60299 673 aaPredicted RBP7.8□□□□□ -1.16
KRT39-202ENST00000578029 JUNDP17535 347 aa7.8□□□□□ -1.16
KRT39-202ENST00000578029 SLFNL1Q499Z3 407 aa7.8□□□□□ -1.16
KRT39-202ENST00000578029 LARP1Q6PKG0 1096 aaKnown RBP7.8□□□□□ -1.16
KRT39-202ENST00000578029 ARMC2Q8NEN0 867 aa7.8□□□□□ -1.16
KRT39-202ENST00000578029 MKRN1Q9UHC7 482 aaKnown RBP7.8□□□□□ -1.16
KRT39-202ENST00000578029 MYT1LQ9UL68 1186 aa7.8□□□□□ -1.16
KRT39-202ENST00000578029 GPSM3Q9Y4H4 160 aa7.8□□□□□ -1.16
KRT39-202ENST00000578029 ATP5J2-PTCD1G3V325 749 aa7.79□□□□□ -1.16
KRT39-202ENST00000578029 ARID4AP29374 1257 aaPredicted RBP7.79□□□□□ -1.16
KRT39-202ENST00000578029 CTHP32929 405 aa7.79□□□□□ -1.16
KRT39-202ENST00000578029 PTK2Q05397 1052 aa7.79□□□□□ -1.16
KRT39-202ENST00000578029 TXNDC2Q86VQ3 553 aa7.79□□□□□ -1.16
KRT39-202ENST00000578029 GPKOWQ92917 476 aaPredicted RBP eCLIP7.79□□□□□ -1.16
KRT39-202ENST00000578029 USP17L15C9J2P7 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L10C9JJH3 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L13C9JLJ4 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L12C9JPN9 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L11C9JVI0 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L21D6R901 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L18D6R9N7 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L22D6RA61 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L17D6RBQ6 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L19D6RCP7 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L20D6RJB6 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 NR1I2O75469 434 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 PPP4CP60510 307 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 USP17L24Q0WX57 530 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 SCUBE3Q8IX30 993 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 DEPDC4Q8N2C3 294 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 FAM174AQ8TBP5 190 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 PCDH10Q9P2E7 1040 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 MAP10Q9P2G4 905 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 CEP126Q9P2H0 1117 aa7.78□□□□□ -1.16
KRT39-202ENST00000578029 RASA1P20936 1047 aa7.77□□□□□ -1.17
KRT39-202ENST00000578029 SSFA2P28290 1259 aa7.77□□□□□ -1.17
KRT39-202ENST00000578029 PDXDC2PQ6P474 469 aa7.77□□□□□ -1.17
KRT39-202ENST00000578029 RNF135Q8IUD6 432 aa7.77□□□□□ -1.17
KRT39-202ENST00000578029 FAM200AQ8TCP9 573 aa7.77□□□□□ -1.17
KRT39-202ENST00000578029 CDCA7Q9BWT1 371 aaPredicted RBP7.77□□□□□ -1.17
KRT39-202ENST00000578029 PTK7Q13308 1070 aa7.76□□□□□ -1.17
KRT39-202ENST00000578029 NCOA4Q13772 614 aa7.76□□□□□ -1.17
KRT39-202ENST00000578029 CRTC2Q53ET0 693 aaPredicted RBP7.76□□□□□ -1.17
KRT39-202ENST00000578029 NBPF14Q5TI25 921 aa7.76□□□□□ -1.17
KRT39-202ENST00000578029 ANKK1Q8NFD2 765 aa7.76□□□□□ -1.17
KRT39-202ENST00000578029 THAP11Q96EK4 314 aa7.76□□□□□ -1.17
KRT39-202ENST00000578029 PCDHB3Q9Y5E6 796 aa7.76□□□□□ -1.17
KRT39-202ENST00000578029 ERCC3P19447 782 aa7.75□□□□□ -1.17
KRT39-202ENST00000578029 LSM11P83369 360 aaKnown RBP eCLIP7.75□□□□□ -1.17
KRT39-202ENST00000578029 MAP7D1Q3KQU3 841 aa7.75□□□□□ -1.17
KRT39-202ENST00000578029 PHLDB3Q6NSJ2 640 aa7.75□□□□□ -1.17
KRT39-202ENST00000578029 PLPP7Q8NBV4 271 aa7.75□□□□□ -1.17
KRT39-202ENST00000578029 CLP1Q92989 425 aaKnown RBP7.75□□□□□ -1.17
KRT39-202ENST00000578029 EVA1BQ9NVM1 165 aa7.75□□□□□ -1.17
KRT39-202ENST00000578029 PCDHB9Q9Y5E1 797 aa7.75□□□□□ -1.17
KRT39-202ENST00000578029 GOLGA8CPA6NN73 597 aa7.74□□□□□ -1.17
KRT39-202ENST00000578029 CCNYL3P0C7X3 344 aa7.74□□□□□ -1.17
KRT39-202ENST00000578029 EML3Q32P44 896 aa7.74□□□□□ -1.17
KRT39-202ENST00000578029 MSS51Q4VC12 460 aa7.74□□□□□ -1.17
KRT39-202ENST00000578029 ANKMY2Q8IV38 441 aa7.74□□□□□ -1.17
KRT39-202ENST00000578029 PHTF2Q8N3S3 785 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms