RNA–Protein interactions for RNA: ENST00000569889.1

RBFOX1-218, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-218ENST00000569889 TRPM3Q9HCF6 1732 aaPredicted RBP17.86■□□□□ 0.45
RBFOX1-218ENST00000569889 NBPF1Q3BBV0 1214 aa17.85■□□□□ 0.45
RBFOX1-218ENST00000569889 ARHGEF28Q8N1W1 1705 aaKnown RBP17.85■□□□□ 0.45
RBFOX1-218ENST00000569889 STAC3Q96MF2 364 aa17.85■□□□□ 0.45
RBFOX1-218ENST00000569889 NWD2Q9ULI1 1742 aa17.84■□□□□ 0.45
RBFOX1-218ENST00000569889 CHRNA2Q15822 529 aa17.84■□□□□ 0.45
RBFOX1-218ENST00000569889 FAM182BQ5T319 152 aa17.84■□□□□ 0.45
RBFOX1-218ENST00000569889 PRDM11Q9NQV5 511 aa17.84■□□□□ 0.45
RBFOX1-218ENST00000569889 STRN4Q9NRL3 753 aa17.84■□□□□ 0.45
RBFOX1-218ENST00000569889 ZC3H6P61129 1189 aaKnown RBP17.83■□□□□ 0.44
RBFOX1-218ENST00000569889 ALS2Q96Q42 1657 aa17.82■□□□□ 0.44
RBFOX1-218ENST00000569889 SRPK2P78362 688 aaKnown RBP17.81■□□□□ 0.44
RBFOX1-218ENST00000569889 ITSN1Q15811 1721 aa17.81■□□□□ 0.44
RBFOX1-218ENST00000569889 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
RBFOX1-218ENST00000569889 ZBTB7CA1YPR0 619 aa17.8■□□□□ 0.44
RBFOX1-218ENST00000569889 USP35Q9P2H5 1018 aa17.8■□□□□ 0.44
RBFOX1-218ENST00000569889 COL14A1Q05707 1796 aaKnown RBP17.79■□□□□ 0.44
RBFOX1-218ENST00000569889 ACEP12821 1306 aa17.79■□□□□ 0.44
RBFOX1-218ENST00000569889 NEUROD1Q13562 356 aa17.79■□□□□ 0.44
RBFOX1-218ENST00000569889 NBPF8Q3BBV2 869 aa17.79■□□□□ 0.44
RBFOX1-218ENST00000569889 NRAPQ86VF7 1730 aa17.78■□□□□ 0.44
RBFOX1-218ENST00000569889 ONECUT3O60422 494 aaPredicted RBP17.78■□□□□ 0.44
RBFOX1-218ENST00000569889 EVA1CP58658 441 aa17.78■□□□□ 0.44
RBFOX1-218ENST00000569889 CABP2Q9NPB3 220 aa17.78■□□□□ 0.44
RBFOX1-218ENST00000569889 KIAA0232Q92628 1395 aa17.78■□□□□ 0.44
RBFOX1-218ENST00000569889 ABTB2Q8N961 1025 aa17.77■□□□□ 0.44
RBFOX1-218ENST00000569889 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.44
RBFOX1-218ENST00000569889 CCDC61Q9Y6R9 512 aa17.77■□□□□ 0.44
RBFOX1-218ENST00000569889 ATP7BP35670 1465 aa17.76■□□□□ 0.43
RBFOX1-218ENST00000569889 SPATA31A5Q5VU36 1347 aa17.75■□□□□ 0.43
RBFOX1-218ENST00000569889 SPATA31A7Q8IWB4 1347 aa17.75■□□□□ 0.43
RBFOX1-218ENST00000569889 EP400Q96L91 3159 aa17.75■□□□□ 0.43
RBFOX1-218ENST00000569889 PSDA5PKW4 1024 aaPredicted RBP17.75■□□□□ 0.43
RBFOX1-218ENST00000569889 BAG6P46379 1132 aa17.74■□□□□ 0.43
RBFOX1-218ENST00000569889 CENPJQ9HC77 1338 aaPredicted RBP17.73■□□□□ 0.43
RBFOX1-218ENST00000569889 CRYBG1Q9Y4K1 1723 aa17.73■□□□□ 0.43
RBFOX1-218ENST00000569889 EN1Q05925 392 aaPredicted RBP17.73■□□□□ 0.43
RBFOX1-218ENST00000569889 L3MBTL2Q969R5 705 aa17.73■□□□□ 0.43
RBFOX1-218ENST00000569889 KIAA1210Q9ULL0 1709 aa17.72■□□□□ 0.43
RBFOX1-218ENST00000569889 PLEKHG3A1L390 1219 aa17.71■□□□□ 0.43
RBFOX1-218ENST00000569889 PHRF1Q9P1Y6 1649 aaKnown RBP17.71■□□□□ 0.43
RBFOX1-218ENST00000569889 PPIP5K1Q6PFW1 1433 aa17.71■□□□□ 0.43
RBFOX1-218ENST00000569889 CABP1Q9NZU7 370 aa17.7■□□□□ 0.42
RBFOX1-218ENST00000569889 SPATA31A1Q5TZJ5 1347 aa17.7■□□□□ 0.42
RBFOX1-218ENST00000569889 TOPAZ1Q8N9V7 1692 aa17.69■□□□□ 0.42
RBFOX1-218ENST00000569889 POLR3AO14802 1390 aaPredicted RBP17.68■□□□□ 0.42
RBFOX1-218ENST00000569889 QRICH2Q9H0J4 1663 aa17.68■□□□□ 0.42
RBFOX1-218ENST00000569889 TRIM37O94972 964 aa17.68■□□□□ 0.42
RBFOX1-218ENST00000569889 LARP1Q6PKG0 1096 aaKnown RBP17.68■□□□□ 0.42
RBFOX1-218ENST00000569889 NLRP13Q86W25 1043 aa17.68■□□□□ 0.42
RBFOX1-218ENST00000569889 PDE3BQ13370 1112 aa17.67■□□□□ 0.42
RBFOX1-218ENST00000569889 SOX12O15370 315 aa17.66■□□□□ 0.42
RBFOX1-218ENST00000569889 NLRP6P59044 892 aa17.66■□□□□ 0.42
RBFOX1-218ENST00000569889 GCP02774 474 aa17.65■□□□□ 0.42
RBFOX1-218ENST00000569889 EZH2Q15910 746 aaKnown RBP17.65■□□□□ 0.42
RBFOX1-218ENST00000569889 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
RBFOX1-218ENST00000569889 APBA3O96018 575 aa17.64■□□□□ 0.41
RBFOX1-218ENST00000569889 R3HDM1Q15032 1099 aaKnown RBP17.64■□□□□ 0.41
RBFOX1-218ENST00000569889 SSH2Q76I76 1423 aa17.64■□□□□ 0.41
RBFOX1-218ENST00000569889 FAM196AQ6ZSG2 479 aa17.63■□□□□ 0.41
RBFOX1-218ENST00000569889 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
RBFOX1-218ENST00000569889 THSD7AQ9UPZ6 1657 aa17.62■□□□□ 0.41
RBFOX1-218ENST00000569889 TCP11L2Q8N4U5 519 aa17.62■□□□□ 0.41
RBFOX1-218ENST00000569889 EVC2Q86UK5 1308 aa17.62■□□□□ 0.41
RBFOX1-218ENST00000569889 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
RBFOX1-218ENST00000569889 NRKQ7Z2Y5 1582 aa17.62■□□□□ 0.41
RBFOX1-218ENST00000569889 USP19O94966 1318 aa17.59■□□□□ 0.41
RBFOX1-218ENST00000569889 BARGINQ6ZT62 677 aa17.58■□□□□ 0.4
RBFOX1-218ENST00000569889 TOM1L2Q6ZVM7 507 aa17.58■□□□□ 0.4
RBFOX1-218ENST00000569889 TRPM1Q7Z4N2 1603 aa17.58■□□□□ 0.4
RBFOX1-218ENST00000569889 USP6P35125 1406 aa17.57■□□□□ 0.4
RBFOX1-218ENST00000569889 TNS1Q9HBL0 1735 aaKnown RBP17.57■□□□□ 0.4
RBFOX1-218ENST00000569889 CPDO75976 1380 aa17.56■□□□□ 0.4
RBFOX1-218ENST00000569889 CSB-PGBD3P0DP91 1061 aa17.56■□□□□ 0.4
RBFOX1-218ENST00000569889 TMC1Q8TDI8 760 aa17.55■□□□□ 0.4
RBFOX1-218ENST00000569889 CAMKK2Q96RR4 588 aa17.55■□□□□ 0.4
RBFOX1-218ENST00000569889 LMO7Q8WWI1 1683 aa17.55■□□□□ 0.4
RBFOX1-218ENST00000569889 TTC21BQ7Z4L5 1316 aa17.54■□□□□ 0.4
RBFOX1-218ENST00000569889 RGPD5Q99666 1765 aa17.54■□□□□ 0.4
RBFOX1-218ENST00000569889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.54■□□□□ 0.4
RBFOX1-218ENST00000569889 COL5A2P05997 1499 aaPredicted RBP17.53■□□□□ 0.4
RBFOX1-218ENST00000569889 CARD11Q9BXL7 1154 aa17.53■□□□□ 0.4
RBFOX1-218ENST00000569889 AXIN2Q9Y2T1 843 aa17.53■□□□□ 0.4
RBFOX1-218ENST00000569889 THRAP3Q9Y2W1 955 aaKnown RBP17.53■□□□□ 0.4
RBFOX1-218ENST00000569889 ZNF692Q9BU19 519 aaPredicted RBP17.52■□□□□ 0.4
RBFOX1-218ENST00000569889 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
RBFOX1-218ENST00000569889 KAT6BQ8WYB5 2073 aa17.51■□□□□ 0.39
RBFOX1-218ENST00000569889 CRB1P82279 1406 aa17.51■□□□□ 0.39
RBFOX1-218ENST00000569889 DDB1Q16531 1140 aa17.51■□□□□ 0.39
RBFOX1-218ENST00000569889 BRD4O60885 1362 aaPredicted RBP17.51■□□□□ 0.39
RBFOX1-218ENST00000569889 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
RBFOX1-218ENST00000569889 NBPF14Q5TI25 921 aa17.5■□□□□ 0.39
RBFOX1-218ENST00000569889 AATKQ6ZMQ8 1374 aa17.5■□□□□ 0.39
RBFOX1-218ENST00000569889 AKAP12Q02952 1782 aa17.49■□□□□ 0.39
RBFOX1-218ENST00000569889 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
RBFOX1-218ENST00000569889 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
RBFOX1-218ENST00000569889 SLIT3O75094 1523 aa17.47■□□□□ 0.39
RBFOX1-218ENST00000569889 LRP5O75197 1615 aa17.47■□□□□ 0.39
RBFOX1-218ENST00000569889 ARHGEF25Q86VW2 580 aa17.47■□□□□ 0.39
RBFOX1-218ENST00000569889 COL18A1P39060 1754 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms