RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 TRAK1Q9UPV9 953 aa14.79□□□□□ -0.04
CALCOCO2-227ENST00000575560 ADGRB1O14514 1584 aa14.78□□□□□ -0.04
CALCOCO2-227ENST00000575560 WASLO00401 505 aaPredicted RBP14.78□□□□□ -0.04
CALCOCO2-227ENST00000575560 COL14A1Q05707 1796 aaKnown RBP14.78□□□□□ -0.04
CALCOCO2-227ENST00000575560 ALS2Q96Q42 1657 aa14.77□□□□□ -0.04
CALCOCO2-227ENST00000575560 DISP2A7MBM2 1401 aa14.77□□□□□ -0.04
CALCOCO2-227ENST00000575560 PIAS4Q8N2W9 510 aaPredicted RBP14.77□□□□□ -0.05
CALCOCO2-227ENST00000575560 EIF3AQ14152 1382 aaKnown RBP14.76□□□□□ -0.05
CALCOCO2-227ENST00000575560 MINK1Q8N4C8 1332 aaPredicted RBP14.76□□□□□ -0.05
CALCOCO2-227ENST00000575560 R3HDM1Q15032 1099 aaKnown RBP14.76□□□□□ -0.05
CALCOCO2-227ENST00000575560 SPATA31A1Q5TZJ5 1347 aa14.75□□□□□ -0.05
CALCOCO2-227ENST00000575560 EZH2Q15910 746 aaKnown RBP14.75□□□□□ -0.05
CALCOCO2-227ENST00000575560 NGDNQ8NEJ9 315 aaKnown RBP14.75□□□□□ -0.05
CALCOCO2-227ENST00000575560 CAMKK2Q96RR4 588 aa14.75□□□□□ -0.05
CALCOCO2-227ENST00000575560 PRDM11Q9NQV5 511 aa14.75□□□□□ -0.05
CALCOCO2-227ENST00000575560 TULP4Q9NRJ4 1543 aa14.75□□□□□ -0.05
CALCOCO2-227ENST00000575560 THSD7AQ9UPZ6 1657 aa14.74□□□□□ -0.05
CALCOCO2-227ENST00000575560 PAK3O75914 559 aaPredicted RBP14.74□□□□□ -0.05
CALCOCO2-227ENST00000575560 RGPD1P0DJD0 1748 aa14.73□□□□□ -0.05
CALCOCO2-227ENST00000575560 FAM196AQ6ZSG2 479 aa14.73□□□□□ -0.05
CALCOCO2-227ENST00000575560 KIAA0232Q92628 1395 aa14.73□□□□□ -0.05
CALCOCO2-227ENST00000575560 CRYBG1Q9Y4K1 1723 aa14.72□□□□□ -0.05
CALCOCO2-227ENST00000575560 TRIM37O94972 964 aa14.72□□□□□ -0.05
CALCOCO2-227ENST00000575560 CHRNA2Q15822 529 aa14.71□□□□□ -0.05
CALCOCO2-227ENST00000575560 NUDT16Q96DE0 195 aaKnown RBP14.71□□□□□ -0.05
CALCOCO2-227ENST00000575560 STAC3Q96MF2 364 aa14.71□□□□□ -0.05
CALCOCO2-227ENST00000575560 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.05
CALCOCO2-227ENST00000575560 DCAF11Q8TEB1 546 aa14.7□□□□□ -0.06
CALCOCO2-227ENST00000575560 TNS1Q9HBL0 1735 aaKnown RBP14.69□□□□□ -0.06
CALCOCO2-227ENST00000575560 APBA3O96018 575 aa14.69□□□□□ -0.06
CALCOCO2-227ENST00000575560 BARGINQ6ZT62 677 aa14.69□□□□□ -0.06
CALCOCO2-227ENST00000575560 STRN4Q9NRL3 753 aa14.69□□□□□ -0.06
CALCOCO2-227ENST00000575560 PARD3Q8TEW0 1356 aa14.69□□□□□ -0.06
CALCOCO2-227ENST00000575560 ZC3H6P61129 1189 aaKnown RBP14.68□□□□□ -0.06
CALCOCO2-227ENST00000575560 ATP7BP35670 1465 aa14.67□□□□□ -0.06
CALCOCO2-227ENST00000575560 POLR3AO14802 1390 aaPredicted RBP14.66□□□□□ -0.06
CALCOCO2-227ENST00000575560 RAB3GAP2Q9H2M9 1393 aa14.66□□□□□ -0.06
CALCOCO2-227ENST00000575560 NBPF8Q3BBV2 869 aa14.66□□□□□ -0.06
CALCOCO2-227ENST00000575560 NUTM2GQ5VZR2 741 aa14.66□□□□□ -0.06
CALCOCO2-227ENST00000575560 CDK19Q9BWU1 502 aa14.66□□□□□ -0.06
CALCOCO2-227ENST00000575560 USP35Q9P2H5 1018 aa14.66□□□□□ -0.06
CALCOCO2-227ENST00000575560 ACEP12821 1306 aa14.66□□□□□ -0.06
CALCOCO2-227ENST00000575560 PLEKHG3A1L390 1219 aa14.65□□□□□ -0.06
CALCOCO2-227ENST00000575560 EVA1CP58658 441 aa14.65□□□□□ -0.06
CALCOCO2-227ENST00000575560 PDE3BQ13370 1112 aa14.65□□□□□ -0.06
CALCOCO2-227ENST00000575560 CCDC61Q9Y6R9 512 aa14.65□□□□□ -0.06
CALCOCO2-227ENST00000575560 SSH2Q76I76 1423 aa14.65□□□□□ -0.06
CALCOCO2-227ENST00000575560 LARP1Q6PKG0 1096 aaKnown RBP14.64□□□□□ -0.07
CALCOCO2-227ENST00000575560 CPDO75976 1380 aa14.63□□□□□ -0.07
CALCOCO2-227ENST00000575560 TCP11L2Q8N4U5 519 aa14.63□□□□□ -0.07
CALCOCO2-227ENST00000575560 THRAP3Q9Y2W1 955 aaKnown RBP14.63□□□□□ -0.07
CALCOCO2-227ENST00000575560 PHRF1Q9P1Y6 1649 aaKnown RBP14.63□□□□□ -0.07
CALCOCO2-227ENST00000575560 CAMTA1Q9Y6Y1 1673 aa14.62□□□□□ -0.07
CALCOCO2-227ENST00000575560 NBPF14Q5TI25 921 aa14.62□□□□□ -0.07
CALCOCO2-227ENST00000575560 ABTB2Q8N961 1025 aa14.62□□□□□ -0.07
CALCOCO2-227ENST00000575560 USP19O94966 1318 aa14.62□□□□□ -0.07
CALCOCO2-227ENST00000575560 ITSN1Q15811 1721 aa14.61□□□□□ -0.07
CALCOCO2-227ENST00000575560 ARHGEF28Q8N1W1 1705 aaKnown RBP14.61□□□□□ -0.07
CALCOCO2-227ENST00000575560 RREB1Q92766 1687 aa14.59□□□□□ -0.07
CALCOCO2-227ENST00000575560 GCP02774 474 aa14.59□□□□□ -0.07
CALCOCO2-227ENST00000575560 LMO7Q8WWI1 1683 aa14.58□□□□□ -0.07
CALCOCO2-227ENST00000575560 C11orf95C9JLR9 678 aaPredicted RBP14.58□□□□□ -0.08
CALCOCO2-227ENST00000575560 NLRP13Q86W25 1043 aa14.58□□□□□ -0.08
CALCOCO2-227ENST00000575560 NRKQ7Z2Y5 1582 aa14.58□□□□□ -0.08
CALCOCO2-227ENST00000575560 KCNQ2O43526 872 aa14.57□□□□□ -0.08
CALCOCO2-227ENST00000575560 YY1P25490 414 aa14.57□□□□□ -0.08
CALCOCO2-227ENST00000575560 SPON1Q9HCB6 807 aa14.57□□□□□ -0.08
CALCOCO2-227ENST00000575560 NUP188Q5SRE5 1749 aa14.57□□□□□ -0.08
CALCOCO2-227ENST00000575560 TOPAZ1Q8N9V7 1692 aa14.56□□□□□ -0.08
CALCOCO2-227ENST00000575560 COL5A2P05997 1499 aaPredicted RBP14.56□□□□□ -0.08
CALCOCO2-227ENST00000575560 PLSCR1O15162 318 aa14.55□□□□□ -0.08
CALCOCO2-227ENST00000575560 NBPF1Q3BBV0 1214 aa14.55□□□□□ -0.08
CALCOCO2-227ENST00000575560 BRD4O60885 1362 aaPredicted RBP14.54□□□□□ -0.08
CALCOCO2-227ENST00000575560 CRB1P82279 1406 aa14.54□□□□□ -0.08
CALCOCO2-227ENST00000575560 PARP4Q9UKK3 1724 aaKnown RBP14.53□□□□□ -0.08
CALCOCO2-227ENST00000575560 AATKQ6ZMQ8 1374 aa14.53□□□□□ -0.08
CALCOCO2-227ENST00000575560 PPP1R1BQ9UD71 204 aaPredicted RBP14.53□□□□□ -0.08
CALCOCO2-227ENST00000575560 OVOS2A0A0G2JMS6 1433 aa14.52□□□□□ -0.08
CALCOCO2-227ENST00000575560 OVOS2A0A0J9YW53 1432 aa14.52□□□□□ -0.08
CALCOCO2-227ENST00000575560 OVOS2Q6IE36 1432 aa14.52□□□□□ -0.08
CALCOCO2-227ENST00000575560 PPIP5K1Q6PFW1 1433 aa14.52□□□□□ -0.08
CALCOCO2-227ENST00000575560 NINLQ9Y2I6 1382 aa14.52□□□□□ -0.08
CALCOCO2-227ENST00000575560 SRPK2P78362 688 aaKnown RBP14.52□□□□□ -0.09
CALCOCO2-227ENST00000575560 BCL11BQ9C0K0 894 aaPredicted RBP14.52□□□□□ -0.09
CALCOCO2-227ENST00000575560 CABP2Q9NPB3 220 aa14.52□□□□□ -0.09
CALCOCO2-227ENST00000575560 NLRP6P59044 892 aa14.51□□□□□ -0.09
CALCOCO2-227ENST00000575560 DDB1Q16531 1140 aa14.51□□□□□ -0.09
CALCOCO2-227ENST00000575560 PTF1AQ7RTS3 328 aa14.51□□□□□ -0.09
CALCOCO2-227ENST00000575560 PROM2Q8N271 834 aa14.51□□□□□ -0.09
CALCOCO2-227ENST00000575560 PEAK1Q9H792 1746 aa14.51□□□□□ -0.09
CALCOCO2-227ENST00000575560 UTRNP46939 3433 aa14.51□□□□□ -0.09
CALCOCO2-227ENST00000575560 ANO8Q9HCE9 1232 aaPredicted RBP14.5□□□□□ -0.09
CALCOCO2-227ENST00000575560 CABP1Q9NZU7 370 aa14.5□□□□□ -0.09
CALCOCO2-227ENST00000575560 AXIN2Q9Y2T1 843 aa14.5□□□□□ -0.09
CALCOCO2-227ENST00000575560 KIAA1210Q9ULL0 1709 aa14.49□□□□□ -0.09
CALCOCO2-227ENST00000575560 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
CALCOCO2-227ENST00000575560 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
CALCOCO2-227ENST00000575560 BCL9O00512 1426 aa14.49□□□□□ -0.09
CALCOCO2-227ENST00000575560 USP6P35125 1406 aa14.49□□□□□ -0.09
CALCOCO2-227ENST00000575560 TOM1L2Q6ZVM7 507 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms