RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-215ENST00000569189 CDK12Q9NYV4 1490 aaPredicted RBP34.59■■■■□ 3.13
GGA2-215ENST00000569189 CLSPNQ9HAW4 1339 aa34.59■■■■□ 3.13
GGA2-215ENST00000569189 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.59■■■■□ 3.13
GGA2-215ENST00000569189 RBM6P78332 1123 aaKnown RBP34.56■■■■□ 3.12
GGA2-215ENST00000569189 SBNO2Q9Y2G9 1366 aa34.56■■■■□ 3.12
GGA2-215ENST00000569189 BCL9LQ86UU0 1499 aa34.56■■■■□ 3.12
GGA2-215ENST00000569189 PLCH1Q4KWH8 1693 aa34.56■■■■□ 3.12
GGA2-215ENST00000569189 TRPC5Q9UL62 973 aaPredicted RBP34.55■■■■□ 3.12
GGA2-215ENST00000569189 ATRNO75882 1429 aa34.55■■■■□ 3.12
GGA2-215ENST00000569189 SLIT2O94813 1529 aa34.54■■■■□ 3.12
GGA2-215ENST00000569189 NWD2Q9ULI1 1742 aa34.52■■■■□ 3.12
GGA2-215ENST00000569189 CABP1Q9NZU7 370 aa34.5■■■■□ 3.11
GGA2-215ENST00000569189 PHRF1Q9P1Y6 1649 aaKnown RBP34.5■■■■□ 3.11
GGA2-215ENST00000569189 RGS12O14924 1447 aa34.48■■■■□ 3.11
GGA2-215ENST00000569189 UNC5CLQ8IV45 518 aa34.46■■■■□ 3.11
GGA2-215ENST00000569189 ATAD2Q6PL18 1390 aa34.46■■■■□ 3.11
GGA2-215ENST00000569189 AKAP12Q02952 1782 aa34.46■■■■□ 3.11
GGA2-215ENST00000569189 COL14A1Q05707 1796 aaKnown RBP34.45■■■■□ 3.11
GGA2-215ENST00000569189 TIMELESSQ9UNS1 1208 aa34.45■■■■□ 3.11
GGA2-215ENST00000569189 BRD4O60885 1362 aaPredicted RBP34.44■■■■□ 3.1
GGA2-215ENST00000569189 USP6P35125 1406 aa34.44■■■■□ 3.1
GGA2-215ENST00000569189 FAM83GA6ND36 823 aa34.41■■■■□ 3.1
GGA2-215ENST00000569189 NUTM2GQ5VZR2 741 aa34.41■■■■□ 3.1
GGA2-215ENST00000569189 NRAPQ86VF7 1730 aa34.41■■■■□ 3.1
GGA2-215ENST00000569189 ABTB2Q8N961 1025 aa34.4■■■■□ 3.1
GGA2-215ENST00000569189 CCER1Q8TC90 406 aaPredicted RBP34.38■■■■□ 3.09
GGA2-215ENST00000569189 GLI3P10071 1580 aa34.37■■■■□ 3.09
GGA2-215ENST00000569189 NRKQ7Z2Y5 1582 aa34.37■■■■□ 3.09
GGA2-215ENST00000569189 GJD4Q96KN9 370 aaPredicted RBP34.37■■■■□ 3.09
GGA2-215ENST00000569189 SSH2Q76I76 1423 aa34.35■■■■□ 3.09
GGA2-215ENST00000569189 ST20-MTHFSA0A0A6YYL1 179 aa34.34■■■■□ 3.09
GGA2-215ENST00000569189 MON2Q7Z3U7 1717 aa34.34■■■■□ 3.09
GGA2-215ENST00000569189 PIK3C2AO00443 1686 aa34.34■■■■□ 3.09
GGA2-215ENST00000569189 USP19O94966 1318 aa34.33■■■■□ 3.09
GGA2-215ENST00000569189 CPSF1Q10570 1443 aaKnown RBP34.32■■■■□ 3.08
GGA2-215ENST00000569189 VPS72Q15906 364 aa34.32■■■■□ 3.08
GGA2-215ENST00000569189 TESK2Q96S53 571 aa34.32■■■■□ 3.08
GGA2-215ENST00000569189 ZNF692Q9BU19 519 aaPredicted RBP34.32■■■■□ 3.08
GGA2-215ENST00000569189 PRDM11Q9NQV5 511 aa34.32■■■■□ 3.08
GGA2-215ENST00000569189 KIAA0232Q92628 1395 aa34.32■■■■□ 3.08
GGA2-215ENST00000569189 USP47Q96K76 1375 aa34.32■■■■□ 3.08
GGA2-215ENST00000569189 NLRP13Q86W25 1043 aa34.31■■■■□ 3.08
GGA2-215ENST00000569189 BTG4Q9NY30 223 aa34.31■■■■□ 3.08
GGA2-215ENST00000569189 KTN1Q86UP2 1357 aaKnown RBP34.27■■■■□ 3.08
GGA2-215ENST00000569189 ZC3H6P61129 1189 aaKnown RBP34.27■■■■□ 3.08
GGA2-215ENST00000569189 PUS7Q96PZ0 661 aaKnown RBP34.27■■■■□ 3.08
GGA2-215ENST00000569189 SLC24A1O60721 1099 aa34.25■■■■□ 3.07
GGA2-215ENST00000569189 CCDC9Q9Y3X0 531 aaKnown RBP34.25■■■■□ 3.07
GGA2-215ENST00000569189 CD163L1Q9NR16 1453 aa34.25■■■■□ 3.07
GGA2-215ENST00000569189 TTC21BQ7Z4L5 1316 aa34.25■■■■□ 3.07
GGA2-215ENST00000569189 SLIT3O75094 1523 aa34.25■■■■□ 3.07
GGA2-215ENST00000569189 NLRP6P59044 892 aa34.24■■■■□ 3.07
GGA2-215ENST00000569189 TMC1Q8TDI8 760 aa34.24■■■■□ 3.07
GGA2-215ENST00000569189 CHRNA2Q15822 529 aa34.23■■■■□ 3.07
GGA2-215ENST00000569189 CPDO75976 1380 aa34.23■■■■□ 3.07
GGA2-215ENST00000569189 UPF1Q92900 1129 aaKnown RBP eCLIP34.22■■■■□ 3.07
GGA2-215ENST00000569189 TTC21AQ8NDW8 1320 aa34.22■■■■□ 3.07
GGA2-215ENST00000569189 BRWD3Q6RI45 1802 aa34.21■■■■□ 3.07
GGA2-215ENST00000569189 GCP02774 474 aa34.21■■■■□ 3.07
GGA2-215ENST00000569189 LMO7Q8WWI1 1683 aa34.2■■■■□ 3.07
GGA2-215ENST00000569189 SLC12A5Q9H2X9 1139 aa34.19■■■■□ 3.06
GGA2-215ENST00000569189 HDGFL2Q7Z4V5 671 aaPredicted RBP34.17■■■■□ 3.06
GGA2-215ENST00000569189 NINLQ9Y2I6 1382 aa34.17■■■■□ 3.06
GGA2-215ENST00000569189 EP400Q96L91 3159 aa34.15■■■■□ 3.06
GGA2-215ENST00000569189 USP54Q70EL1 1684 aa34.15■■■■□ 3.06
GGA2-215ENST00000569189 A0A1W2PP64 1363 aa34.14■■■■□ 3.06
GGA2-215ENST00000569189 TMF1P82094 1093 aa34.14■■■■□ 3.06
GGA2-215ENST00000569189 TERF2IPQ9NYB0 399 aa34.14■■■■□ 3.06
GGA2-215ENST00000569189 CAMTA1Q9Y6Y1 1673 aa34.14■■■■□ 3.06
GGA2-215ENST00000569189 SPATA31A5Q5VU36 1347 aa34.13■■■■□ 3.05
GGA2-215ENST00000569189 SPATA31A7Q8IWB4 1347 aa34.13■■■■□ 3.05
GGA2-215ENST00000569189 EDC4Q6P2E9 1401 aaKnown RBP34.13■■■■□ 3.05
GGA2-215ENST00000569189 ONECUT3O60422 494 aaPredicted RBP34.12■■■■□ 3.05
GGA2-215ENST00000569189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.11■■■■□ 3.05
GGA2-215ENST00000569189 SEPT12Q8IYM1 358 aa34.11■■■■□ 3.05
GGA2-215ENST00000569189 STRN4Q9NRL3 753 aa34.11■■■■□ 3.05
GGA2-215ENST00000569189 FAM98CQ17RN3 349 aaKnown RBP34.08■■■■□ 3.05
GGA2-215ENST00000569189 COL18A1P39060 1754 aa34.08■■■■□ 3.05
GGA2-215ENST00000569189 ZBTB7CA1YPR0 619 aa34.07■■■■□ 3.04
GGA2-215ENST00000569189 KCNH5Q8NCM2 988 aa34.07■■■■□ 3.04
GGA2-215ENST00000569189 NFAT5O94916 1531 aa34.07■■■■□ 3.04
GGA2-215ENST00000569189 USP31Q70CQ4 1352 aa34.07■■■■□ 3.04
GGA2-215ENST00000569189 THSD7AQ9UPZ6 1657 aa34.06■■■■□ 3.04
GGA2-215ENST00000569189 EVA1CP58658 441 aa34.06■■■■□ 3.04
GGA2-215ENST00000569189 SPATA31A1Q5TZJ5 1347 aa34.05■■■■□ 3.04
GGA2-215ENST00000569189 A0A0G2JS52 829 aa34.05■■■■□ 3.04
GGA2-215ENST00000569189 MYT1Q01538 1121 aa34.05■■■■□ 3.04
GGA2-215ENST00000569189 NME9Q86XW9 330 aa34.05■■■■□ 3.04
GGA2-215ENST00000569189 AATKQ6ZMQ8 1374 aa34.05■■■■□ 3.04
GGA2-215ENST00000569189 COL5A2P05997 1499 aaPredicted RBP34.05■■■■□ 3.04
GGA2-215ENST00000569189 CDCA8Q53HL2 280 aa34.04■■■■□ 3.04
GGA2-215ENST00000569189 ZRANB1Q9UGI0 708 aa34.03■■■■□ 3.04
GGA2-215ENST00000569189 SOX12O15370 315 aa34.02■■■■□ 3.04
GGA2-215ENST00000569189 ANKRD36BQ8N2N9 1353 aa34.01■■■■□ 3.04
GGA2-215ENST00000569189 RGPD5Q99666 1765 aa34.01■■■■□ 3.04
GGA2-215ENST00000569189 MYOM1P52179 1685 aa34■■■■□ 3.03
GGA2-215ENST00000569189 LARP1Q6PKG0 1096 aaKnown RBP34■■■■□ 3.03
GGA2-215ENST00000569189 ARHGEF25Q86VW2 580 aa33.99■■■■□ 3.03
GGA2-215ENST00000569189 LTN1O94822 1766 aa33.98■■■■□ 3.03
GGA2-215ENST00000569189 KRT27Q7Z3Y8 459 aa33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms