RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TRPM3Q9HCF6 1732 aaPredicted RBP17.47■□□□□ 0.39
GTF3C1-209ENST00000568569 PRR36Q9H6K5 1346 aa17.47■□□□□ 0.39
GTF3C1-209ENST00000568569 ADGRB1O14514 1584 aa17.46■□□□□ 0.39
GTF3C1-209ENST00000568569 R3HDM1Q15032 1099 aaKnown RBP17.46■□□□□ 0.39
GTF3C1-209ENST00000568569 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
GTF3C1-209ENST00000568569 TRAK1Q9UPV9 953 aa17.46■□□□□ 0.39
GTF3C1-209ENST00000568569 TULP4Q9NRJ4 1543 aa17.46■□□□□ 0.39
GTF3C1-209ENST00000568569 MINK1Q8N4C8 1332 aaPredicted RBP17.46■□□□□ 0.38
GTF3C1-209ENST00000568569 NGDNQ8NEJ9 315 aaKnown RBP17.45■□□□□ 0.38
GTF3C1-209ENST00000568569 ALS2Q96Q42 1657 aa17.45■□□□□ 0.38
GTF3C1-209ENST00000568569 WASLO00401 505 aaPredicted RBP17.44■□□□□ 0.38
GTF3C1-209ENST00000568569 PAK3O75914 559 aaPredicted RBP17.44■□□□□ 0.38
GTF3C1-209ENST00000568569 RGPD1P0DJD0 1748 aa17.44■□□□□ 0.38
GTF3C1-209ENST00000568569 THSD7AQ9UPZ6 1657 aa17.43■□□□□ 0.38
GTF3C1-209ENST00000568569 EZH2Q15910 746 aaKnown RBP17.42■□□□□ 0.38
GTF3C1-209ENST00000568569 SPATA31A1Q5TZJ5 1347 aa17.42■□□□□ 0.38
GTF3C1-209ENST00000568569 FAM196AQ6ZSG2 479 aa17.41■□□□□ 0.38
GTF3C1-209ENST00000568569 KIAA0232Q92628 1395 aa17.4■□□□□ 0.38
GTF3C1-209ENST00000568569 TRIM37O94972 964 aa17.4■□□□□ 0.38
GTF3C1-209ENST00000568569 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
GTF3C1-209ENST00000568569 CAMKK2Q96RR4 588 aa17.39■□□□□ 0.37
GTF3C1-209ENST00000568569 CHRNA2Q15822 529 aa17.38■□□□□ 0.37
GTF3C1-209ENST00000568569 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
GTF3C1-209ENST00000568569 TNS1Q9HBL0 1735 aaKnown RBP17.38■□□□□ 0.37
GTF3C1-209ENST00000568569 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
GTF3C1-209ENST00000568569 ATP7BP35670 1465 aa17.37■□□□□ 0.37
GTF3C1-209ENST00000568569 APBA3O96018 575 aa17.36■□□□□ 0.37
GTF3C1-209ENST00000568569 DCAF11Q8TEB1 546 aa17.36■□□□□ 0.37
GTF3C1-209ENST00000568569 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
GTF3C1-209ENST00000568569 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
GTF3C1-209ENST00000568569 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
GTF3C1-209ENST00000568569 BARGINQ6ZT62 677 aa17.35■□□□□ 0.37
GTF3C1-209ENST00000568569 NUDT16Q96DE0 195 aaKnown RBP17.35■□□□□ 0.37
GTF3C1-209ENST00000568569 PDE3BQ13370 1112 aa17.34■□□□□ 0.37
GTF3C1-209ENST00000568569 USP35Q9P2H5 1018 aa17.34■□□□□ 0.37
GTF3C1-209ENST00000568569 SSH2Q76I76 1423 aa17.33■□□□□ 0.36
GTF3C1-209ENST00000568569 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
GTF3C1-209ENST00000568569 EVA1CP58658 441 aa17.33■□□□□ 0.36
GTF3C1-209ENST00000568569 NUTM2GQ5VZR2 741 aa17.32■□□□□ 0.36
GTF3C1-209ENST00000568569 POLR3AO14802 1390 aaPredicted RBP17.31■□□□□ 0.36
GTF3C1-209ENST00000568569 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
GTF3C1-209ENST00000568569 PHRF1Q9P1Y6 1649 aaKnown RBP17.31■□□□□ 0.36
GTF3C1-209ENST00000568569 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
GTF3C1-209ENST00000568569 NBPF8Q3BBV2 869 aa17.3■□□□□ 0.36
GTF3C1-209ENST00000568569 NBPF14Q5TI25 921 aa17.3■□□□□ 0.36
GTF3C1-209ENST00000568569 CDK19Q9BWU1 502 aa17.3■□□□□ 0.36
GTF3C1-209ENST00000568569 CCDC61Q9Y6R9 512 aa17.3■□□□□ 0.36
GTF3C1-209ENST00000568569 CPDO75976 1380 aa17.29■□□□□ 0.36
GTF3C1-209ENST00000568569 ACEP12821 1306 aa17.29■□□□□ 0.36
GTF3C1-209ENST00000568569 LARP1Q6PKG0 1096 aaKnown RBP17.29■□□□□ 0.36
GTF3C1-209ENST00000568569 ABTB2Q8N961 1025 aa17.28■□□□□ 0.36
GTF3C1-209ENST00000568569 THRAP3Q9Y2W1 955 aaKnown RBP17.28■□□□□ 0.36
GTF3C1-209ENST00000568569 USP19O94966 1318 aa17.27■□□□□ 0.36
GTF3C1-209ENST00000568569 YY1P25490 414 aa17.27■□□□□ 0.36
GTF3C1-209ENST00000568569 NRKQ7Z2Y5 1582 aa17.27■□□□□ 0.35
GTF3C1-209ENST00000568569 ARHGEF28Q8N1W1 1705 aaKnown RBP17.27■□□□□ 0.35
GTF3C1-209ENST00000568569 CAMTA1Q9Y6Y1 1673 aa17.26■□□□□ 0.35
GTF3C1-209ENST00000568569 PLEKHG3A1L390 1219 aa17.26■□□□□ 0.35
GTF3C1-209ENST00000568569 C11orf95C9JLR9 678 aaPredicted RBP17.26■□□□□ 0.35
GTF3C1-209ENST00000568569 RREB1Q92766 1687 aa17.26■□□□□ 0.35
GTF3C1-209ENST00000568569 PPP1R1BQ9UD71 204 aaPredicted RBP17.25■□□□□ 0.35
GTF3C1-209ENST00000568569 SPON1Q9HCB6 807 aa17.24■□□□□ 0.35
GTF3C1-209ENST00000568569 NLRP13Q86W25 1043 aa17.23■□□□□ 0.35
GTF3C1-209ENST00000568569 NUP188Q5SRE5 1749 aa17.23■□□□□ 0.35
GTF3C1-209ENST00000568569 TOPAZ1Q8N9V7 1692 aa17.23■□□□□ 0.35
GTF3C1-209ENST00000568569 LMO7Q8WWI1 1683 aa17.23■□□□□ 0.35
GTF3C1-209ENST00000568569 KCNQ2O43526 872 aa17.22■□□□□ 0.35
GTF3C1-209ENST00000568569 GCP02774 474 aa17.22■□□□□ 0.35
GTF3C1-209ENST00000568569 NINLQ9Y2I6 1382 aa17.22■□□□□ 0.35
GTF3C1-209ENST00000568569 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
GTF3C1-209ENST00000568569 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
GTF3C1-209ENST00000568569 OVOS2A0A0G2JMS6 1433 aa17.21■□□□□ 0.34
GTF3C1-209ENST00000568569 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.34
GTF3C1-209ENST00000568569 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.34
GTF3C1-209ENST00000568569 CRB1P82279 1406 aa17.2■□□□□ 0.34
GTF3C1-209ENST00000568569 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
GTF3C1-209ENST00000568569 SRPK2P78362 688 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-209ENST00000568569 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
GTF3C1-209ENST00000568569 PARP4Q9UKK3 1724 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-209ENST00000568569 PLSCR1O15162 318 aa17.17■□□□□ 0.34
GTF3C1-209ENST00000568569 UTRNP46939 3433 aa17.17■□□□□ 0.34
GTF3C1-209ENST00000568569 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
GTF3C1-209ENST00000568569 DDB1Q16531 1140 aa17.16■□□□□ 0.34
GTF3C1-209ENST00000568569 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
GTF3C1-209ENST00000568569 NLRP6P59044 892 aa17.14■□□□□ 0.33
GTF3C1-209ENST00000568569 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
GTF3C1-209ENST00000568569 ANO8Q9HCE9 1232 aaPredicted RBP17.14■□□□□ 0.33
GTF3C1-209ENST00000568569 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
GTF3C1-209ENST00000568569 CENPJQ9HC77 1338 aaPredicted RBP17.14■□□□□ 0.33
GTF3C1-209ENST00000568569 USP6P35125 1406 aa17.13■□□□□ 0.33
GTF3C1-209ENST00000568569 NBPF1Q3BBV0 1214 aa17.13■□□□□ 0.33
GTF3C1-209ENST00000568569 TOM1L2Q6ZVM7 507 aa17.13■□□□□ 0.33
GTF3C1-209ENST00000568569 PEAK1Q9H792 1746 aa17.13■□□□□ 0.33
GTF3C1-209ENST00000568569 LRRC37A3O60309 1634 aa17.12■□□□□ 0.33
GTF3C1-209ENST00000568569 KIAA1210Q9ULL0 1709 aa17.12■□□□□ 0.33
GTF3C1-209ENST00000568569 RGPD3A6NKT7 1758 aaPredicted RBP17.12■□□□□ 0.33
GTF3C1-209ENST00000568569 RGPD4Q7Z3J3 1758 aa17.12■□□□□ 0.33
GTF3C1-209ENST00000568569 SLIT3O75094 1523 aa17.11■□□□□ 0.33
GTF3C1-209ENST00000568569 CDCA7Q9BWT1 371 aaPredicted RBP17.11■□□□□ 0.33
GTF3C1-209ENST00000568569 BCL9O00512 1426 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms