RNA–Protein interactions for RNA: ENST00000574526.1

LINC01978-202, Transcript of long intergenic non-protein coding RNA 1978, humanhuman

TSL 1 (best) BASIC

Gene LINC01978, Length 1,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01978-202ENST00000574526 TTC21BQ7Z4L5 1316 aa21.34■■□□□ 1.01
LINC01978-202ENST00000574526 NGDNQ8NEJ9 315 aaKnown RBP21.32■■□□□ 1
LINC01978-202ENST00000574526 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
LINC01978-202ENST00000574526 TTC21AQ8NDW8 1320 aa21.31■■□□□ 1
LINC01978-202ENST00000574526 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
LINC01978-202ENST00000574526 NME9Q86XW9 330 aa21.3■■□□□ 1
LINC01978-202ENST00000574526 PHF8Q9UPP1 1060 aa21.3■■□□□ 1
LINC01978-202ENST00000574526 LRRC7Q96NW7 1537 aa21.3■■□□□ 1
LINC01978-202ENST00000574526 TNNT2P45379 298 aaPredicted RBP21.29■■□□□ 1
LINC01978-202ENST00000574526 ZNF335Q9H4Z2 1342 aaPredicted RBP21.28■■□□□ 1
LINC01978-202ENST00000574526 MTHFSP49914 203 aa21.28■■□□□ 1
LINC01978-202ENST00000574526 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
LINC01978-202ENST00000574526 KIF1AQ12756 1690 aa21.28■■□□□ 1
LINC01978-202ENST00000574526 OVOS2A0A0J9YW53 1432 aa21.27■■□□□ 1
LINC01978-202ENST00000574526 OVOS2Q6IE36 1432 aa21.27■■□□□ 1
LINC01978-202ENST00000574526 MST1RQ04912 1400 aa21.27■■□□□ 1
LINC01978-202ENST00000574526 SHPRHQ149N8 1683 aa21.26■□□□□ 0.99
LINC01978-202ENST00000574526 USP54Q70EL1 1684 aa21.26■□□□□ 0.99
LINC01978-202ENST00000574526 COG3Q96JB2 828 aa21.26■□□□□ 0.99
LINC01978-202ENST00000574526 AATKQ6ZMQ8 1374 aa21.26■□□□□ 0.99
LINC01978-202ENST00000574526 ESCO1Q5FWF5 840 aa21.25■□□□□ 0.99
LINC01978-202ENST00000574526 BLMP54132 1417 aaPredicted RBP21.25■□□□□ 0.99
LINC01978-202ENST00000574526 MSH6P52701 1360 aa21.25■□□□□ 0.99
LINC01978-202ENST00000574526 USP31Q70CQ4 1352 aa21.25■□□□□ 0.99
LINC01978-202ENST00000574526 PIK3C2AO00443 1686 aa21.25■□□□□ 0.99
LINC01978-202ENST00000574526 ATF3P18847 181 aa21.24■□□□□ 0.99
LINC01978-202ENST00000574526 MAP2P11137 1827 aaKnown RBP21.24■□□□□ 0.99
LINC01978-202ENST00000574526 WDR43Q15061 677 aaKnown RBP eCLIP21.24■□□□□ 0.99
LINC01978-202ENST00000574526 CADPS2Q86UW7 1296 aa21.24■□□□□ 0.99
LINC01978-202ENST00000574526 CFAP53Q96M91 514 aa21.24■□□□□ 0.99
LINC01978-202ENST00000574526 ZRANB1Q9UGI0 708 aa21.24■□□□□ 0.99
LINC01978-202ENST00000574526 ZBED9Q6R2W3 1325 aa21.23■□□□□ 0.99
LINC01978-202ENST00000574526 SMG6Q86US8 1419 aaKnown RBP21.23■□□□□ 0.99
LINC01978-202ENST00000574526 ADAMTS8Q9UP79 889 aa21.22■□□□□ 0.99
LINC01978-202ENST00000574526 PNPLA6Q8IY17 1366 aa21.22■□□□□ 0.99
LINC01978-202ENST00000574526 COL3A1P02461 1466 aaPredicted RBP21.22■□□□□ 0.99
LINC01978-202ENST00000574526 ORAI2Q96SN7 254 aa21.21■□□□□ 0.99
LINC01978-202ENST00000574526 MARF1Q9Y4F3 1742 aaKnown RBP21.2■□□□□ 0.98
LINC01978-202ENST00000574526 POLKQ9UBT6 870 aa21.19■□□□□ 0.98
LINC01978-202ENST00000574526 TRPM3Q9HCF6 1732 aaPredicted RBP21.17■□□□□ 0.98
LINC01978-202ENST00000574526 PSME1Q06323 249 aa21.17■□□□□ 0.98
LINC01978-202ENST00000574526 CDK12Q9NYV4 1490 aaPredicted RBP21.17■□□□□ 0.98
LINC01978-202ENST00000574526 FBLN1P23142 703 aa21.14■□□□□ 0.98
LINC01978-202ENST00000574526 FOXO3O43524 673 aa21.14■□□□□ 0.97
LINC01978-202ENST00000574526 ABTB2Q8N961 1025 aa21.13■□□□□ 0.97
LINC01978-202ENST00000574526 EMILIN1Q9Y6C2 1016 aa21.13■□□□□ 0.97
LINC01978-202ENST00000574526 NLRP6P59044 892 aa21.12■□□□□ 0.97
LINC01978-202ENST00000574526 PAK3O75914 559 aaPredicted RBP21.11■□□□□ 0.97
LINC01978-202ENST00000574526 NUDCQ9Y266 331 aa21.11■□□□□ 0.97
LINC01978-202ENST00000574526 LTBP4Q8N2S1 1624 aa21.11■□□□□ 0.97
LINC01978-202ENST00000574526 DIAPH1O60610 1272 aaKnown RBP21.1■□□□□ 0.97
LINC01978-202ENST00000574526 KRT28Q7Z3Y7 464 aa21.1■□□□□ 0.97
LINC01978-202ENST00000574526 RRS1Q15050 365 aaKnown RBP21.09■□□□□ 0.97
LINC01978-202ENST00000574526 PEAK1Q9H792 1746 aa21.09■□□□□ 0.97
LINC01978-202ENST00000574526 ALS2Q96Q42 1657 aa21.09■□□□□ 0.97
LINC01978-202ENST00000574526 NPHP3Q7Z494 1330 aa21.08■□□□□ 0.96
LINC01978-202ENST00000574526 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
LINC01978-202ENST00000574526 SBNO1A3KN83 1393 aa21.06■□□□□ 0.96
LINC01978-202ENST00000574526 KIF24Q5T7B8 1368 aa21.06■□□□□ 0.96
LINC01978-202ENST00000574526 SLIT3O75094 1523 aa21.06■□□□□ 0.96
LINC01978-202ENST00000574526 SLAIN2Q9P270 581 aa21.06■□□□□ 0.96
LINC01978-202ENST00000574526 PXDNQ92626 1479 aa21.05■□□□□ 0.96
LINC01978-202ENST00000574526 BRINP3Q76B58 766 aa21.05■□□□□ 0.96
LINC01978-202ENST00000574526 NFAT5O94916 1531 aa21.05■□□□□ 0.96
LINC01978-202ENST00000574526 U2AF1L5P0DN76 240 aaPredicted RBP21.04■□□□□ 0.96
LINC01978-202ENST00000574526 IL13P35225 146 aa21.04■□□□□ 0.96
LINC01978-202ENST00000574526 U2AF1Q01081 240 aaKnown RBP eCLIP21.04■□□□□ 0.96
LINC01978-202ENST00000574526 XPCQ01831 940 aaPredicted RBP21.04■□□□□ 0.96
LINC01978-202ENST00000574526 NUTM2GQ5VZR2 741 aa21.04■□□□□ 0.96
LINC01978-202ENST00000574526 CCDC146Q8IYE0 955 aa21.04■□□□□ 0.96
LINC01978-202ENST00000574526 NGEFQ8N5V2 710 aa21.04■□□□□ 0.96
LINC01978-202ENST00000574526 RUNDC1Q96C34 613 aa21.04■□□□□ 0.96
LINC01978-202ENST00000574526 MAP3K19Q56UN5 1328 aa21.04■□□□□ 0.96
LINC01978-202ENST00000574526 IQSEC2Q5JU85 1478 aa21.03■□□□□ 0.96
LINC01978-202ENST00000574526 FLT4P35916 1363 aa21.03■□□□□ 0.96
LINC01978-202ENST00000574526 USP19O94966 1318 aa21.02■□□□□ 0.96
LINC01978-202ENST00000574526 U2SURPO15042 1029 aaKnown RBP21.02■□□□□ 0.96
LINC01978-202ENST00000574526 PDE3BQ13370 1112 aa21.02■□□□□ 0.96
LINC01978-202ENST00000574526 KCNH5Q8NCM2 988 aa21.02■□□□□ 0.96
LINC01978-202ENST00000574526 PHRF1Q9P1Y6 1649 aaKnown RBP21.02■□□□□ 0.96
LINC01978-202ENST00000574526 LTN1O94822 1766 aa21.01■□□□□ 0.95
LINC01978-202ENST00000574526 SENP3-EIF4A1A0A087X0R7 540 aa21■□□□□ 0.95
LINC01978-202ENST00000574526 APAF1O14727 1248 aa21■□□□□ 0.95
LINC01978-202ENST00000574526 NCBP3Q53F19 620 aaKnown RBP21■□□□□ 0.95
LINC01978-202ENST00000574526 NHSL1Q5SYE7 1610 aa21■□□□□ 0.95
LINC01978-202ENST00000574526 TNS3Q68CZ2 1445 aa21■□□□□ 0.95
LINC01978-202ENST00000574526 RTL1A6NKG5 1358 aa20.99■□□□□ 0.95
LINC01978-202ENST00000574526 SOX12O15370 315 aa20.99■□□□□ 0.95
LINC01978-202ENST00000574526 DDX17Q92841 729 aaKnown RBP20.99■□□□□ 0.95
LINC01978-202ENST00000574526 PLEKHF1Q96S99 279 aa20.99■□□□□ 0.95
LINC01978-202ENST00000574526 PNNQ9H307 717 aaKnown RBP20.99■□□□□ 0.95
LINC01978-202ENST00000574526 RGPD1P0DJD0 1748 aa20.99■□□□□ 0.95
LINC01978-202ENST00000574526 FCHSD2O94868 740 aa20.99■□□□□ 0.95
LINC01978-202ENST00000574526 ZNF521Q96K83 1311 aa20.98■□□□□ 0.95
LINC01978-202ENST00000574526 EIF4A2Q14240 407 aaKnown RBP20.98■□□□□ 0.95
LINC01978-202ENST00000574526 SALL2Q9Y467 1007 aaPredicted RBP20.98■□□□□ 0.95
LINC01978-202ENST00000574526 SOS2Q07890 1332 aaPredicted RBP20.97■□□□□ 0.95
LINC01978-202ENST00000574526 AMPHP49418 695 aa20.97■□□□□ 0.95
LINC01978-202ENST00000574526 HSP90AB2PQ58FF8 381 aa20.97■□□□□ 0.95
LINC01978-202ENST00000574526 MED1Q15648 1581 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms