RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 BCL9LQ86UU0 1499 aa20.71■□□□□ 0.91
LITAF-208ENST00000571627 PLEKHG3A1L390 1219 aa20.71■□□□□ 0.91
LITAF-208ENST00000571627 EVC2Q86UK5 1308 aa20.71■□□□□ 0.91
LITAF-208ENST00000571627 ATRNO75882 1429 aa20.7■□□□□ 0.9
LITAF-208ENST00000571627 CDK12Q9NYV4 1490 aaPredicted RBP20.69■□□□□ 0.9
LITAF-208ENST00000571627 SLIT2O94813 1529 aa20.69■□□□□ 0.9
LITAF-208ENST00000571627 PHRF1Q9P1Y6 1649 aaKnown RBP20.69■□□□□ 0.9
LITAF-208ENST00000571627 RGS12O14924 1447 aa20.69■□□□□ 0.9
LITAF-208ENST00000571627 RBM6P78332 1123 aaKnown RBP20.68■□□□□ 0.9
LITAF-208ENST00000571627 CLSPNQ9HAW4 1339 aa20.68■□□□□ 0.9
LITAF-208ENST00000571627 NWD2Q9ULI1 1742 aa20.67■□□□□ 0.9
LITAF-208ENST00000571627 TRPC5Q9UL62 973 aaPredicted RBP20.67■□□□□ 0.9
LITAF-208ENST00000571627 NUTM2GQ5VZR2 741 aa20.66■□□□□ 0.9
LITAF-208ENST00000571627 CABP1Q9NZU7 370 aa20.66■□□□□ 0.9
LITAF-208ENST00000571627 SBNO2Q9Y2G9 1366 aa20.65■□□□□ 0.9
LITAF-208ENST00000571627 AKAP12Q02952 1782 aa20.64■□□□□ 0.9
LITAF-208ENST00000571627 COL14A1Q05707 1796 aaKnown RBP20.64■□□□□ 0.89
LITAF-208ENST00000571627 NRAPQ86VF7 1730 aa20.64■□□□□ 0.89
LITAF-208ENST00000571627 UNC5CLQ8IV45 518 aa20.63■□□□□ 0.89
LITAF-208ENST00000571627 USP6P35125 1406 aa20.62■□□□□ 0.89
LITAF-208ENST00000571627 FAM83GA6ND36 823 aa20.62■□□□□ 0.89
LITAF-208ENST00000571627 GLI3P10071 1580 aa20.62■□□□□ 0.89
LITAF-208ENST00000571627 NRKQ7Z2Y5 1582 aa20.61■□□□□ 0.89
LITAF-208ENST00000571627 ABTB2Q8N961 1025 aa20.6■□□□□ 0.89
LITAF-208ENST00000571627 ATAD2Q6PL18 1390 aa20.59■□□□□ 0.89
LITAF-208ENST00000571627 PIK3C2AO00443 1686 aa20.59■□□□□ 0.89
LITAF-208ENST00000571627 GJD4Q96KN9 370 aaPredicted RBP20.59■□□□□ 0.89
LITAF-208ENST00000571627 CCER1Q8TC90 406 aaPredicted RBP20.58■□□□□ 0.89
LITAF-208ENST00000571627 TIMELESSQ9UNS1 1208 aa20.58■□□□□ 0.89
LITAF-208ENST00000571627 MON2Q7Z3U7 1717 aa20.58■□□□□ 0.88
LITAF-208ENST00000571627 ST20-MTHFSA0A0A6YYL1 179 aa20.57■□□□□ 0.88
LITAF-208ENST00000571627 PRDM11Q9NQV5 511 aa20.57■□□□□ 0.88
LITAF-208ENST00000571627 KIAA0232Q92628 1395 aa20.57■□□□□ 0.88
LITAF-208ENST00000571627 SSH2Q76I76 1423 aa20.56■□□□□ 0.88
LITAF-208ENST00000571627 BTG4Q9NY30 223 aa20.56■□□□□ 0.88
LITAF-208ENST00000571627 USP19O94966 1318 aa20.55■□□□□ 0.88
LITAF-208ENST00000571627 ZC3H6P61129 1189 aaKnown RBP20.55■□□□□ 0.88
LITAF-208ENST00000571627 CHRNA2Q15822 529 aa20.55■□□□□ 0.88
LITAF-208ENST00000571627 TESK2Q96S53 571 aa20.55■□□□□ 0.88
LITAF-208ENST00000571627 BRD4O60885 1362 aaPredicted RBP20.55■□□□□ 0.88
LITAF-208ENST00000571627 USP47Q96K76 1375 aa20.55■□□□□ 0.88
LITAF-208ENST00000571627 CPSF1Q10570 1443 aaKnown RBP20.54■□□□□ 0.88
LITAF-208ENST00000571627 VPS72Q15906 364 aa20.54■□□□□ 0.88
LITAF-208ENST00000571627 CCDC9Q9Y3X0 531 aaKnown RBP20.54■□□□□ 0.88
LITAF-208ENST00000571627 BRWD3Q6RI45 1802 aa20.54■□□□□ 0.88
LITAF-208ENST00000571627 CD163L1Q9NR16 1453 aa20.52■□□□□ 0.88
LITAF-208ENST00000571627 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
LITAF-208ENST00000571627 NLRP13Q86W25 1043 aa20.52■□□□□ 0.88
LITAF-208ENST00000571627 UPF1Q92900 1129 aaKnown RBP eCLIP20.52■□□□□ 0.88
LITAF-208ENST00000571627 NLRP6P59044 892 aa20.51■□□□□ 0.87
LITAF-208ENST00000571627 TMC1Q8TDI8 760 aa20.51■□□□□ 0.87
LITAF-208ENST00000571627 SLIT3O75094 1523 aa20.51■□□□□ 0.87
LITAF-208ENST00000571627 TTC21BQ7Z4L5 1316 aa20.51■□□□□ 0.87
LITAF-208ENST00000571627 ZNF692Q9BU19 519 aaPredicted RBP20.5■□□□□ 0.87
LITAF-208ENST00000571627 LMO7Q8WWI1 1683 aa20.5■□□□□ 0.87
LITAF-208ENST00000571627 EP400Q96L91 3159 aa20.5■□□□□ 0.87
LITAF-208ENST00000571627 SLC12A5Q9H2X9 1139 aa20.49■□□□□ 0.87
LITAF-208ENST00000571627 GCP02774 474 aa20.48■□□□□ 0.87
LITAF-208ENST00000571627 CAMTA1Q9Y6Y1 1673 aa20.48■□□□□ 0.87
LITAF-208ENST00000571627 CPDO75976 1380 aa20.47■□□□□ 0.87
LITAF-208ENST00000571627 STRN4Q9NRL3 753 aa20.46■□□□□ 0.87
LITAF-208ENST00000571627 TTC21AQ8NDW8 1320 aa20.46■□□□□ 0.87
LITAF-208ENST00000571627 A0A1W2PP64 1363 aa20.46■□□□□ 0.87
LITAF-208ENST00000571627 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
LITAF-208ENST00000571627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.45■□□□□ 0.86
LITAF-208ENST00000571627 SEPT12Q8IYM1 358 aa20.45■□□□□ 0.86
LITAF-208ENST00000571627 HDGFL2Q7Z4V5 671 aaPredicted RBP20.44■□□□□ 0.86
LITAF-208ENST00000571627 PUS7Q96PZ0 661 aaKnown RBP20.44■□□□□ 0.86
LITAF-208ENST00000571627 ZRANB1Q9UGI0 708 aa20.44■□□□□ 0.86
LITAF-208ENST00000571627 SPATA31A5Q5VU36 1347 aa20.44■□□□□ 0.86
LITAF-208ENST00000571627 SPATA31A7Q8IWB4 1347 aa20.44■□□□□ 0.86
LITAF-208ENST00000571627 USP54Q70EL1 1684 aa20.43■□□□□ 0.86
LITAF-208ENST00000571627 A0A0G2JS52 829 aa20.43■□□□□ 0.86
LITAF-208ENST00000571627 SOX12O15370 315 aa20.43■□□□□ 0.86
LITAF-208ENST00000571627 MYT1Q01538 1121 aa20.43■□□□□ 0.86
LITAF-208ENST00000571627 FAM98CQ17RN3 349 aaKnown RBP20.43■□□□□ 0.86
LITAF-208ENST00000571627 COL18A1P39060 1754 aa20.42■□□□□ 0.86
LITAF-208ENST00000571627 RGPD5Q99666 1765 aa20.42■□□□□ 0.86
LITAF-208ENST00000571627 EDC4Q6P2E9 1401 aaKnown RBP20.42■□□□□ 0.86
LITAF-208ENST00000571627 THSD7AQ9UPZ6 1657 aa20.42■□□□□ 0.86
LITAF-208ENST00000571627 ONECUT3O60422 494 aaPredicted RBP20.41■□□□□ 0.86
LITAF-208ENST00000571627 TMF1P82094 1093 aa20.41■□□□□ 0.86
LITAF-208ENST00000571627 NME9Q86XW9 330 aa20.41■□□□□ 0.86
LITAF-208ENST00000571627 TERF2IPQ9NYB0 399 aa20.41■□□□□ 0.86
LITAF-208ENST00000571627 NFAT5O94916 1531 aa20.41■□□□□ 0.86
LITAF-208ENST00000571627 SLC24A1O60721 1099 aa20.4■□□□□ 0.86
LITAF-208ENST00000571627 COL5A2P05997 1499 aaPredicted RBP20.4■□□□□ 0.86
LITAF-208ENST00000571627 SPATA31A1Q5TZJ5 1347 aa20.4■□□□□ 0.86
LITAF-208ENST00000571627 NINLQ9Y2I6 1382 aa20.4■□□□□ 0.86
LITAF-208ENST00000571627 EVA1CP58658 441 aa20.39■□□□□ 0.85
LITAF-208ENST00000571627 LARP1Q6PKG0 1096 aaKnown RBP20.39■□□□□ 0.85
LITAF-208ENST00000571627 MYOM1P52179 1685 aa20.38■□□□□ 0.85
LITAF-208ENST00000571627 USP35Q9P2H5 1018 aa20.38■□□□□ 0.85
LITAF-208ENST00000571627 LTN1O94822 1766 aa20.38■□□□□ 0.85
LITAF-208ENST00000571627 AATKQ6ZMQ8 1374 aa20.37■□□□□ 0.85
LITAF-208ENST00000571627 USP31Q70CQ4 1352 aa20.37■□□□□ 0.85
LITAF-208ENST00000571627 KRT27Q7Z3Y8 459 aa20.36■□□□□ 0.85
LITAF-208ENST00000571627 KCNH5Q8NCM2 988 aa20.36■□□□□ 0.85
LITAF-208ENST00000571627 ARHGEF25Q86VW2 580 aa20.35■□□□□ 0.85
LITAF-208ENST00000571627 ANKRD36BQ8N2N9 1353 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms