RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 SEMA3FQ13275 785 aa8.92□□□□□ -0.98
CNOT1-209ENST00000566240 RNF19BQ6ZMZ0 732 aa8.92□□□□□ -0.98
CNOT1-209ENST00000566240 TSR3Q9UJK0 312 aaKnown RBP8.92□□□□□ -0.98
CNOT1-209ENST00000566240 PPP4CP60510 307 aa8.91□□□□□ -0.98
CNOT1-209ENST00000566240 BLOC1S3Q6QNY0 202 aa8.91□□□□□ -0.98
CNOT1-209ENST00000566240 USB1Q9BQ65 265 aaKnown RBP8.91□□□□□ -0.98
CNOT1-209ENST00000566240 TFIP11Q9UBB9 837 aaKnown RBP8.91□□□□□ -0.98
CNOT1-209ENST00000566240 SALL2Q9Y467 1007 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-209ENST00000566240 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
CNOT1-209ENST00000566240 EIF4G2P78344 907 aaKnown RBP eCLIP8.9□□□□□ -0.98
CNOT1-209ENST00000566240 BRICD5Q6PL45 260 aa8.9□□□□□ -0.98
CNOT1-209ENST00000566240 UCN2Q96RP3 112 aa8.9□□□□□ -0.98
CNOT1-209ENST00000566240 SCUBE3Q8IX30 993 aa8.89□□□□□ -0.99
CNOT1-209ENST00000566240 CSB-PGBD3P0DP91 1061 aa8.88□□□□□ -0.99
CNOT1-209ENST00000566240 NR1H3Q13133 447 aa8.88□□□□□ -0.99
CNOT1-209ENST00000566240 FMNL1O95466 1100 aaPredicted RBP8.87□□□□□ -0.99
CNOT1-209ENST00000566240 APLP1P51693 650 aa8.87□□□□□ -0.99
CNOT1-209ENST00000566240 USTQ9Y2C2 406 aa8.87□□□□□ -0.99
CNOT1-209ENST00000566240 NR1I2O75469 434 aa8.86□□□□□ -0.99
CNOT1-209ENST00000566240 RANGAP1P46060 587 aaPredicted RBP8.86□□□□□ -0.99
CNOT1-209ENST00000566240 Q6ZNB5 142 aa8.86□□□□□ -0.99
CNOT1-209ENST00000566240 NPM2Q86SE8 214 aaKnown RBP8.86□□□□□ -0.99
CNOT1-209ENST00000566240 THAP11Q96EK4 314 aa8.86□□□□□ -0.99
CNOT1-209ENST00000566240 FKBPLQ9UIM3 349 aa8.86□□□□□ -0.99
CNOT1-209ENST00000566240 PCDHB3Q9Y5E6 796 aa8.86□□□□□ -0.99
CNOT1-209ENST00000566240 ZBBXA8MT70 800 aa8.85□□□□□ -0.99
CNOT1-209ENST00000566240 F12P00748 615 aaPredicted RBP8.85□□□□□ -0.99
CNOT1-209ENST00000566240 FBXO45P0C2W1 286 aa8.85□□□□□ -0.99
CNOT1-209ENST00000566240 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
CNOT1-209ENST00000566240 MAFBQ9Y5Q3 323 aaPredicted RBP8.85□□□□□ -0.99
CNOT1-209ENST00000566240 JUNDP17535 347 aa8.84□□□□□ -0.99
CNOT1-209ENST00000566240 PTPRNQ16849 979 aa8.84□□□□□ -0.99
CNOT1-209ENST00000566240 CDCA8Q53HL2 280 aa8.84□□□□□ -0.99
CNOT1-209ENST00000566240 GZF1Q9H116 711 aaPredicted RBP8.84□□□□□ -0.99
CNOT1-209ENST00000566240 ATP9BO43861 1147 aa8.83□□□□□ -1
CNOT1-209ENST00000566240 MAP10Q9P2G4 905 aa8.83□□□□□ -1
CNOT1-209ENST00000566240 ZC3H4Q9UPT8 1303 aaKnown RBP8.82□□□□□ -1
CNOT1-209ENST00000566240 PATL2C9JE40 543 aaKnown RBP8.82□□□□□ -1
CNOT1-209ENST00000566240 ATG7O95352 703 aa8.82□□□□□ -1
CNOT1-209ENST00000566240 BRD1O95696 1058 aa8.82□□□□□ -1
CNOT1-209ENST00000566240 CTHP32929 405 aa8.81□□□□□ -1
CNOT1-209ENST00000566240 TJAP1Q5JTD0 557 aa8.81□□□□□ -1
CNOT1-209ENST00000566240 CARNS1A5YM72 827 aa8.8□□□□□ -1
CNOT1-209ENST00000566240 KCNA1Q09470 495 aa8.8□□□□□ -1
CNOT1-209ENST00000566240 VRTNQ9H8Y1 702 aa8.8□□□□□ -1
CNOT1-209ENST00000566240 MSS51Q4VC12 460 aa8.79□□□□□ -1
CNOT1-209ENST00000566240 TMCO4Q5TGY1 634 aa8.79□□□□□ -1
CNOT1-209ENST00000566240 NFATC2IPQ8NCF5 419 aa8.79□□□□□ -1
CNOT1-209ENST00000566240 EVA1BQ9NVM1 165 aa8.79□□□□□ -1
CNOT1-209ENST00000566240 PIK3CDO00329 1044 aa8.78□□□□□ -1
CNOT1-209ENST00000566240 LCE2BO14633 110 aa8.78□□□□□ -1
CNOT1-209ENST00000566240 CCNYL3P0C7X3 344 aa8.78□□□□□ -1
CNOT1-209ENST00000566240 KANK4Q5T7N3 995 aaPredicted RBP8.78□□□□□ -1
CNOT1-209ENST00000566240 FAM160A2Q8N612 972 aaPredicted RBP8.78□□□□□ -1
CNOT1-209ENST00000566240 SPSB2Q99619 263 aa8.78□□□□□ -1
CNOT1-209ENST00000566240 MTRQ99707 1265 aa8.78□□□□□ -1
CNOT1-209ENST00000566240 TMEM88BA6NKF7 163 aa8.77□□□□□ -1.01
CNOT1-209ENST00000566240 DXOO77932 396 aaKnown RBP8.77□□□□□ -1.01
CNOT1-209ENST00000566240 ARMC2Q8NEN0 867 aa8.77□□□□□ -1.01
CNOT1-209ENST00000566240 GPSM3Q9Y4H4 160 aa8.77□□□□□ -1.01
CNOT1-209ENST00000566240 SKIP12755 728 aa8.76□□□□□ -1.01
CNOT1-209ENST00000566240 MMP16P51512 607 aa8.76□□□□□ -1.01
CNOT1-209ENST00000566240 PTK2Q05397 1052 aa8.76□□□□□ -1.01
CNOT1-209ENST00000566240 KCNH2Q12809 1159 aa8.76□□□□□ -1.01
CNOT1-209ENST00000566240 PDXDC2PQ6P474 469 aa8.76□□□□□ -1.01
CNOT1-209ENST00000566240 GPKOWQ92917 476 aaPredicted RBP eCLIP8.76□□□□□ -1.01
CNOT1-209ENST00000566240 NUDT12Q9BQG2 462 aa8.76□□□□□ -1.01
CNOT1-209ENST00000566240 COPS2P61201 443 aa8.75□□□□□ -1.01
CNOT1-209ENST00000566240 LAPTM4AQ15012 233 aa8.75□□□□□ -1.01
CNOT1-209ENST00000566240 PRKD2Q9BZL6 878 aa8.75□□□□□ -1.01
CNOT1-209ENST00000566240 IL21Q9HBE4 155 aa8.75□□□□□ -1.01
CNOT1-209ENST00000566240 USP17L3A6NCW0 530 aa8.74□□□□□ -1.01
CNOT1-209ENST00000566240 USP17L4A6NCW7 530 aa8.74□□□□□ -1.01
CNOT1-209ENST00000566240 GFRA3O60609 400 aa8.74□□□□□ -1.01
CNOT1-209ENST00000566240 MFAP1P55081 439 aaKnown RBP8.74□□□□□ -1.01
CNOT1-209ENST00000566240 ELOAQ14241 798 aaKnown RBP8.74□□□□□ -1.01
CNOT1-209ENST00000566240 USP17L2Q6R6M4 530 aa8.74□□□□□ -1.01
CNOT1-209ENST00000566240 USP17L1Q7RTZ2 530 aa8.74□□□□□ -1.01
CNOT1-209ENST00000566240 PLEKHM2Q8IWE5 1019 aa8.74□□□□□ -1.01
CNOT1-209ENST00000566240 ZNF592Q92610 1267 aa8.74□□□□□ -1.01
CNOT1-209ENST00000566240 CEP126Q9P2H0 1117 aa8.74□□□□□ -1.01
CNOT1-209ENST00000566240 USP17L5A8MUK1 530 aa8.73□□□□□ -1.01
CNOT1-209ENST00000566240 MCCD1P59942 119 aaPredicted RBP8.73□□□□□ -1.01
CNOT1-209ENST00000566240 NBPF14Q5TI25 921 aa8.73□□□□□ -1.01
CNOT1-209ENST00000566240 PPP1R18Q6NYC8 613 aa8.73□□□□□ -1.01
CNOT1-209ENST00000566240 FAM174AQ8TBP5 190 aa8.73□□□□□ -1.01
CNOT1-209ENST00000566240 ZNF516Q92618 1163 aa8.73□□□□□ -1.01
CNOT1-209ENST00000566240 OCSTAMPQ9BR26 566 aa8.73□□□□□ -1.01
CNOT1-209ENST00000566240 PRDM9Q9NQV7 894 aa8.73□□□□□ -1.01
CNOT1-209ENST00000566240 SLFNL1Q499Z3 407 aa8.72□□□□□ -1.01
CNOT1-209ENST00000566240 DEPDC4Q8N2C3 294 aa8.72□□□□□ -1.01
CNOT1-209ENST00000566240 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
CNOT1-209ENST00000566240 RGS22Q8NE09 1264 aa8.71□□□□□ -1.02
CNOT1-209ENST00000566240 ZPR1O75312 459 aa8.7□□□□□ -1.02
CNOT1-209ENST00000566240 TMEM164Q5U3C3 297 aa8.7□□□□□ -1.02
CNOT1-209ENST00000566240 PHTF2Q8N3S3 785 aa8.7□□□□□ -1.02
CNOT1-209ENST00000566240 MKRN1Q9UHC7 482 aaKnown RBP8.7□□□□□ -1.02
CNOT1-209ENST00000566240 ZMIZ1Q9ULJ6 1067 aa8.7□□□□□ -1.02
CNOT1-209ENST00000566240 NOVA2Q9UNW9 492 aaKnown RBP8.7□□□□□ -1.02
CNOT1-209ENST00000566240 IVNS1ABPQ9Y6Y0 642 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms