RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 PLCG2P16885 1265 aa14.02□□□□□ -0.16
GDE1-205ENST00000569899 CADPS2Q86UW7 1296 aa14.02□□□□□ -0.16
GDE1-205ENST00000569899 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.16
GDE1-205ENST00000569899 METRNQ9UJH8 293 aa14.01□□□□□ -0.17
GDE1-205ENST00000569899 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
GDE1-205ENST00000569899 POTEFA5A3E0 1075 aa14□□□□□ -0.17
GDE1-205ENST00000569899 SEC24BO95487 1268 aa14□□□□□ -0.17
GDE1-205ENST00000569899 DIEXFQ68CQ4 756 aaKnown RBP14□□□□□ -0.17
GDE1-205ENST00000569899 KNDC1Q76NI1 1749 aa13.99□□□□□ -0.17
GDE1-205ENST00000569899 CCDC7Q96M83 1385 aa13.99□□□□□ -0.17
GDE1-205ENST00000569899 WASHC2AQ641Q2 1341 aa13.99□□□□□ -0.17
GDE1-205ENST00000569899 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.99□□□□□ -0.17
GDE1-205ENST00000569899 EIF3AQ14152 1382 aaKnown RBP13.98□□□□□ -0.17
GDE1-205ENST00000569899 C11orf95C9JLR9 678 aaPredicted RBP13.98□□□□□ -0.17
GDE1-205ENST00000569899 TMEM132EQ6IEE7 984 aa13.98□□□□□ -0.17
GDE1-205ENST00000569899 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
GDE1-205ENST00000569899 KIF7Q2M1P5 1343 aa13.97□□□□□ -0.17
GDE1-205ENST00000569899 LTKP29376 864 aa13.97□□□□□ -0.17
GDE1-205ENST00000569899 ADAMTS13Q76LX8 1427 aa13.96□□□□□ -0.17
GDE1-205ENST00000569899 KDM4FA0A1W2PPD8 638 aa13.96□□□□□ -0.17
GDE1-205ENST00000569899 THEMISQ8N1K5 641 aaPredicted RBP13.96□□□□□ -0.17
GDE1-205ENST00000569899 YTHDC2Q9H6S0 1430 aaKnown RBP13.96□□□□□ -0.18
GDE1-205ENST00000569899 DIP2AQ14689 1571 aa13.95□□□□□ -0.18
GDE1-205ENST00000569899 TESK2Q96S53 571 aa13.95□□□□□ -0.18
GDE1-205ENST00000569899 DISP3Q9P2K9 1392 aa13.95□□□□□ -0.18
GDE1-205ENST00000569899 HDGFP51858 240 aaKnown RBP13.94□□□□□ -0.18
GDE1-205ENST00000569899 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
GDE1-205ENST00000569899 TXNDC2Q86VQ3 553 aa13.94□□□□□ -0.18
GDE1-205ENST00000569899 MYOM1P52179 1685 aa13.94□□□□□ -0.18
GDE1-205ENST00000569899 TRAK1Q9UPV9 953 aa13.93□□□□□ -0.18
GDE1-205ENST00000569899 MED14O60244 1454 aa13.93□□□□□ -0.18
GDE1-205ENST00000569899 EID1Q9Y6B2 187 aa13.93□□□□□ -0.18
GDE1-205ENST00000569899 CPS1P31327 1500 aa13.93□□□□□ -0.18
GDE1-205ENST00000569899 DLC1Q96QB1 1528 aa13.93□□□□□ -0.18
GDE1-205ENST00000569899 METP08581 1390 aa13.93□□□□□ -0.18
GDE1-205ENST00000569899 MICALL2Q8IY33 904 aa13.92□□□□□ -0.18
GDE1-205ENST00000569899 BOLA1Q9Y3E2 137 aa13.91□□□□□ -0.18
GDE1-205ENST00000569899 CENPJQ9HC77 1338 aaPredicted RBP13.91□□□□□ -0.18
GDE1-205ENST00000569899 XRN1Q8IZH2 1706 aaKnown RBP13.91□□□□□ -0.18
GDE1-205ENST00000569899 LRPPRCP42704 1394 aaKnown RBP13.9□□□□□ -0.18
GDE1-205ENST00000569899 SBNO2Q9Y2G9 1366 aa13.9□□□□□ -0.18
GDE1-205ENST00000569899 BCANQ96GW7 911 aa13.9□□□□□ -0.18
GDE1-205ENST00000569899 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
GDE1-205ENST00000569899 STK26Q9P289 416 aa13.9□□□□□ -0.18
GDE1-205ENST00000569899 TULP4Q9NRJ4 1543 aa13.9□□□□□ -0.18
GDE1-205ENST00000569899 TMEM121BQ9BXQ6 578 aaPredicted RBP13.89□□□□□ -0.19
GDE1-205ENST00000569899 TMF1P82094 1093 aa13.88□□□□□ -0.19
GDE1-205ENST00000569899 TECPR2O15040 1411 aa13.88□□□□□ -0.19
GDE1-205ENST00000569899 LMTK3Q96Q04 1460 aa13.88□□□□□ -0.19
GDE1-205ENST00000569899 CHD2O14647 1828 aaKnown RBP13.87□□□□□ -0.19
GDE1-205ENST00000569899 PTPRUQ92729 1446 aa13.87□□□□□ -0.19
GDE1-205ENST00000569899 L3MBTL3Q96JM7 780 aaPredicted RBP13.87□□□□□ -0.19
GDE1-205ENST00000569899 SLC26A8Q96RN1 970 aa13.86□□□□□ -0.19
GDE1-205ENST00000569899 ABCC11Q96J66 1382 aa13.86□□□□□ -0.19
GDE1-205ENST00000569899 ANKLE2Q86XL3 938 aa13.86□□□□□ -0.19
GDE1-205ENST00000569899 NCKAP5LQ9HCH0 1330 aa13.85□□□□□ -0.19
GDE1-205ENST00000569899 PLEKHH1Q9ULM0 1364 aa13.85□□□□□ -0.19
GDE1-205ENST00000569899 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
GDE1-205ENST00000569899 G3V3G9 751 aa13.85□□□□□ -0.19
GDE1-205ENST00000569899 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
GDE1-205ENST00000569899 PRAM1Q96QH2 718 aa13.84□□□□□ -0.19
GDE1-205ENST00000569899 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
GDE1-205ENST00000569899 STRCQ7RTU9 1775 aa13.83□□□□□ -0.2
GDE1-205ENST00000569899 CRISPLD2Q9H0B8 497 aa13.82□□□□□ -0.2
GDE1-205ENST00000569899 TBX22Q9Y458 520 aa13.82□□□□□ -0.2
GDE1-205ENST00000569899 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
GDE1-205ENST00000569899 FAM135BQ49AJ0 1406 aa13.82□□□□□ -0.2
GDE1-205ENST00000569899 ADGRB2O60241 1585 aa13.82□□□□□ -0.2
GDE1-205ENST00000569899 PTCH1Q13635 1447 aa13.82□□□□□ -0.2
GDE1-205ENST00000569899 NWD1Q149M9 1564 aa13.81□□□□□ -0.2
GDE1-205ENST00000569899 POGKQ9P215 609 aa13.81□□□□□ -0.2
GDE1-205ENST00000569899 MINK1Q8N4C8 1332 aaPredicted RBP13.81□□□□□ -0.2
GDE1-205ENST00000569899 PIK3R4Q99570 1358 aa13.8□□□□□ -0.2
GDE1-205ENST00000569899 PDE4AP27815 886 aa13.8□□□□□ -0.2
GDE1-205ENST00000569899 HSPA2P54652 639 aa13.8□□□□□ -0.2
GDE1-205ENST00000569899 WAPLQ7Z5K2 1190 aa13.8□□□□□ -0.2
GDE1-205ENST00000569899 NALCNQ8IZF0 1738 aa13.8□□□□□ -0.2
GDE1-205ENST00000569899 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
GDE1-205ENST00000569899 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
GDE1-205ENST00000569899 STRCP1A6NGW2 1772 aa13.78□□□□□ -0.2
GDE1-205ENST00000569899 EVC2Q86UK5 1308 aa13.78□□□□□ -0.2
GDE1-205ENST00000569899 WDR70Q9NW82 654 aa13.77□□□□□ -0.21
GDE1-205ENST00000569899 AMOTL2Q9Y2J4 779 aa13.77□□□□□ -0.21
GDE1-205ENST00000569899 TOPAZ1Q8N9V7 1692 aa13.76□□□□□ -0.21
GDE1-205ENST00000569899 SIRT1Q96EB6 747 aa13.75□□□□□ -0.21
GDE1-205ENST00000569899 KCNA6P17658 529 aa13.75□□□□□ -0.21
GDE1-205ENST00000569899 MFSD10Q14728 455 aa13.75□□□□□ -0.21
GDE1-205ENST00000569899 GPHNQ9NQX3 736 aaPredicted RBP13.75□□□□□ -0.21
GDE1-205ENST00000569899 POTEB2H3BUK9 544 aa13.74□□□□□ -0.21
GDE1-205ENST00000569899 ANP32CO43423 234 aa13.74□□□□□ -0.21
GDE1-205ENST00000569899 FMN2Q9NZ56 1722 aa13.74□□□□□ -0.21
GDE1-205ENST00000569899 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
GDE1-205ENST00000569899 USP32Q8NFA0 1604 aa13.73□□□□□ -0.21
GDE1-205ENST00000569899 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
GDE1-205ENST00000569899 TMEM92Q6UXU6 159 aa13.73□□□□□ -0.21
GDE1-205ENST00000569899 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
GDE1-205ENST00000569899 SRPK2P78362 688 aaKnown RBP13.72□□□□□ -0.21
GDE1-205ENST00000569899 PANK3Q9H999 370 aa13.72□□□□□ -0.21
GDE1-205ENST00000569899 ATAD2Q6PL18 1390 aa13.72□□□□□ -0.21
GDE1-205ENST00000569899 ATP7BP35670 1465 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms