RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 RGPD1P0DJD0 1748 aa24.3■■□□□ 1.48
CTDNEP1-211ENST00000575783 MPHOSPH9Q99550 1183 aa24.29■■□□□ 1.48
CTDNEP1-211ENST00000575783 IFT172Q9UG01 1749 aa24.29■■□□□ 1.48
CTDNEP1-211ENST00000575783 NRAPQ86VF7 1730 aa24.28■■□□□ 1.48
CTDNEP1-211ENST00000575783 STRN4Q9NRL3 753 aa24.27■■□□□ 1.48
CTDNEP1-211ENST00000575783 ACIN1Q9UKV3 1341 aaKnown RBP24.27■■□□□ 1.48
CTDNEP1-211ENST00000575783 ANKARQ7Z5J8 1434 aa24.27■■□□□ 1.48
CTDNEP1-211ENST00000575783 SPATA31A1Q5TZJ5 1347 aa24.26■■□□□ 1.47
CTDNEP1-211ENST00000575783 COL14A1Q05707 1796 aaKnown RBP24.25■■□□□ 1.47
CTDNEP1-211ENST00000575783 NGDNQ8NEJ9 315 aaKnown RBP24.25■■□□□ 1.47
CTDNEP1-211ENST00000575783 CHRNA2Q15822 529 aa24.24■■□□□ 1.47
CTDNEP1-211ENST00000575783 NBPF8Q3BBV2 869 aa24.24■■□□□ 1.47
CTDNEP1-211ENST00000575783 NBPF14Q5TI25 921 aa24.24■■□□□ 1.47
CTDNEP1-211ENST00000575783 USP35Q9P2H5 1018 aa24.24■■□□□ 1.47
CTDNEP1-211ENST00000575783 PPP1R1BQ9UD71 204 aaPredicted RBP24.24■■□□□ 1.47
CTDNEP1-211ENST00000575783 MINK1Q8N4C8 1332 aaPredicted RBP24.23■■□□□ 1.47
CTDNEP1-211ENST00000575783 PRR36Q9H6K5 1346 aa24.22■■□□□ 1.47
CTDNEP1-211ENST00000575783 PDE3BQ13370 1112 aa24.22■■□□□ 1.47
CTDNEP1-211ENST00000575783 TRAK1Q9UPV9 953 aa24.22■■□□□ 1.47
CTDNEP1-211ENST00000575783 PARD3Q8TEW0 1356 aa24.21■■□□□ 1.47
CTDNEP1-211ENST00000575783 DCAF8L1A6NGE4 600 aa24.21■■□□□ 1.47
CTDNEP1-211ENST00000575783 THSD7AQ9UPZ6 1657 aa24.21■■□□□ 1.47
CTDNEP1-211ENST00000575783 KIAA0232Q92628 1395 aa24.2■■□□□ 1.46
CTDNEP1-211ENST00000575783 TNS1Q9HBL0 1735 aaKnown RBP24.2■■□□□ 1.46
CTDNEP1-211ENST00000575783 EVA1CP58658 441 aa24.19■■□□□ 1.46
CTDNEP1-211ENST00000575783 ZC3H6P61129 1189 aaKnown RBP24.19■■□□□ 1.46
CTDNEP1-211ENST00000575783 ADGRB2O60241 1585 aa24.19■■□□□ 1.46
CTDNEP1-211ENST00000575783 SPON1Q9HCB6 807 aa24.18■■□□□ 1.46
CTDNEP1-211ENST00000575783 TRPM3Q9HCF6 1732 aaPredicted RBP24.18■■□□□ 1.46
CTDNEP1-211ENST00000575783 WASLO00401 505 aaPredicted RBP24.16■■□□□ 1.46
CTDNEP1-211ENST00000575783 NUTM2GQ5VZR2 741 aa24.16■■□□□ 1.46
CTDNEP1-211ENST00000575783 EIF3AQ14152 1382 aaKnown RBP24.16■■□□□ 1.46
CTDNEP1-211ENST00000575783 ALS2Q96Q42 1657 aa24.15■■□□□ 1.46
CTDNEP1-211ENST00000575783 KCNQ2O43526 872 aa24.14■■□□□ 1.45
CTDNEP1-211ENST00000575783 DLC1Q96QB1 1528 aa24.13■■□□□ 1.45
CTDNEP1-211ENST00000575783 BARGINQ6ZT62 677 aa24.12■■□□□ 1.45
CTDNEP1-211ENST00000575783 LARP1Q6PKG0 1096 aaKnown RBP24.1■■□□□ 1.45
CTDNEP1-211ENST00000575783 TCP11L2Q8N4U5 519 aa24.09■■□□□ 1.45
CTDNEP1-211ENST00000575783 TULP4Q9NRJ4 1543 aa24.09■■□□□ 1.45
CTDNEP1-211ENST00000575783 NUDT16Q96DE0 195 aaKnown RBP24.08■■□□□ 1.45
CTDNEP1-211ENST00000575783 KDM2AQ9Y2K7 1162 aa24.07■■□□□ 1.44
CTDNEP1-211ENST00000575783 NINLQ9Y2I6 1382 aa24.06■■□□□ 1.44
CTDNEP1-211ENST00000575783 SSH2Q76I76 1423 aa24.06■■□□□ 1.44
CTDNEP1-211ENST00000575783 CRYBG1Q9Y4K1 1723 aa24.04■■□□□ 1.44
CTDNEP1-211ENST00000575783 ADGRB1O14514 1584 aa24.03■■□□□ 1.44
CTDNEP1-211ENST00000575783 RREB1Q92766 1687 aa24.02■■□□□ 1.44
CTDNEP1-211ENST00000575783 UTRNP46939 3433 aa24.01■■□□□ 1.43
CTDNEP1-211ENST00000575783 NUP188Q5SRE5 1749 aa24.01■■□□□ 1.43
CTDNEP1-211ENST00000575783 ABTB2Q8N961 1025 aa24.01■■□□□ 1.43
CTDNEP1-211ENST00000575783 THRAP3Q9Y2W1 955 aaKnown RBP24■■□□□ 1.43
CTDNEP1-211ENST00000575783 DCAF11Q8TEB1 546 aa23.99■■□□□ 1.43
CTDNEP1-211ENST00000575783 CDK19Q9BWU1 502 aa23.99■■□□□ 1.43
CTDNEP1-211ENST00000575783 CAMTA1Q9Y6Y1 1673 aa23.99■■□□□ 1.43
CTDNEP1-211ENST00000575783 ACEP12821 1306 aa23.98■■□□□ 1.43
CTDNEP1-211ENST00000575783 C11orf95C9JLR9 678 aaPredicted RBP23.97■■□□□ 1.43
CTDNEP1-211ENST00000575783 ATP7BP35670 1465 aa23.97■■□□□ 1.43
CTDNEP1-211ENST00000575783 ANO8Q9HCE9 1232 aaPredicted RBP23.97■■□□□ 1.43
CTDNEP1-211ENST00000575783 ZBTB7AO95365 584 aa23.96■■□□□ 1.43
CTDNEP1-211ENST00000575783 ZNF784Q8NCA9 323 aaPredicted RBP23.96■■□□□ 1.43
CTDNEP1-211ENST00000575783 PDGFDQ9GZP0 370 aaPredicted RBP23.96■■□□□ 1.43
CTDNEP1-211ENST00000575783 ZBTB7CA1YPR0 619 aa23.95■■□□□ 1.42
CTDNEP1-211ENST00000575783 PLSCR1O15162 318 aa23.95■■□□□ 1.42
CTDNEP1-211ENST00000575783 BCL11BQ9C0K0 894 aaPredicted RBP23.95■■□□□ 1.42
CTDNEP1-211ENST00000575783 PHRF1Q9P1Y6 1649 aaKnown RBP23.95■■□□□ 1.42
CTDNEP1-211ENST00000575783 CCDC61Q9Y6R9 512 aa23.94■■□□□ 1.42
CTDNEP1-211ENST00000575783 CPDO75976 1380 aa23.93■■□□□ 1.42
CTDNEP1-211ENST00000575783 GCP02774 474 aa23.93■■□□□ 1.42
CTDNEP1-211ENST00000575783 ATF5Q9Y2D1 282 aaPredicted RBP23.93■■□□□ 1.42
CTDNEP1-211ENST00000575783 PTF1AQ7RTS3 328 aa23.92■■□□□ 1.42
CTDNEP1-211ENST00000575783 POLR3AO14802 1390 aaPredicted RBP23.91■■□□□ 1.42
CTDNEP1-211ENST00000575783 NLRP13Q86W25 1043 aa23.91■■□□□ 1.42
CTDNEP1-211ENST00000575783 OVOS2A0A0G2JMS6 1433 aa23.91■■□□□ 1.42
CTDNEP1-211ENST00000575783 OVOS2A0A0J9YW53 1432 aa23.91■■□□□ 1.42
CTDNEP1-211ENST00000575783 OVOS2Q6IE36 1432 aa23.91■■□□□ 1.42
CTDNEP1-211ENST00000575783 PLEKHG3A1L390 1219 aa23.9■■□□□ 1.42
CTDNEP1-211ENST00000575783 DDB1Q16531 1140 aa23.9■■□□□ 1.42
CTDNEP1-211ENST00000575783 USP19O94966 1318 aa23.89■■□□□ 1.42
CTDNEP1-211ENST00000575783 SENP3-EIF4A1A0A087X0R7 540 aa23.89■■□□□ 1.41
CTDNEP1-211ENST00000575783 PTGER2P43116 358 aa23.88■■□□□ 1.41
CTDNEP1-211ENST00000575783 PROM2Q8N271 834 aa23.88■■□□□ 1.41
CTDNEP1-211ENST00000575783 COL5A2P05997 1499 aaPredicted RBP23.87■■□□□ 1.41
CTDNEP1-211ENST00000575783 NRKQ7Z2Y5 1582 aa23.86■■□□□ 1.41
CTDNEP1-211ENST00000575783 CRB1P82279 1406 aa23.86■■□□□ 1.41
CTDNEP1-211ENST00000575783 TOM1L2Q6ZVM7 507 aa23.85■■□□□ 1.41
CTDNEP1-211ENST00000575783 SYT17Q9BSW7 474 aa23.85■■□□□ 1.41
CTDNEP1-211ENST00000575783 FHDC1Q9C0D6 1143 aaPredicted RBP23.85■■□□□ 1.41
CTDNEP1-211ENST00000575783 ITSN1Q15811 1721 aa23.84■■□□□ 1.41
CTDNEP1-211ENST00000575783 LMO7Q8WWI1 1683 aa23.84■■□□□ 1.41
CTDNEP1-211ENST00000575783 STAC3Q96MF2 364 aa23.84■■□□□ 1.41
CTDNEP1-211ENST00000575783 STK32BQ9NY57 414 aa23.84■■□□□ 1.41
CTDNEP1-211ENST00000575783 MARCH10Q8NA82 808 aaPredicted RBP23.82■■□□□ 1.4
CTDNEP1-211ENST00000575783 PARP4Q9UKK3 1724 aaKnown RBP23.81■■□□□ 1.4
CTDNEP1-211ENST00000575783 C1QTNF8P60827 252 aa23.81■■□□□ 1.4
CTDNEP1-211ENST00000575783 SRPK2P78362 688 aaKnown RBP23.81■■□□□ 1.4
CTDNEP1-211ENST00000575783 TXNRD1Q16881 649 aa23.81■■□□□ 1.4
CTDNEP1-211ENST00000575783 NLRP6P59044 892 aa23.8■■□□□ 1.4
CTDNEP1-211ENST00000575783 SLC15A2Q16348 729 aa23.8■■□□□ 1.4
CTDNEP1-211ENST00000575783 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
CTDNEP1-211ENST00000575783 PEAK1Q9H792 1746 aa23.78■■□□□ 1.4
CTDNEP1-211ENST00000575783 CASZ1Q86V15 1759 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 1065 ms