RNA–Protein interactions for RNA: ENST00000565954.1

CCDC187-202, Transcript of coiled-coil domain containing 187, humanhuman

TSL 2

Gene CCDC187, Length 1,802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-202ENST00000565954 NRKQ7Z2Y5 1582 aa25.97■■□□□ 1.75
CCDC187-202ENST00000565954 NME9Q86XW9 330 aa25.97■■□□□ 1.75
CCDC187-202ENST00000565954 LTBP4Q8N2S1 1624 aa25.97■■□□□ 1.75
CCDC187-202ENST00000565954 TTC21BQ7Z4L5 1316 aa25.96■■□□□ 1.75
CCDC187-202ENST00000565954 PPP2R1AP30153 589 aa25.95■■□□□ 1.75
CCDC187-202ENST00000565954 NLRP13Q86W25 1043 aa25.95■■□□□ 1.74
CCDC187-202ENST00000565954 ZRANB1Q9UGI0 708 aa25.93■■□□□ 1.74
CCDC187-202ENST00000565954 ANKRD26Q9UPS8 1709 aa25.93■■□□□ 1.74
CCDC187-202ENST00000565954 SSH2Q76I76 1423 aa25.93■■□□□ 1.74
CCDC187-202ENST00000565954 FOXO3O43524 673 aa25.93■■□□□ 1.74
CCDC187-202ENST00000565954 PSME1Q06323 249 aa25.91■■□□□ 1.74
CCDC187-202ENST00000565954 BRD4O60885 1362 aaPredicted RBP25.91■■□□□ 1.74
CCDC187-202ENST00000565954 KIF1AQ12756 1690 aa25.9■■□□□ 1.74
CCDC187-202ENST00000565954 PAK3O75914 559 aaPredicted RBP25.89■■□□□ 1.74
CCDC187-202ENST00000565954 XPCQ01831 940 aaPredicted RBP25.89■■□□□ 1.74
CCDC187-202ENST00000565954 YTHDC1Q96MU7 727 aaKnown RBP25.89■■□□□ 1.74
CCDC187-202ENST00000565954 SLAIN2Q9P270 581 aa25.88■■□□□ 1.73
CCDC187-202ENST00000565954 TTC21AQ8NDW8 1320 aa25.88■■□□□ 1.73
CCDC187-202ENST00000565954 COG3Q96JB2 828 aa25.87■■□□□ 1.73
CCDC187-202ENST00000565954 DDX17Q92841 729 aaKnown RBP25.86■■□□□ 1.73
CCDC187-202ENST00000565954 FAM9BQ8IZU0 186 aa25.84■■□□□ 1.73
CCDC187-202ENST00000565954 BRINP3Q76B58 766 aa25.84■■□□□ 1.73
CCDC187-202ENST00000565954 PIK3C2AO00443 1686 aa25.83■■□□□ 1.73
CCDC187-202ENST00000565954 FBLN1P23142 703 aa25.83■■□□□ 1.73
CCDC187-202ENST00000565954 NUTM2GQ5VZR2 741 aa25.83■■□□□ 1.73
CCDC187-202ENST00000565954 KRT28Q7Z3Y7 464 aa25.83■■□□□ 1.73
CCDC187-202ENST00000565954 ABTB2Q8N961 1025 aa25.82■■□□□ 1.72
CCDC187-202ENST00000565954 MTHFSP49914 203 aa25.81■■□□□ 1.72
CCDC187-202ENST00000565954 OVOS2A0A0J9YW53 1432 aa25.8■■□□□ 1.72
CCDC187-202ENST00000565954 OVOS2Q6IE36 1432 aa25.8■■□□□ 1.72
CCDC187-202ENST00000565954 NLRP6P59044 892 aa25.79■■□□□ 1.72
CCDC187-202ENST00000565954 PNISRQ8TF01 805 aaKnown RBP25.79■■□□□ 1.72
CCDC187-202ENST00000565954 NPHP3Q7Z494 1330 aa25.78■■□□□ 1.72
CCDC187-202ENST00000565954 TRPM3Q9HCF6 1732 aaPredicted RBP25.77■■□□□ 1.72
CCDC187-202ENST00000565954 SOX12O15370 315 aa25.77■■□□□ 1.72
CCDC187-202ENST00000565954 LMOD2Q6P5Q4 547 aa25.77■■□□□ 1.72
CCDC187-202ENST00000565954 USP31Q70CQ4 1352 aa25.76■■□□□ 1.71
CCDC187-202ENST00000565954 SCAF1Q9H7N4 1312 aaKnown RBP25.76■■□□□ 1.71
CCDC187-202ENST00000565954 MAP2P11137 1827 aaKnown RBP25.76■■□□□ 1.71
CCDC187-202ENST00000565954 POLKQ9UBT6 870 aa25.74■■□□□ 1.71
CCDC187-202ENST00000565954 MARF1Q9Y4F3 1742 aaKnown RBP25.73■■□□□ 1.71
CCDC187-202ENST00000565954 PPM1GO15355 546 aaPredicted RBP25.73■■□□□ 1.71
CCDC187-202ENST00000565954 RRS1Q15050 365 aaKnown RBP25.73■■□□□ 1.71
CCDC187-202ENST00000565954 EMILIN1Q9Y6C2 1016 aa25.72■■□□□ 1.71
CCDC187-202ENST00000565954 PXDNQ92626 1479 aa25.71■■□□□ 1.71
CCDC187-202ENST00000565954 AATKQ6ZMQ8 1374 aa25.71■■□□□ 1.71
CCDC187-202ENST00000565954 PLEKHG5O94827 1062 aa25.71■■□□□ 1.71
CCDC187-202ENST00000565954 CFAP53Q96M91 514 aa25.7■■□□□ 1.71
CCDC187-202ENST00000565954 USP54Q70EL1 1684 aa25.7■■□□□ 1.7
CCDC187-202ENST00000565954 CERKQ8TCT0 537 aa25.68■■□□□ 1.7
CCDC187-202ENST00000565954 ALS2Q96Q42 1657 aa25.68■■□□□ 1.7
CCDC187-202ENST00000565954 SBNO1A3KN83 1393 aa25.67■■□□□ 1.7
CCDC187-202ENST00000565954 ROBO1Q9Y6N7 1651 aa25.67■■□□□ 1.7
CCDC187-202ENST00000565954 WDR43Q15061 677 aaKnown RBP eCLIP25.67■■□□□ 1.7
CCDC187-202ENST00000565954 NHSL1Q5SYE7 1610 aa25.65■■□□□ 1.7
CCDC187-202ENST00000565954 TNS3Q68CZ2 1445 aa25.65■■□□□ 1.7
CCDC187-202ENST00000565954 SOS2Q07890 1332 aaPredicted RBP25.65■■□□□ 1.7
CCDC187-202ENST00000565954 ADAMTS8Q9UP79 889 aa25.65■■□□□ 1.7
CCDC187-202ENST00000565954 SPATA31A3Q5VYP0 1347 aa25.64■■□□□ 1.7
CCDC187-202ENST00000565954 TOM1O60784 492 aa25.64■■□□□ 1.7
CCDC187-202ENST00000565954 SMG6Q86US8 1419 aaKnown RBP25.63■■□□□ 1.69
CCDC187-202ENST00000565954 SHPRHQ149N8 1683 aa25.63■■□□□ 1.69
CCDC187-202ENST00000565954 UBAP1LF5GYI3 381 aa25.63■■□□□ 1.69
CCDC187-202ENST00000565954 COL3A1P02461 1466 aaPredicted RBP25.62■■□□□ 1.69
CCDC187-202ENST00000565954 PNPLA6Q8IY17 1366 aa25.62■■□□□ 1.69
CCDC187-202ENST00000565954 MAP3K19Q56UN5 1328 aa25.62■■□□□ 1.69
CCDC187-202ENST00000565954 PIP4K2BP78356 416 aa25.61■■□□□ 1.69
CCDC187-202ENST00000565954 HNRNPUQ00839 825 aaKnown RBP eCLIP25.61■■□□□ 1.69
CCDC187-202ENST00000565954 IQSEC2Q5JU85 1478 aa25.61■■□□□ 1.69
CCDC187-202ENST00000565954 CDK12Q9NYV4 1490 aaPredicted RBP25.61■■□□□ 1.69
CCDC187-202ENST00000565954 PEAK1Q9H792 1746 aa25.6■■□□□ 1.69
CCDC187-202ENST00000565954 USP19O94966 1318 aa25.59■■□□□ 1.69
CCDC187-202ENST00000565954 SENP3-EIF4A1A0A087X0R7 540 aa25.59■■□□□ 1.69
CCDC187-202ENST00000565954 GCP02774 474 aa25.59■■□□□ 1.69
CCDC187-202ENST00000565954 KCNH5Q8NCM2 988 aa25.59■■□□□ 1.69
CCDC187-202ENST00000565954 DIAPH1O60610 1272 aaKnown RBP25.58■■□□□ 1.69
CCDC187-202ENST00000565954 NFAT5O94916 1531 aa25.58■■□□□ 1.69
CCDC187-202ENST00000565954 SLIT3O75094 1523 aa25.58■■□□□ 1.69
CCDC187-202ENST00000565954 ARHGEF10O15013 1369 aa25.58■■□□□ 1.68
CCDC187-202ENST00000565954 INSRP06213 1382 aa25.58■■□□□ 1.68
CCDC187-202ENST00000565954 MED1Q15648 1581 aaPredicted RBP25.57■■□□□ 1.68
CCDC187-202ENST00000565954 AMPHP49418 695 aa25.57■■□□□ 1.68
CCDC187-202ENST00000565954 CABLES1Q8TDN4 633 aa25.57■■□□□ 1.68
CCDC187-202ENST00000565954 ZBTB7CA1YPR0 619 aa25.56■■□□□ 1.68
CCDC187-202ENST00000565954 U2SURPO15042 1029 aaKnown RBP25.56■■□□□ 1.68
CCDC187-202ENST00000565954 NUDCQ9Y266 331 aa25.56■■□□□ 1.68
CCDC187-202ENST00000565954 LTN1O94822 1766 aa25.55■■□□□ 1.68
CCDC187-202ENST00000565954 HSP90AB2PQ58FF8 381 aa25.55■■□□□ 1.68
CCDC187-202ENST00000565954 U2AF1L5P0DN76 240 aaPredicted RBP25.54■■□□□ 1.68
CCDC187-202ENST00000565954 U2AF1Q01081 240 aaKnown RBP eCLIP25.54■■□□□ 1.68
CCDC187-202ENST00000565954 AHDC1Q5TGY3 1603 aaPredicted RBP25.54■■□□□ 1.68
CCDC187-202ENST00000565954 FLT4P35916 1363 aa25.53■■□□□ 1.68
CCDC187-202ENST00000565954 CCDC146Q8IYE0 955 aa25.52■■□□□ 1.68
CCDC187-202ENST00000565954 PHRF1Q9P1Y6 1649 aaKnown RBP25.52■■□□□ 1.68
CCDC187-202ENST00000565954 BLMP54132 1417 aaPredicted RBP25.52■■□□□ 1.68
CCDC187-202ENST00000565954 IL13P35225 146 aa25.51■■□□□ 1.67
CCDC187-202ENST00000565954 HOXC9P31274 260 aa25.51■■□□□ 1.67
CCDC187-202ENST00000565954 ZC3H6P61129 1189 aaKnown RBP25.51■■□□□ 1.67
CCDC187-202ENST00000565954 EIF4A2Q14240 407 aaKnown RBP25.5■■□□□ 1.67
CCDC187-202ENST00000565954 CRYBG1Q9Y4K1 1723 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms