RNA–Protein interactions for RNA: ENST00000568562.1

ATP6V0C-204, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

TSL 3 BASIC

Gene ATP6V0C, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-204ENST00000568562 ITSN1Q15811 1721 aa27.52■■■□□ 2
ATP6V0C-204ENST00000568562 EIF3AQ14152 1382 aaKnown RBP27.51■■□□□ 1.99
ATP6V0C-204ENST00000568562 ARHGEF28Q8N1W1 1705 aaKnown RBP27.5■■□□□ 1.99
ATP6V0C-204ENST00000568562 RAB3GAP2Q9H2M9 1393 aa27.49■■□□□ 1.99
ATP6V0C-204ENST00000568562 BAG6P46379 1132 aa27.49■■□□□ 1.99
ATP6V0C-204ENST00000568562 THSD7AQ9UPZ6 1657 aa27.49■■□□□ 1.99
ATP6V0C-204ENST00000568562 TNS1Q9HBL0 1735 aaKnown RBP27.48■■□□□ 1.99
ATP6V0C-204ENST00000568562 PSDA5PKW4 1024 aaPredicted RBP27.48■■□□□ 1.99
ATP6V0C-204ENST00000568562 PHRF1Q9P1Y6 1649 aaKnown RBP27.46■■□□□ 1.99
ATP6V0C-204ENST00000568562 KDM2AQ9Y2K7 1162 aa27.46■■□□□ 1.99
ATP6V0C-204ENST00000568562 WASLO00401 505 aaPredicted RBP27.45■■□□□ 1.98
ATP6V0C-204ENST00000568562 FAM182BQ5T319 152 aa27.45■■□□□ 1.98
ATP6V0C-204ENST00000568562 PAK3O75914 559 aaPredicted RBP27.44■■□□□ 1.98
ATP6V0C-204ENST00000568562 NGDNQ8NEJ9 315 aaKnown RBP27.44■■□□□ 1.98
ATP6V0C-204ENST00000568562 SPATA31A5Q5VU36 1347 aa27.43■■□□□ 1.98
ATP6V0C-204ENST00000568562 SPATA31A7Q8IWB4 1347 aa27.43■■□□□ 1.98
ATP6V0C-204ENST00000568562 ATP7BP35670 1465 aa27.42■■□□□ 1.98
ATP6V0C-204ENST00000568562 EN1Q05925 392 aaPredicted RBP27.41■■□□□ 1.98
ATP6V0C-204ENST00000568562 DCAF11Q8TEB1 546 aa27.41■■□□□ 1.98
ATP6V0C-204ENST00000568562 PRDM11Q9NQV5 511 aa27.41■■□□□ 1.98
ATP6V0C-204ENST00000568562 HRCP23327 699 aa27.39■■□□□ 1.98
ATP6V0C-204ENST00000568562 TOPAZ1Q8N9V7 1692 aa27.37■■□□□ 1.97
ATP6V0C-204ENST00000568562 KIAA0232Q92628 1395 aa27.36■■□□□ 1.97
ATP6V0C-204ENST00000568562 DISP2A7MBM2 1401 aa27.34■■□□□ 1.97
ATP6V0C-204ENST00000568562 CHRNA2Q15822 529 aa27.34■■□□□ 1.97
ATP6V0C-204ENST00000568562 NUDT16Q96DE0 195 aaKnown RBP27.33■■□□□ 1.97
ATP6V0C-204ENST00000568562 STRN4Q9NRL3 753 aa27.33■■□□□ 1.97
ATP6V0C-204ENST00000568562 SPATA31A1Q5TZJ5 1347 aa27.33■■□□□ 1.97
ATP6V0C-204ENST00000568562 R3HDM1Q15032 1099 aaKnown RBP27.32■■□□□ 1.96
ATP6V0C-204ENST00000568562 NRKQ7Z2Y5 1582 aa27.31■■□□□ 1.96
ATP6V0C-204ENST00000568562 EZH2Q15910 746 aaKnown RBP27.3■■□□□ 1.96
ATP6V0C-204ENST00000568562 NUTM2GQ5VZR2 741 aa27.3■■□□□ 1.96
ATP6V0C-204ENST00000568562 ZC3H6P61129 1189 aaKnown RBP27.29■■□□□ 1.96
ATP6V0C-204ENST00000568562 STAC3Q96MF2 364 aa27.27■■□□□ 1.96
ATP6V0C-204ENST00000568562 TRIM37O94972 964 aa27.26■■□□□ 1.95
ATP6V0C-204ENST00000568562 USP35Q9P2H5 1018 aa27.26■■□□□ 1.95
ATP6V0C-204ENST00000568562 RREB1Q92766 1687 aa27.26■■□□□ 1.95
ATP6V0C-204ENST00000568562 KIAA1210Q9ULL0 1709 aa27.25■■□□□ 1.95
ATP6V0C-204ENST00000568562 CDK19Q9BWU1 502 aa27.25■■□□□ 1.95
ATP6V0C-204ENST00000568562 SSH2Q76I76 1423 aa27.24■■□□□ 1.95
ATP6V0C-204ENST00000568562 POLR3AO14802 1390 aaPredicted RBP27.24■■□□□ 1.95
ATP6V0C-204ENST00000568562 LMO7Q8WWI1 1683 aa27.24■■□□□ 1.95
ATP6V0C-204ENST00000568562 FAM196AQ6ZSG2 479 aa27.24■■□□□ 1.95
ATP6V0C-204ENST00000568562 NUP188Q5SRE5 1749 aa27.24■■□□□ 1.95
ATP6V0C-204ENST00000568562 ACEP12821 1306 aa27.23■■□□□ 1.95
ATP6V0C-204ENST00000568562 CAMTA1Q9Y6Y1 1673 aa27.22■■□□□ 1.95
ATP6V0C-204ENST00000568562 CAMKK2Q96RR4 588 aa27.21■■□□□ 1.95
ATP6V0C-204ENST00000568562 EVA1CP58658 441 aa27.2■■□□□ 1.94
ATP6V0C-204ENST00000568562 NBPF8Q3BBV2 869 aa27.2■■□□□ 1.94
ATP6V0C-204ENST00000568562 APBA3O96018 575 aa27.19■■□□□ 1.94
ATP6V0C-204ENST00000568562 CCDC61Q9Y6R9 512 aa27.19■■□□□ 1.94
ATP6V0C-204ENST00000568562 LARP1Q6PKG0 1096 aaKnown RBP27.17■■□□□ 1.94
ATP6V0C-204ENST00000568562 BARGINQ6ZT62 677 aa27.17■■□□□ 1.94
ATP6V0C-204ENST00000568562 ABTB2Q8N961 1025 aa27.17■■□□□ 1.94
ATP6V0C-204ENST00000568562 PARD3Q8TEW0 1356 aa27.17■■□□□ 1.94
ATP6V0C-204ENST00000568562 PARP4Q9UKK3 1724 aaKnown RBP27.16■■□□□ 1.94
ATP6V0C-204ENST00000568562 PDE3BQ13370 1112 aa27.16■■□□□ 1.94
ATP6V0C-204ENST00000568562 PLEKHG3A1L390 1219 aa27.15■■□□□ 1.94
ATP6V0C-204ENST00000568562 USP19O94966 1318 aa27.15■■□□□ 1.94
ATP6V0C-204ENST00000568562 CPDO75976 1380 aa27.14■■□□□ 1.94
ATP6V0C-204ENST00000568562 QRICH2Q9H0J4 1663 aa27.13■■□□□ 1.93
ATP6V0C-204ENST00000568562 TCP11L2Q8N4U5 519 aa27.12■■□□□ 1.93
ATP6V0C-204ENST00000568562 PPIP5K1Q6PFW1 1433 aa27.12■■□□□ 1.93
ATP6V0C-204ENST00000568562 COL5A2P05997 1499 aaPredicted RBP27.11■■□□□ 1.93
ATP6V0C-204ENST00000568562 SRPK2P78362 688 aaKnown RBP27.09■■□□□ 1.93
ATP6V0C-204ENST00000568562 NBPF1Q3BBV0 1214 aa27.09■■□□□ 1.93
ATP6V0C-204ENST00000568562 SBF2Q86WG5 1849 aa27.08■■□□□ 1.93
ATP6V0C-204ENST00000568562 GCP02774 474 aa27.07■■□□□ 1.92
ATP6V0C-204ENST00000568562 NLRP13Q86W25 1043 aa27.07■■□□□ 1.92
ATP6V0C-204ENST00000568562 LRRC37A3O60309 1634 aa27.07■■□□□ 1.92
ATP6V0C-204ENST00000568562 PEAK1Q9H792 1746 aa27.07■■□□□ 1.92
ATP6V0C-204ENST00000568562 WNK3Q9BYP7 1800 aa27.06■■□□□ 1.92
ATP6V0C-204ENST00000568562 THRAP3Q9Y2W1 955 aaKnown RBP27.06■■□□□ 1.92
ATP6V0C-204ENST00000568562 ZBTB7CA1YPR0 619 aa27.05■■□□□ 1.92
ATP6V0C-204ENST00000568562 CABP2Q9NPB3 220 aa27.05■■□□□ 1.92
ATP6V0C-204ENST00000568562 NBPF14Q5TI25 921 aa27.04■■□□□ 1.92
ATP6V0C-204ENST00000568562 CENPJQ9HC77 1338 aaPredicted RBP27.04■■□□□ 1.92
ATP6V0C-204ENST00000568562 CRB1P82279 1406 aa27.04■■□□□ 1.92
ATP6V0C-204ENST00000568562 RGPD3A6NKT7 1758 aaPredicted RBP27.03■■□□□ 1.92
ATP6V0C-204ENST00000568562 SLIT3O75094 1523 aa27.03■■□□□ 1.92
ATP6V0C-204ENST00000568562 RGPD4Q7Z3J3 1758 aa27.03■■□□□ 1.92
ATP6V0C-204ENST00000568562 PIK3C2AO00443 1686 aa27.02■■□□□ 1.92
ATP6V0C-204ENST00000568562 OVOS2A0A0G2JMS6 1433 aa27.01■■□□□ 1.91
ATP6V0C-204ENST00000568562 OVOS2A0A0J9YW53 1432 aa27.01■■□□□ 1.91
ATP6V0C-204ENST00000568562 USP6P35125 1406 aa27.01■■□□□ 1.91
ATP6V0C-204ENST00000568562 OVOS2Q6IE36 1432 aa27.01■■□□□ 1.91
ATP6V0C-204ENST00000568562 COL18A1P39060 1754 aa27.01■■□□□ 1.91
ATP6V0C-204ENST00000568562 AKAP12Q02952 1782 aa26.99■■□□□ 1.91
ATP6V0C-204ENST00000568562 RGPD5Q99666 1765 aa26.99■■□□□ 1.91
ATP6V0C-204ENST00000568562 BRD4O60885 1362 aaPredicted RBP26.99■■□□□ 1.91
ATP6V0C-204ENST00000568562 NLRP6P59044 892 aa26.97■■□□□ 1.91
ATP6V0C-204ENST00000568562 CABP1Q9NZU7 370 aa26.96■■□□□ 1.91
ATP6V0C-204ENST00000568562 AATKQ6ZMQ8 1374 aa26.96■■□□□ 1.91
ATP6V0C-204ENST00000568562 PPP1R1BQ9UD71 204 aaPredicted RBP26.94■■□□□ 1.9
ATP6V0C-204ENST00000568562 C11orf95C9JLR9 678 aaPredicted RBP26.93■■□□□ 1.9
ATP6V0C-204ENST00000568562 SPON1Q9HCB6 807 aa26.93■■□□□ 1.9
ATP6V0C-204ENST00000568562 CASZ1Q86V15 1759 aa26.93■■□□□ 1.9
ATP6V0C-204ENST00000568562 TRPM1Q7Z4N2 1603 aa26.92■■□□□ 1.9
ATP6V0C-204ENST00000568562 DDB1Q16531 1140 aa26.92■■□□□ 1.9
ATP6V0C-204ENST00000568562 TOM1L2Q6ZVM7 507 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms