RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 RAB3GAP2Q9H2M9 1393 aa22.89■■□□□ 1.25
PALB2-205ENST00000567003 LRP5O75197 1615 aa22.88■■□□□ 1.25
PALB2-205ENST00000567003 GPRASP1Q5JY77 1395 aa22.88■■□□□ 1.25
PALB2-205ENST00000567003 BAG6P46379 1132 aa22.85■■□□□ 1.25
PALB2-205ENST00000567003 WASLO00401 505 aaPredicted RBP22.84■■□□□ 1.25
PALB2-205ENST00000567003 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
PALB2-205ENST00000567003 SPATA31A5Q5VU36 1347 aa22.83■■□□□ 1.25
PALB2-205ENST00000567003 SPATA31A7Q8IWB4 1347 aa22.83■■□□□ 1.25
PALB2-205ENST00000567003 RGPD1P0DJD0 1748 aa22.83■■□□□ 1.25
PALB2-205ENST00000567003 EN1Q05925 392 aaPredicted RBP22.83■■□□□ 1.25
PALB2-205ENST00000567003 NGDNQ8NEJ9 315 aaKnown RBP22.83■■□□□ 1.25
PALB2-205ENST00000567003 DCAF11Q8TEB1 546 aa22.83■■□□□ 1.25
PALB2-205ENST00000567003 EIF3AQ14152 1382 aaKnown RBP22.83■■□□□ 1.25
PALB2-205ENST00000567003 THSD7AQ9UPZ6 1657 aa22.83■■□□□ 1.24
PALB2-205ENST00000567003 ARHGEF28Q8N1W1 1705 aaKnown RBP22.82■■□□□ 1.24
PALB2-205ENST00000567003 PRDM11Q9NQV5 511 aa22.81■■□□□ 1.24
PALB2-205ENST00000567003 TNS1Q9HBL0 1735 aaKnown RBP22.8■■□□□ 1.24
PALB2-205ENST00000567003 ATP7BP35670 1465 aa22.79■■□□□ 1.24
PALB2-205ENST00000567003 HRCP23327 699 aa22.79■■□□□ 1.24
PALB2-205ENST00000567003 ITSN1Q15811 1721 aa22.79■■□□□ 1.24
PALB2-205ENST00000567003 PHRF1Q9P1Y6 1649 aaKnown RBP22.79■■□□□ 1.24
PALB2-205ENST00000567003 CHRNA2Q15822 529 aa22.78■■□□□ 1.24
PALB2-205ENST00000567003 KIAA0232Q92628 1395 aa22.77■■□□□ 1.24
PALB2-205ENST00000567003 NUTM2GQ5VZR2 741 aa22.77■■□□□ 1.24
PALB2-205ENST00000567003 R3HDM1Q15032 1099 aaKnown RBP22.75■■□□□ 1.23
PALB2-205ENST00000567003 NUDT16Q96DE0 195 aaKnown RBP22.75■■□□□ 1.23
PALB2-205ENST00000567003 STRN4Q9NRL3 753 aa22.75■■□□□ 1.23
PALB2-205ENST00000567003 SPATA31A1Q5TZJ5 1347 aa22.74■■□□□ 1.23
PALB2-205ENST00000567003 ZC3H6P61129 1189 aaKnown RBP22.72■■□□□ 1.23
PALB2-205ENST00000567003 EZH2Q15910 746 aaKnown RBP22.72■■□□□ 1.23
PALB2-205ENST00000567003 DISP2A7MBM2 1401 aa22.72■■□□□ 1.23
PALB2-205ENST00000567003 TOPAZ1Q8N9V7 1692 aa22.71■■□□□ 1.23
PALB2-205ENST00000567003 TRIM37O94972 964 aa22.7■■□□□ 1.22
PALB2-205ENST00000567003 CDK19Q9BWU1 502 aa22.7■■□□□ 1.22
PALB2-205ENST00000567003 USP35Q9P2H5 1018 aa22.69■■□□□ 1.22
PALB2-205ENST00000567003 NRKQ7Z2Y5 1582 aa22.68■■□□□ 1.22
PALB2-205ENST00000567003 ACEP12821 1306 aa22.67■■□□□ 1.22
PALB2-205ENST00000567003 SSH2Q76I76 1423 aa22.65■■□□□ 1.22
PALB2-205ENST00000567003 POLR3AO14802 1390 aaPredicted RBP22.65■■□□□ 1.22
PALB2-205ENST00000567003 CAMKK2Q96RR4 588 aa22.65■■□□□ 1.22
PALB2-205ENST00000567003 NBPF8Q3BBV2 869 aa22.64■■□□□ 1.21
PALB2-205ENST00000567003 FAM196AQ6ZSG2 479 aa22.64■■□□□ 1.21
PALB2-205ENST00000567003 CAMTA1Q9Y6Y1 1673 aa22.64■■□□□ 1.21
PALB2-205ENST00000567003 APBA3O96018 575 aa22.63■■□□□ 1.21
PALB2-205ENST00000567003 LARP1Q6PKG0 1096 aaKnown RBP22.63■■□□□ 1.21
PALB2-205ENST00000567003 LMO7Q8WWI1 1683 aa22.62■■□□□ 1.21
PALB2-205ENST00000567003 EVA1CP58658 441 aa22.62■■□□□ 1.21
PALB2-205ENST00000567003 STAC3Q96MF2 364 aa22.62■■□□□ 1.21
PALB2-205ENST00000567003 RREB1Q92766 1687 aa22.62■■□□□ 1.21
PALB2-205ENST00000567003 NUP188Q5SRE5 1749 aa22.61■■□□□ 1.21
PALB2-205ENST00000567003 ABTB2Q8N961 1025 aa22.6■■□□□ 1.21
PALB2-205ENST00000567003 CCDC61Q9Y6R9 512 aa22.6■■□□□ 1.21
PALB2-205ENST00000567003 PLEKHG3A1L390 1219 aa22.59■■□□□ 1.21
PALB2-205ENST00000567003 NBPF1Q3BBV0 1214 aa22.59■■□□□ 1.21
PALB2-205ENST00000567003 KIAA1210Q9ULL0 1709 aa22.59■■□□□ 1.21
PALB2-205ENST00000567003 USP19O94966 1318 aa22.58■■□□□ 1.21
PALB2-205ENST00000567003 PDE3BQ13370 1112 aa22.58■■□□□ 1.21
PALB2-205ENST00000567003 BARGINQ6ZT62 677 aa22.58■■□□□ 1.21
PALB2-205ENST00000567003 CPDO75976 1380 aa22.56■■□□□ 1.2
PALB2-205ENST00000567003 TCP11L2Q8N4U5 519 aa22.56■■□□□ 1.2
PALB2-205ENST00000567003 PPIP5K1Q6PFW1 1433 aa22.56■■□□□ 1.2
PALB2-205ENST00000567003 PARD3Q8TEW0 1356 aa22.55■■□□□ 1.2
PALB2-205ENST00000567003 ZBTB7CA1YPR0 619 aa22.54■■□□□ 1.2
PALB2-205ENST00000567003 SRPK2P78362 688 aaKnown RBP22.54■■□□□ 1.2
PALB2-205ENST00000567003 CABP2Q9NPB3 220 aa22.54■■□□□ 1.2
PALB2-205ENST00000567003 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
PALB2-205ENST00000567003 PARP4Q9UKK3 1724 aaKnown RBP22.53■■□□□ 1.2
PALB2-205ENST00000567003 GCP02774 474 aa22.52■■□□□ 1.2
PALB2-205ENST00000567003 ADRA2BP18089 450 aa22.52■■□□□ 1.2
PALB2-205ENST00000567003 QRICH2Q9H0J4 1663 aa22.52■■□□□ 1.2
PALB2-205ENST00000567003 NLRP13Q86W25 1043 aa22.5■■□□□ 1.19
PALB2-205ENST00000567003 CENPJQ9HC77 1338 aaPredicted RBP22.5■■□□□ 1.19
PALB2-205ENST00000567003 PEAK1Q9H792 1746 aa22.48■■□□□ 1.19
PALB2-205ENST00000567003 LRRC37A3O60309 1634 aa22.47■■□□□ 1.19
PALB2-205ENST00000567003 THRAP3Q9Y2W1 955 aaKnown RBP22.47■■□□□ 1.19
PALB2-205ENST00000567003 CRB1P82279 1406 aa22.47■■□□□ 1.19
PALB2-205ENST00000567003 NBPF14Q5TI25 921 aa22.46■■□□□ 1.19
PALB2-205ENST00000567003 USP6P35125 1406 aa22.46■■□□□ 1.19
PALB2-205ENST00000567003 SLIT3O75094 1523 aa22.46■■□□□ 1.19
PALB2-205ENST00000567003 SBF2Q86WG5 1849 aa22.45■■□□□ 1.19
PALB2-205ENST00000567003 CABP1Q9NZU7 370 aa22.45■■□□□ 1.18
PALB2-205ENST00000567003 PIK3C2AO00443 1686 aa22.45■■□□□ 1.18
PALB2-205ENST00000567003 NLRP6P59044 892 aa22.44■■□□□ 1.18
PALB2-205ENST00000567003 WNK3Q9BYP7 1800 aa22.43■■□□□ 1.18
PALB2-205ENST00000567003 COL18A1P39060 1754 aa22.43■■□□□ 1.18
PALB2-205ENST00000567003 OVOS2A0A0G2JMS6 1433 aa22.43■■□□□ 1.18
PALB2-205ENST00000567003 OVOS2A0A0J9YW53 1432 aa22.43■■□□□ 1.18
PALB2-205ENST00000567003 OVOS2Q6IE36 1432 aa22.43■■□□□ 1.18
PALB2-205ENST00000567003 PTF1AQ7RTS3 328 aa22.43■■□□□ 1.18
PALB2-205ENST00000567003 AATKQ6ZMQ8 1374 aa22.42■■□□□ 1.18
PALB2-205ENST00000567003 TOM1L2Q6ZVM7 507 aa22.4■■□□□ 1.18
PALB2-205ENST00000567003 BRD4O60885 1362 aaPredicted RBP22.39■■□□□ 1.18
PALB2-205ENST00000567003 ANO8Q9HCE9 1232 aaPredicted RBP22.39■■□□□ 1.17
PALB2-205ENST00000567003 PPP1R1BQ9UD71 204 aaPredicted RBP22.39■■□□□ 1.17
PALB2-205ENST00000567003 AXIN2Q9Y2T1 843 aa22.39■■□□□ 1.17
PALB2-205ENST00000567003 RGPD3A6NKT7 1758 aaPredicted RBP22.39■■□□□ 1.17
PALB2-205ENST00000567003 RGPD4Q7Z3J3 1758 aa22.39■■□□□ 1.17
PALB2-205ENST00000567003 RGPD5Q99666 1765 aa22.39■■□□□ 1.17
PALB2-205ENST00000567003 DDB1Q16531 1140 aa22.38■■□□□ 1.17
PALB2-205ENST00000567003 SPON1Q9HCB6 807 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms