RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 RCAN3Q9UKA8 241 aa18.23■□□□□ 0.51
GCOM1-213ENST00000569945 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
GCOM1-213ENST00000569945 XIRP1Q702N8 1843 aaKnown RBP18.23■□□□□ 0.51
GCOM1-213ENST00000569945 LTBP4Q8N2S1 1624 aa18.22■□□□□ 0.51
GCOM1-213ENST00000569945 CLCN1P35523 988 aa18.22■□□□□ 0.51
GCOM1-213ENST00000569945 WASLO00401 505 aaPredicted RBP18.21■□□□□ 0.51
GCOM1-213ENST00000569945 NAP1L5Q96NT1 182 aaPredicted RBP18.21■□□□□ 0.51
GCOM1-213ENST00000569945 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
GCOM1-213ENST00000569945 SRPK2P78362 688 aaKnown RBP18.2■□□□□ 0.5
GCOM1-213ENST00000569945 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
GCOM1-213ENST00000569945 PNNQ9H307 717 aaKnown RBP18.2■□□□□ 0.5
GCOM1-213ENST00000569945 ADGRL3Q9HAR2 1447 aa18.19■□□□□ 0.5
GCOM1-213ENST00000569945 L1TD1Q5T7N2 865 aaKnown RBP18.19■□□□□ 0.5
GCOM1-213ENST00000569945 PRR36Q9H6K5 1346 aa18.18■□□□□ 0.5
GCOM1-213ENST00000569945 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
GCOM1-213ENST00000569945 C8orf34Q49A92 452 aa18.16■□□□□ 0.5
GCOM1-213ENST00000569945 C19orf44Q9H6X5 657 aa18.16■□□□□ 0.5
GCOM1-213ENST00000569945 NUDT16Q96DE0 195 aaKnown RBP18.15■□□□□ 0.5
GCOM1-213ENST00000569945 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
GCOM1-213ENST00000569945 SLC12A5Q9H2X9 1139 aa18.14■□□□□ 0.49
GCOM1-213ENST00000569945 FAM161AQ3B820 660 aa18.14■□□□□ 0.49
GCOM1-213ENST00000569945 TMC1Q8TDI8 760 aa18.14■□□□□ 0.49
GCOM1-213ENST00000569945 RGPD8O14715 1765 aaPredicted RBP18.13■□□□□ 0.49
GCOM1-213ENST00000569945 USP32Q8NFA0 1604 aa18.13■□□□□ 0.49
GCOM1-213ENST00000569945 CDC42BPGQ6DT37 1551 aa18.12■□□□□ 0.49
GCOM1-213ENST00000569945 ATP7BP35670 1465 aa18.12■□□□□ 0.49
GCOM1-213ENST00000569945 FMN2Q9NZ56 1722 aa18.11■□□□□ 0.49
GCOM1-213ENST00000569945 CABP1Q9NZU7 370 aa18.11■□□□□ 0.49
GCOM1-213ENST00000569945 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
GCOM1-213ENST00000569945 MYOM1P52179 1685 aa18.11■□□□□ 0.49
GCOM1-213ENST00000569945 MSH6P52701 1360 aa18.11■□□□□ 0.49
GCOM1-213ENST00000569945 SLC24A1O60721 1099 aa18.1■□□□□ 0.49
GCOM1-213ENST00000569945 CDCA8Q53HL2 280 aa18.1■□□□□ 0.49
GCOM1-213ENST00000569945 KTN1Q86UP2 1357 aaKnown RBP18.1■□□□□ 0.49
GCOM1-213ENST00000569945 ATF3P18847 181 aa18.1■□□□□ 0.49
GCOM1-213ENST00000569945 PDE3BQ13370 1112 aa18.1■□□□□ 0.49
GCOM1-213ENST00000569945 XRCC6P12956 609 aaKnown RBP eCLIP18.09■□□□□ 0.49
GCOM1-213ENST00000569945 PMFBP1Q8TBY8 1022 aa18.09■□□□□ 0.49
GCOM1-213ENST00000569945 ORAI2Q96SN7 254 aa18.09■□□□□ 0.49
GCOM1-213ENST00000569945 CRBNQ96SW2 442 aa18.09■□□□□ 0.49
GCOM1-213ENST00000569945 FSD2A1L4K1 749 aa18.08■□□□□ 0.48
GCOM1-213ENST00000569945 MST1RQ04912 1400 aa18.08■□□□□ 0.48
GCOM1-213ENST00000569945 PPIP5K1Q6PFW1 1433 aa18.08■□□□□ 0.48
GCOM1-213ENST00000569945 PANK3Q9H999 370 aa18.07■□□□□ 0.48
GCOM1-213ENST00000569945 CCDC61Q9Y6R9 512 aa18.07■□□□□ 0.48
GCOM1-213ENST00000569945 PUS7Q96PZ0 661 aaKnown RBP18.07■□□□□ 0.48
GCOM1-213ENST00000569945 BRD4O60885 1362 aaPredicted RBP18.07■□□□□ 0.48
GCOM1-213ENST00000569945 ATAD2Q6PL18 1390 aa18.07■□□□□ 0.48
GCOM1-213ENST00000569945 C1orf167Q5SNV9 1468 aa18.06■□□□□ 0.48
GCOM1-213ENST00000569945 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
GCOM1-213ENST00000569945 CADPS2Q86UW7 1296 aa18.06■□□□□ 0.48
GCOM1-213ENST00000569945 CD163L1Q9NR16 1453 aa18.05■□□□□ 0.48
GCOM1-213ENST00000569945 PLIN1O60240 522 aa18.05■□□□□ 0.48
GCOM1-213ENST00000569945 PRDM4Q9UKN5 801 aa18.05■□□□□ 0.48
GCOM1-213ENST00000569945 CNGB1Q14028 1251 aaPredicted RBP18.04■□□□□ 0.48
GCOM1-213ENST00000569945 CARD14Q9BXL6 1004 aa18.04■□□□□ 0.48
GCOM1-213ENST00000569945 DCCP43146 1447 aa18.04■□□□□ 0.48
GCOM1-213ENST00000569945 TOPAZ1Q8N9V7 1692 aa18.04■□□□□ 0.48
GCOM1-213ENST00000569945 ANKARQ7Z5J8 1434 aa18.04■□□□□ 0.48
GCOM1-213ENST00000569945 DDX17Q92841 729 aaKnown RBP18.04■□□□□ 0.48
GCOM1-213ENST00000569945 CALD1Q05682 793 aaKnown RBP18.03■□□□□ 0.48
GCOM1-213ENST00000569945 CENPQQ7L2Z9 268 aaPredicted RBP18.03■□□□□ 0.48
GCOM1-213ENST00000569945 SLAIN2Q9P270 581 aa18.03■□□□□ 0.48
GCOM1-213ENST00000569945 VIRMAQ69YN4 1812 aaKnown RBP18.03■□□□□ 0.48
GCOM1-213ENST00000569945 A0A1W2PP64 1363 aa18.02■□□□□ 0.48
GCOM1-213ENST00000569945 ACEP12821 1306 aa18.02■□□□□ 0.48
GCOM1-213ENST00000569945 RBM10P98175 930 aaKnown RBP18.02■□□□□ 0.48
GCOM1-213ENST00000569945 CERKQ8TCT0 537 aa18.02■□□□□ 0.48
GCOM1-213ENST00000569945 PDCL3Q9H2J4 239 aa18.02■□□□□ 0.48
GCOM1-213ENST00000569945 PHF8Q9UPP1 1060 aa18.01■□□□□ 0.47
GCOM1-213ENST00000569945 USP19O94966 1318 aa18.01■□□□□ 0.47
GCOM1-213ENST00000569945 PLEKHG3A1L390 1219 aa18.01■□□□□ 0.47
GCOM1-213ENST00000569945 XPCQ01831 940 aaPredicted RBP18■□□□□ 0.47
GCOM1-213ENST00000569945 PANK2Q9BZ23 570 aa18■□□□□ 0.47
GCOM1-213ENST00000569945 PER1O15534 1290 aaPredicted RBP17.99■□□□□ 0.47
GCOM1-213ENST00000569945 FOXO3O43524 673 aa17.99■□□□□ 0.47
GCOM1-213ENST00000569945 BRINP3Q76B58 766 aa17.99■□□□□ 0.47
GCOM1-213ENST00000569945 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
GCOM1-213ENST00000569945 MYBBP1AQ9BQG0 1328 aaKnown RBP17.99■□□□□ 0.47
GCOM1-213ENST00000569945 GOLGA6L3A6NEY3 463 aa17.99■□□□□ 0.47
GCOM1-213ENST00000569945 AAMPQ13685 434 aa17.99■□□□□ 0.47
GCOM1-213ENST00000569945 NGDNQ8NEJ9 315 aaKnown RBP17.99■□□□□ 0.47
GCOM1-213ENST00000569945 ANKRD36BQ8N2N9 1353 aa17.99■□□□□ 0.47
GCOM1-213ENST00000569945 ANTXR1Q9H6X2 564 aa17.98■□□□□ 0.47
GCOM1-213ENST00000569945 CPSF1Q10570 1443 aaKnown RBP17.98■□□□□ 0.47
GCOM1-213ENST00000569945 ITSN1Q15811 1721 aa17.98■□□□□ 0.47
GCOM1-213ENST00000569945 TPM2P07951 284 aa17.97■□□□□ 0.47
GCOM1-213ENST00000569945 NSD3Q9BZ95 1437 aa17.96■□□□□ 0.47
GCOM1-213ENST00000569945 NINLQ9Y2I6 1382 aa17.96■□□□□ 0.47
GCOM1-213ENST00000569945 PIP4K2BP78356 416 aa17.96■□□□□ 0.47
GCOM1-213ENST00000569945 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
GCOM1-213ENST00000569945 POLR3AO14802 1390 aaPredicted RBP17.96■□□□□ 0.46
GCOM1-213ENST00000569945 UBAP1LF5GYI3 381 aa17.95■□□□□ 0.46
GCOM1-213ENST00000569945 C20orf194Q5TEA3 1177 aa17.95■□□□□ 0.46
GCOM1-213ENST00000569945 HDGFL2Q7Z4V5 671 aaPredicted RBP17.95■□□□□ 0.46
GCOM1-213ENST00000569945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.95■□□□□ 0.46
GCOM1-213ENST00000569945 AKAP12Q02952 1782 aa17.94■□□□□ 0.46
GCOM1-213ENST00000569945 ERBB4Q15303 1308 aa17.94■□□□□ 0.46
GCOM1-213ENST00000569945 ZRANB1Q9UGI0 708 aa17.94■□□□□ 0.46
GCOM1-213ENST00000569945 ESPNB1AK53 854 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms